RNA–Protein interactions for RNA: ENST00000493232.5

BRAT1-206, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,360 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-206ENST00000493232 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.88□□□□□ -0.51
BRAT1-206ENST00000493232 PPDPFQ9H3Y8 114 aa11.88□□□□□ -0.51
BRAT1-206ENST00000493232 M0R2N4 97 aa11.88□□□□□ -0.51
BRAT1-206ENST00000493232 CRIP2P52943 208 aaPredicted RBP11.88□□□□□ -0.51
BRAT1-206ENST00000493232 A0A0J9YWU9 116 aa11.87□□□□□ -0.51
BRAT1-206ENST00000493232 MRPS12O15235 138 aaKnown RBP11.87□□□□□ -0.51
BRAT1-206ENST00000493232 SRCAPQ6ZRS2 3230 aa11.87□□□□□ -0.51
BRAT1-206ENST00000493232 SMIM11BQ8TCY0 68 aa11.87□□□□□ -0.51
BRAT1-206ENST00000493232 BRK1Q8WUW1 75 aa11.87□□□□□ -0.51
BRAT1-206ENST00000493232 NANOS2P60321 138 aaKnown RBP11.87□□□□□ -0.51
BRAT1-206ENST00000493232 AVPP01185 164 aa11.87□□□□□ -0.51
BRAT1-206ENST00000493232 ODF3L2Q3SX64 289 aa11.87□□□□□ -0.51
BRAT1-206ENST00000493232 NDUFC1O43677 76 aa11.86□□□□□ -0.51
BRAT1-206ENST00000493232 LY6G6CO95867 125 aa11.86□□□□□ -0.51
BRAT1-206ENST00000493232 ATP5EP56381 51 aaPredicted RBP11.86□□□□□ -0.51
BRAT1-206ENST00000493232 IMUPQ9GZP8 106 aa11.86□□□□□ -0.51
BRAT1-206ENST00000493232 HIVEP3Q5T1R4 2406 aa11.86□□□□□ -0.51
BRAT1-206ENST00000493232 PLAC8L1A1L4L8 177 aa11.86□□□□□ -0.51
BRAT1-206ENST00000493232 CDSNQ15517 529 aa11.86□□□□□ -0.51
BRAT1-206ENST00000493232 PRR15LQ9BU68 103 aa11.85□□□□□ -0.51
BRAT1-206ENST00000493232 SPINK6Q6UWN8 80 aa11.85□□□□□ -0.51
BRAT1-206ENST00000493232 SVIPQ8NHG7 77 aa11.85□□□□□ -0.51
BRAT1-206ENST00000493232 MUC22E2RYF6 1773 aaPredicted RBP11.85□□□□□ -0.51
BRAT1-206ENST00000493232 FAM19A3Q7Z5A8 133 aa11.85□□□□□ -0.51
BRAT1-206ENST00000493232 OXLD1Q5BKU9 147 aa11.84□□□□□ -0.51
BRAT1-206ENST00000493232 C2orf91Q6ZV80 131 aa11.84□□□□□ -0.51
BRAT1-206ENST00000493232 NUPR2A6NF83 97 aa11.84□□□□□ -0.51
BRAT1-206ENST00000493232 CYSRT1A8MQ03 144 aa11.84□□□□□ -0.51
BRAT1-206ENST00000493232 V9GYY9 64 aa11.84□□□□□ -0.51
BRAT1-206ENST00000493232 KIAA1549Q9HCM3 1950 aa11.84□□□□□ -0.51
BRAT1-206ENST00000493232 MYO18BQ8IUG5 2567 aa11.83□□□□□ -0.52
BRAT1-206ENST00000493232 IGLV1-51P01701 117 aa11.83□□□□□ -0.52
BRAT1-206ENST00000493232 PRM2P04554 102 aa11.83□□□□□ -0.52
BRAT1-206ENST00000493232 EGFEM1PQ0D2K5 195 aa11.83□□□□□ -0.52
BRAT1-206ENST00000493232 IGIPA6NJ69 53 aa11.83□□□□□ -0.52
BRAT1-206ENST00000493232 BRI3O95415 125 aa11.83□□□□□ -0.52
BRAT1-206ENST00000493232 ZNF580Q9UK33 172 aa11.83□□□□□ -0.52
BRAT1-206ENST00000493232 RPL37AP8A6NKH3 93 aa11.83□□□□□ -0.52
BRAT1-206ENST00000493232 NDUFC2-KCTD14E9PQ53 114 aa11.82□□□□□ -0.52
BRAT1-206ENST00000493232 PCNX3Q9H6A9 2034 aa11.82□□□□□ -0.52
BRAT1-206ENST00000493232 SPTSSBQ8NFR3 76 aa11.82□□□□□ -0.52
BRAT1-206ENST00000493232 WFDC13Q8IUB5 93 aa11.81□□□□□ -0.52
BRAT1-206ENST00000493232 SERP2Q8N6R1 65 aa11.81□□□□□ -0.52
BRAT1-206ENST00000493232 LINC00242Q5T6M2 205 aa11.81□□□□□ -0.52
BRAT1-206ENST00000493232 MRPL55Q7Z7F7 128 aaKnown RBP11.81□□□□□ -0.52
BRAT1-206ENST00000493232 POM121L12Q8N7R1 296 aa11.81□□□□□ -0.52
BRAT1-206ENST00000493232 GAS8-AS1O95177 125 aa11.8□□□□□ -0.52
BRAT1-206ENST00000493232 MPLKIPQ8TAP9 179 aa11.8□□□□□ -0.52
BRAT1-206ENST00000493232 FAM240AA0A1B0GVK7 77 aa11.79□□□□□ -0.52
BRAT1-206ENST00000493232 C16orf95Q9H693 158 aa11.79□□□□□ -0.52
BRAT1-206ENST00000493232 Q8N9L7 120 aa11.79□□□□□ -0.52
BRAT1-206ENST00000493232 CCDC168Q8NDH2 2452 aa11.79□□□□□ -0.52
BRAT1-206ENST00000493232 IGLV9-49A0A0B4J1Y8 123 aa11.78□□□□□ -0.52
BRAT1-206ENST00000493232 HRCT1Q6UXD1 115 aa11.78□□□□□ -0.52
BRAT1-206ENST00000493232 RPL28P46779 137 aaKnown RBP11.78□□□□□ -0.52
BRAT1-206ENST00000493232 CEP192Q8TEP8 1941 aa11.78□□□□□ -0.52
BRAT1-206ENST00000493232 C10orf25Q5T742 122 aa11.77□□□□□ -0.53
BRAT1-206ENST00000493232 IGF2RP11717 2491 aa11.77□□□□□ -0.53
BRAT1-206ENST00000493232 KRTAP10-9P60411 292 aa11.76□□□□□ -0.53
BRAT1-206ENST00000493232 M0QXV9 152 aa11.76□□□□□ -0.53
BRAT1-206ENST00000493232 SMIM1B2RUZ4 78 aa11.76□□□□□ -0.53
BRAT1-206ENST00000493232 UNQ6190/PRO20217Q6UXQ8 127 aa11.76□□□□□ -0.53
BRAT1-206ENST00000493232 Q6JHZ5 121 aa11.75□□□□□ -0.53
BRAT1-206ENST00000493232 PLXNB1O43157 2135 aa11.75□□□□□ -0.53
BRAT1-206ENST00000493232 EDN2P20800 178 aa11.74□□□□□ -0.53
BRAT1-206ENST00000493232 SMR3AQ99954 134 aa11.74□□□□□ -0.53
BRAT1-206ENST00000493232 F8WDY8 70 aa11.74□□□□□ -0.53
BRAT1-206ENST00000493232 NTM-AS1Q6ZSK4 140 aa11.74□□□□□ -0.53
BRAT1-206ENST00000493232 CSDC2Q9Y534 153 aaKnown RBP11.74□□□□□ -0.53
BRAT1-206ENST00000493232 COX8CQ7Z4L0 72 aa11.73□□□□□ -0.53
BRAT1-206ENST00000493232 SERP1Q9Y6X1 66 aa11.73□□□□□ -0.53
BRAT1-206ENST00000493232 FHL2Q14192 279 aa11.72□□□□□ -0.53
BRAT1-206ENST00000493232 RETNQ9HD89 108 aa11.71□□□□□ -0.53
BRAT1-206ENST00000493232 REG3GQ6UW15 175 aa11.71□□□□□ -0.54
BRAT1-206ENST00000493232 HCFC1P51610 2035 aa11.7□□□□□ -0.54
BRAT1-206ENST00000493232 SNURFQ9Y675 71 aa11.7□□□□□ -0.54
BRAT1-206ENST00000493232 TRBV10-3A0A0K0K1G6 114 aa11.7□□□□□ -0.54
BRAT1-206ENST00000493232 COX7CP15954 63 aa11.7□□□□□ -0.54
BRAT1-206ENST00000493232 LRP4O75096 1905 aa11.7□□□□□ -0.54
BRAT1-206ENST00000493232 BEAN1Q3B7T3 259 aa11.69□□□□□ -0.54
BRAT1-206ENST00000493232 Q8N814 137 aa11.69□□□□□ -0.54
BRAT1-206ENST00000493232 C6orf223Q8N319 242 aa11.69□□□□□ -0.54
BRAT1-206ENST00000493232 C2CD3Q4AC94 2353 aa11.68□□□□□ -0.54
BRAT1-206ENST00000493232 Q6ZTC4 211 aa11.68□□□□□ -0.54
BRAT1-206ENST00000493232 IGLV4-60A0A075B6I1 120 aa11.68□□□□□ -0.54
BRAT1-206ENST00000493232 C1orf137Q5JT78 98 aa11.68□□□□□ -0.54
BRAT1-206ENST00000493232 AMELXQ99217 191 aa11.68□□□□□ -0.54
BRAT1-206ENST00000493232 ABCA2Q9BZC7 2435 aa11.67□□□□□ -0.54
BRAT1-206ENST00000493232 PRRC2AP48634 2157 aaKnown RBP11.67□□□□□ -0.54
BRAT1-206ENST00000493232 TANC2Q9HCD6 1990 aa11.67□□□□□ -0.54
BRAT1-206ENST00000493232 URB1-AS1Q96HZ7 61 aa11.67□□□□□ -0.54
BRAT1-206ENST00000493232 IGLV5-52A0A0A0MRZ9 124 aa11.66□□□□□ -0.54
BRAT1-206ENST00000493232 A0A1W2PPR1 153 aa11.66□□□□□ -0.54
BRAT1-206ENST00000493232 LINC00694P0DN24 101 aa11.66□□□□□ -0.54
BRAT1-206ENST00000493232 COX6A2Q02221 97 aa11.66□□□□□ -0.54
BRAT1-206ENST00000493232 A0A1B0GUV1 79 aa11.65□□□□□ -0.54
BRAT1-206ENST00000493232 C9orf116Q5BN46 136 aaPredicted RBP11.65□□□□□ -0.54
BRAT1-206ENST00000493232 C2orf48Q96LS8 159 aa11.65□□□□□ -0.54
BRAT1-206ENST00000493232 PTPRSQ13332 1948 aa11.65□□□□□ -0.54
BRAT1-206ENST00000493232 ATG2AQ2TAZ0 1938 aa11.65□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms