RNA–Protein interactions for RNA: ENST00000492728.1

CHD1L-209, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2

Gene CHD1L, Length 662 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-209ENST00000492728 SMAGPQ0VAQ4 97 aa11.41□□□□□ -0.58
CHD1L-209ENST00000492728 APOMO95445 188 aa11.4□□□□□ -0.58
CHD1L-209ENST00000492728 SRSF9Q13242 221 aaKnown RBP eCLIP11.4□□□□□ -0.58
CHD1L-209ENST00000492728 TMEM18Q96B42 140 aa11.4□□□□□ -0.58
CHD1L-209ENST00000492728 C2orf48Q96LS8 159 aa11.4□□□□□ -0.58
CHD1L-209ENST00000492728 SMDT1Q9H4I9 107 aa11.4□□□□□ -0.58
CHD1L-209ENST00000492728 IGHV3OR16-9A0A0B4J2B5 98 aa11.38□□□□□ -0.59
CHD1L-209ENST00000492728 RPL18AQ02543 176 aaKnown RBP11.38□□□□□ -0.59
CHD1L-209ENST00000492728 SPINK6Q6UWN8 80 aa11.38□□□□□ -0.59
CHD1L-209ENST00000492728 Q6ZRP5 223 aa11.38□□□□□ -0.59
CHD1L-209ENST00000492728 SPANXA1Q9NS26 97 aa11.38□□□□□ -0.59
CHD1L-209ENST00000492728 MRPS36P82909 103 aaKnown RBP11.37□□□□□ -0.59
CHD1L-209ENST00000492728 C9orf116Q5BN46 136 aaPredicted RBP11.37□□□□□ -0.59
CHD1L-209ENST00000492728 C10orf25Q5T742 122 aa11.37□□□□□ -0.59
CHD1L-209ENST00000492728 F8W036 122 aa11.36□□□□□ -0.59
CHD1L-209ENST00000492728 S100A8P05109 93 aa11.36□□□□□ -0.59
CHD1L-209ENST00000492728 KRTAP10-8P60410 259 aa11.36□□□□□ -0.59
CHD1L-209ENST00000492728 OR10D4PQ8NGN7 298 aa11.36□□□□□ -0.59
CHD1L-209ENST00000492728 ORAOV1Q8WV07 137 aa11.36□□□□□ -0.59
CHD1L-209ENST00000492728 IFITM10A6NMD0 228 aa11.35□□□□□ -0.59
CHD1L-209ENST00000492728 PHF5AQ7RTV0 110 aaKnown RBP11.35□□□□□ -0.59
CHD1L-209ENST00000492728 ORMDL3Q8N138 153 aa11.34□□□□□ -0.59
CHD1L-209ENST00000492728 PSORS1C2Q9UIG4 136 aa11.34□□□□□ -0.59
CHD1L-209ENST00000492728 PPBPP02775 128 aa11.33□□□□□ -0.6
CHD1L-209ENST00000492728 RNF151Q2KHN1 245 aa11.33□□□□□ -0.6
CHD1L-209ENST00000492728 TMEM136Q6ZRR5 245 aa11.33□□□□□ -0.6
CHD1L-209ENST00000492728 ATP5L2Q7Z4Y8 100 aa11.33□□□□□ -0.6
CHD1L-209ENST00000492728 PRELID3AQ96N28 172 aa11.33□□□□□ -0.6
CHD1L-209ENST00000492728 MRPL35Q9NZE8 188 aaKnown RBP11.33□□□□□ -0.6
CHD1L-209ENST00000492728 IGLV4-3A0A075B6K6 122 aa11.32□□□□□ -0.6
CHD1L-209ENST00000492728 UNQ6190/PRO20217Q6UXQ8 127 aa11.32□□□□□ -0.6
CHD1L-209ENST00000492728 KRTAP11-1Q8IUC1 163 aa11.32□□□□□ -0.6
CHD1L-209ENST00000492728 C6orf48Q9UBA6 75 aa11.32□□□□□ -0.6
CHD1L-209ENST00000492728 FAM168BA1KXE4 195 aa11.31□□□□□ -0.6
CHD1L-209ENST00000492728 KIAA0087Q14695 138 aa11.31□□□□□ -0.6
CHD1L-209ENST00000492728 REG3GQ6UW15 175 aa11.31□□□□□ -0.6
CHD1L-209ENST00000492728 RNF213Q63HN8 5207 aa11.3□□□□□ -0.6
CHD1L-209ENST00000492728 LINC00242Q5T6M2 205 aa11.3□□□□□ -0.6
CHD1L-209ENST00000492728 PRSS47A8MTI9 375 aa11.29□□□□□ -0.6
CHD1L-209ENST00000492728 NDUFA1O15239 70 aa11.29□□□□□ -0.6
CHD1L-209ENST00000492728 NDUFA5Q16718 116 aa11.29□□□□□ -0.6
CHD1L-209ENST00000492728 ZC2HC1BQ5TFG8 222 aa11.29□□□□□ -0.6
CHD1L-209ENST00000492728 KRTAP7-1Q8IUC3 87 aa11.29□□□□□ -0.6
CHD1L-209ENST00000492728 PYGO1Q9Y3Y4 419 aa11.29□□□□□ -0.6
CHD1L-209ENST00000492728 A0A087WZ39 114 aa11.28□□□□□ -0.6
CHD1L-209ENST00000492728 LOC389332A0A1B0GUA5 103 aa11.28□□□□□ -0.6
CHD1L-209ENST00000492728 RAB5AP20339 215 aa11.28□□□□□ -0.6
CHD1L-209ENST00000492728 IFI27P40305 119 aaPredicted RBP11.28□□□□□ -0.6
CHD1L-209ENST00000492728 MT-ND6P03923 174 aa11.27□□□□□ -0.61
CHD1L-209ENST00000492728 TLX1NBP0CAT3 122 aa11.27□□□□□ -0.61
CHD1L-209ENST00000492728 LINC00173Q6ZV60 143 aa11.27□□□□□ -0.61
CHD1L-209ENST00000492728 TGIF2-C20orf24A0A0A6YYL0 155 aa11.26□□□□□ -0.61
CHD1L-209ENST00000492728 F8WDY8 70 aa11.26□□□□□ -0.61
CHD1L-209ENST00000492728 UBE2D1P51668 147 aa11.26□□□□□ -0.61
CHD1L-209ENST00000492728 C1orf137Q5JT78 98 aa11.26□□□□□ -0.61
CHD1L-209ENST00000492728 CLLU1Q5K131 121 aa11.26□□□□□ -0.61
CHD1L-209ENST00000492728 TMEM141Q96I45 108 aa11.26□□□□□ -0.61
CHD1L-209ENST00000492728 C2orf82Q6UX34 121 aa11.25□□□□□ -0.61
CHD1L-209ENST00000492728 FAM19A5Q7Z5A7 132 aaPredicted RBP11.25□□□□□ -0.61
CHD1L-209ENST00000492728 IMMP2LQ96T52 175 aa11.25□□□□□ -0.61
CHD1L-209ENST00000492728 MAP1LC3AQ9H492 121 aa11.25□□□□□ -0.61
CHD1L-209ENST00000492728 PNRC1Q12796 327 aaPredicted RBP11.24□□□□□ -0.61
CHD1L-209ENST00000492728 GAGE2EQ4V326 116 aa11.24□□□□□ -0.61
CHD1L-209ENST00000492728 C2orf66Q6UXQ4 117 aa11.24□□□□□ -0.61
CHD1L-209ENST00000492728 Q8N8P6 123 aa11.24□□□□□ -0.61
CHD1L-209ENST00000492728 GAGE2DQ9UEU5 116 aa11.24□□□□□ -0.61
CHD1L-209ENST00000492728 LAMTOR2Q9Y2Q5 125 aa11.24□□□□□ -0.61
CHD1L-209ENST00000492728 RAB14P61106 215 aa11.22□□□□□ -0.61
CHD1L-209ENST00000492728 TEX43Q6ZNM6 134 aa11.22□□□□□ -0.61
CHD1L-209ENST00000492728 ANAPC16Q96DE5 110 aa11.22□□□□□ -0.61
CHD1L-209ENST00000492728 AMELXQ99217 191 aa11.22□□□□□ -0.61
CHD1L-209ENST00000492728 MT-ND4LP03901 98 aa11.21□□□□□ -0.61
CHD1L-209ENST00000492728 IGLV7-43P04211 117 aa11.21□□□□□ -0.61
CHD1L-209ENST00000492728 CYSLTR1Q9Y271 337 aa11.21□□□□□ -0.61
CHD1L-209ENST00000492728 LPAP08519 4548 aa11.21□□□□□ -0.62
CHD1L-209ENST00000492728 IGIPA6NJ69 53 aa11.2□□□□□ -0.62
CHD1L-209ENST00000492728 C9orf129Q5T035 196 aaKnown RBP11.2□□□□□ -0.62
CHD1L-209ENST00000492728 TRBV30A0A0K0K1B3 111 aa11.19□□□□□ -0.62
CHD1L-209ENST00000492728 ADCYAP1P18509 176 aa11.19□□□□□ -0.62
CHD1L-209ENST00000492728 M0QXV9 152 aa11.18□□□□□ -0.62
CHD1L-209ENST00000492728 ATP6V1G1O75348 118 aa11.18□□□□□ -0.62
CHD1L-209ENST00000492728 LINC01561Q8N1V8 128 aa11.18□□□□□ -0.62
CHD1L-209ENST00000492728 C2orf88Q9BSF0 95 aa11.18□□□□□ -0.62
CHD1L-209ENST00000492728 NDUFC2-KCTD14E9PQ53 114 aa11.17□□□□□ -0.62
CHD1L-209ENST00000492728 ORMDL2Q53FV1 153 aa11.17□□□□□ -0.62
CHD1L-209ENST00000492728 Q6ZN92 141 aa11.16□□□□□ -0.62
CHD1L-209ENST00000492728 FAM19A3Q7Z5A8 133 aa11.16□□□□□ -0.62
CHD1L-209ENST00000492728 PRR26Q8N8Z3 221 aa11.16□□□□□ -0.62
CHD1L-209ENST00000492728 VCX2Q9H322 139 aa11.16□□□□□ -0.62
CHD1L-209ENST00000492728 H0Y9J4 135 aa11.15□□□□□ -0.62
CHD1L-209ENST00000492728 KIAA1644Q3SXP7 199 aa11.15□□□□□ -0.62
CHD1L-209ENST00000492728 SLC7A5P1Q8MH63 180 aa11.15□□□□□ -0.62
CHD1L-209ENST00000492728 DIRC1Q969H9 104 aa11.15□□□□□ -0.62
CHD1L-209ENST00000492728 KRTAP1-4P0C5Y4 121 aa11.14□□□□□ -0.63
CHD1L-209ENST00000492728 PACRGQ96M98 296 aaPredicted RBP11.14□□□□□ -0.63
CHD1L-209ENST00000492728 CTDSP1Q9GZU7 261 aa11.14□□□□□ -0.63
CHD1L-209ENST00000492728 NXT2Q9NPJ8 142 aaKnown RBP11.14□□□□□ -0.63
CHD1L-209ENST00000492728 TOMM7Q9P0U1 55 aa11.14□□□□□ -0.63
CHD1L-209ENST00000492728 K7EMI3 77 aa11.13□□□□□ -0.63
CHD1L-209ENST00000492728 NPSP0C0P6 89 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms