RNA–Protein interactions for RNA: ENST00000493356.5

PFDN4-205, Transcript of prefoldin subunit 4, humanhuman

TSL 3

Gene PFDN4, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-205ENST00000493356 C6orf48Q9UBA6 75 aa12.84□□□□□ -0.35
PFDN4-205ENST00000493356 TMEM241Q24JQ0 296 aa12.83□□□□□ -0.36
PFDN4-205ENST00000493356 GAGE2EQ4V326 116 aa12.83□□□□□ -0.36
PFDN4-205ENST00000493356 FAM104AQ969W3 186 aa12.83□□□□□ -0.36
PFDN4-205ENST00000493356 GAGE2DQ9UEU5 116 aa12.83□□□□□ -0.36
PFDN4-205ENST00000493356 PPP1R2P9O14990 202 aa12.82□□□□□ -0.36
PFDN4-205ENST00000493356 LINC01551Q86U37 167 aa12.82□□□□□ -0.36
PFDN4-205ENST00000493356 SMDT1Q9H4I9 107 aa12.82□□□□□ -0.36
PFDN4-205ENST00000493356 M0QXV9 152 aa12.81□□□□□ -0.36
PFDN4-205ENST00000493356 RPL39P62891 51 aaKnown RBP12.81□□□□□ -0.36
PFDN4-205ENST00000493356 RIGQ13278 110 aa12.81□□□□□ -0.36
PFDN4-205ENST00000493356 OSTCQ9NRP0 149 aa12.81□□□□□ -0.36
PFDN4-205ENST00000493356 UBE2BP63146 152 aa12.8□□□□□ -0.36
PFDN4-205ENST00000493356 MRPL51Q4U2R6 128 aaKnown RBP12.79□□□□□ -0.36
PFDN4-205ENST00000493356 SMIM7Q9BQ49 75 aa12.79□□□□□ -0.36
PFDN4-205ENST00000493356 C20orf78Q9BR46 151 aa12.77□□□□□ -0.37
PFDN4-205ENST00000493356 CARHSP1Q9Y2V2 147 aaKnown RBP12.77□□□□□ -0.37
PFDN4-205ENST00000493356 V9GYV3 84 aa12.77□□□□□ -0.37
PFDN4-205ENST00000493356 IFITM10A6NMD0 228 aa12.76□□□□□ -0.37
PFDN4-205ENST00000493356 RPL32P62910 135 aaKnown RBP12.76□□□□□ -0.37
PFDN4-205ENST00000493356 MRPS36P82909 103 aaKnown RBP12.76□□□□□ -0.37
PFDN4-205ENST00000493356 KIAA0087Q14695 138 aa12.76□□□□□ -0.37
PFDN4-205ENST00000493356 FAM104BQ5XKR9 115 aa12.76□□□□□ -0.37
PFDN4-205ENST00000493356 SPANXA1Q9NS26 97 aa12.76□□□□□ -0.37
PFDN4-205ENST00000493356 TRBV24-1A0A075B6N3 115 aa12.75□□□□□ -0.37
PFDN4-205ENST00000493356 HBBP68871 147 aa12.75□□□□□ -0.37
PFDN4-205ENST00000493356 BLOC1S1P78537 153 aa12.75□□□□□ -0.37
PFDN4-205ENST00000493356 TCTE3Q8IZS6 198 aa12.75□□□□□ -0.37
PFDN4-205ENST00000493356 TCAPO15273 167 aa12.74□□□□□ -0.37
PFDN4-205ENST00000493356 LCE2AQ5TA79 106 aaPredicted RBP12.74□□□□□ -0.37
PFDN4-205ENST00000493356 LINC00862A6NCI5 91 aa12.73□□□□□ -0.37
PFDN4-205ENST00000493356 ZNF727A8MUV8 499 aa12.73□□□□□ -0.37
PFDN4-205ENST00000493356 C9orf129Q5T035 196 aaKnown RBP12.73□□□□□ -0.37
PFDN4-205ENST00000493356 TGIF2-C20orf24A0A0A6YYL0 155 aa12.72□□□□□ -0.37
PFDN4-205ENST00000493356 TRBV30A0A0K0K1B3 111 aa12.72□□□□□ -0.37
PFDN4-205ENST00000493356 NDUFC2-KCTD14E9PQ53 114 aa12.72□□□□□ -0.37
PFDN4-205ENST00000493356 ZNF861PO60384 105 aa12.72□□□□□ -0.37
PFDN4-205ENST00000493356 ALKAL2Q6UX46 152 aa12.72□□□□□ -0.37
PFDN4-205ENST00000493356 SMIM2Q9BVW6 85 aa12.72□□□□□ -0.37
PFDN4-205ENST00000493356 NAT8BQ9UHF3 227 aa12.72□□□□□ -0.37
PFDN4-205ENST00000493356 TNFRSF6BO95407 300 aa12.71□□□□□ -0.37
PFDN4-205ENST00000493356 TSPAN13O95857 204 aa12.71□□□□□ -0.37
PFDN4-205ENST00000493356 CKS2P33552 79 aa12.71□□□□□ -0.37
PFDN4-205ENST00000493356 C2orf82Q6UX34 121 aa12.71□□□□□ -0.37
PFDN4-205ENST00000493356 EIF5A2Q9GZV4 153 aaKnown RBP12.7□□□□□ -0.38
PFDN4-205ENST00000493356 FAT4Q6V0I7 4981 aa12.68□□□□□ -0.38
PFDN4-205ENST00000493356 LINC00242Q5T6M2 205 aa12.68□□□□□ -0.38
PFDN4-205ENST00000493356 PACRGQ96M98 296 aaPredicted RBP12.68□□□□□ -0.38
PFDN4-205ENST00000493356 SRP19P09132 144 aaKnown RBP12.67□□□□□ -0.38
PFDN4-205ENST00000493356 FAM74A3Q4VXF1 159 aa12.67□□□□□ -0.38
PFDN4-205ENST00000493356 A0A087X002 238 aa12.65□□□□□ -0.38
PFDN4-205ENST00000493356 D6R8Y8 96 aa12.65□□□□□ -0.38
PFDN4-205ENST00000493356 NPYP01303 97 aa12.65□□□□□ -0.38
PFDN4-205ENST00000493356 A0A1B0GW15 77 aa12.64□□□□□ -0.39
PFDN4-205ENST00000493356 SMIM27A0A1W2PRY6 76 aa12.64□□□□□ -0.39
PFDN4-205ENST00000493356 NUPR1O60356 82 aa12.64□□□□□ -0.39
PFDN4-205ENST00000493356 IFI27P40305 119 aaPredicted RBP12.64□□□□□ -0.39
PFDN4-205ENST00000493356 IGLV4-3A0A075B6K6 122 aa12.63□□□□□ -0.39
PFDN4-205ENST00000493356 KRTAP9-6A0A140TA67 174 aa12.63□□□□□ -0.39
PFDN4-205ENST00000493356 RPL23P62829 140 aaKnown RBP12.63□□□□□ -0.39
PFDN4-205ENST00000493356 PYGO1Q9Y3Y4 419 aa12.63□□□□□ -0.39
PFDN4-205ENST00000493356 C22orf24Q9Y442 160 aa12.63□□□□□ -0.39
PFDN4-205ENST00000493356 CTDSP1Q9GZU7 261 aa12.62□□□□□ -0.39
PFDN4-205ENST00000493356 LINC01561Q8N1V8 128 aa12.61□□□□□ -0.39
PFDN4-205ENST00000493356 LINC00469Q8N7U9 141 aa12.61□□□□□ -0.39
PFDN4-205ENST00000493356 TMEM141Q96I45 108 aa12.6□□□□□ -0.39
PFDN4-205ENST00000493356 ADIRFQ15847 76 aa12.59□□□□□ -0.39
PFDN4-205ENST00000493356 LBHQ53QV2 105 aaPredicted RBP12.59□□□□□ -0.39
PFDN4-205ENST00000493356 TYMSOSQ8TAI1 123 aa12.59□□□□□ -0.39
PFDN4-205ENST00000493356 F8W036 122 aa12.58□□□□□ -0.4
PFDN4-205ENST00000493356 PPBPP02775 128 aa12.58□□□□□ -0.4
PFDN4-205ENST00000493356 CRYGAP11844 174 aa12.58□□□□□ -0.4
PFDN4-205ENST00000493356 RAB5AP20339 215 aa12.58□□□□□ -0.4
PFDN4-205ENST00000493356 MRPL54Q6P161 138 aaKnown RBP12.58□□□□□ -0.4
PFDN4-205ENST00000493356 XAGE1AQ9HD64 81 aa12.58□□□□□ -0.4
PFDN4-205ENST00000493356 RPL28P46779 137 aaKnown RBP12.57□□□□□ -0.4
PFDN4-205ENST00000493356 TEX43Q6ZNM6 134 aa12.57□□□□□ -0.4
PFDN4-205ENST00000493356 A0A1B0GXF2 115 aa12.56□□□□□ -0.4
PFDN4-205ENST00000493356 S100A8P05109 93 aa12.56□□□□□ -0.4
PFDN4-205ENST00000493356 PRSS2P07478 247 aa12.56□□□□□ -0.4
PFDN4-205ENST00000493356 CKS1BP61024 79 aa12.56□□□□□ -0.4
PFDN4-205ENST00000493356 TOMM7Q9P0U1 55 aa12.56□□□□□ -0.4
PFDN4-205ENST00000493356 BCE1O60756 84 aa12.55□□□□□ -0.4
PFDN4-205ENST00000493356 Q6ZN92 141 aa12.55□□□□□ -0.4
PFDN4-205ENST00000493356 ZC2HC1BQ5TFG8 222 aa12.54□□□□□ -0.4
PFDN4-205ENST00000493356 MRPL55Q7Z7F7 128 aaKnown RBP12.54□□□□□ -0.4
PFDN4-205ENST00000493356 ORMDL3Q8N138 153 aa12.54□□□□□ -0.4
PFDN4-205ENST00000493356 C2orf88Q9BSF0 95 aa12.54□□□□□ -0.4
PFDN4-205ENST00000493356 TP73-AS1Q9UF72 201 aa12.54□□□□□ -0.4
PFDN4-205ENST00000493356 NAT8Q9UHE5 227 aa12.54□□□□□ -0.4
PFDN4-205ENST00000493356 C6orf226Q5I0X4 101 aa12.53□□□□□ -0.4
PFDN4-205ENST00000493356 LINC00173Q6ZV60 143 aa12.53□□□□□ -0.4
PFDN4-205ENST00000493356 Q8IZM0 81 aa12.53□□□□□ -0.4
PFDN4-205ENST00000493356 TMEM136Q6ZRR5 245 aa12.52□□□□□ -0.41
PFDN4-205ENST00000493356 PRELID3AQ96N28 172 aa12.52□□□□□ -0.41
PFDN4-205ENST00000493356 RETNLBQ9BQ08 111 aa12.52□□□□□ -0.41
PFDN4-205ENST00000493356 ANAPC11Q9NYG5 84 aa12.52□□□□□ -0.41
PFDN4-205ENST00000493356 C9JQL5 133 aa12.51□□□□□ -0.41
PFDN4-205ENST00000493356 AMELXQ99217 191 aa12.51□□□□□ -0.41
PFDN4-205ENST00000493356 ALKBH7Q9BT30 221 aaPredicted RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 200.7 ms