RNA–Protein interactions for RNA: ENST00000492512.1

GPNMB-213, Transcript of glycoprotein nmb, humanhuman

TSL 3

Gene GPNMB, Length 447 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-213ENST00000492512 RPP21Q9H633 154 aaKnown RBP8.23□□□□□ -1.09
GPNMB-213ENST00000492512 PPP1R2P9O14990 202 aa8.22□□□□□ -1.09
GPNMB-213ENST00000492512 RNF151Q2KHN1 245 aa8.22□□□□□ -1.09
GPNMB-213ENST00000492512 C5orf38Q86SI9 138 aa8.22□□□□□ -1.09
GPNMB-213ENST00000492512 KRTAP11-1Q8IUC1 163 aa8.22□□□□□ -1.09
GPNMB-213ENST00000492512 ST20Q9HBF5 79 aa8.22□□□□□ -1.09
GPNMB-213ENST00000492512 RAB5AP20339 215 aa8.21□□□□□ -1.1
GPNMB-213ENST00000492512 RAB5BP61020 215 aa8.21□□□□□ -1.1
GPNMB-213ENST00000492512 SPAG11BQ08648 103 aa8.21□□□□□ -1.1
GPNMB-213ENST00000492512 YPEL4Q96NS1 127 aa8.21□□□□□ -1.1
GPNMB-213ENST00000492512 RNASE7Q9H1E1 156 aaKnown RBP8.21□□□□□ -1.1
GPNMB-213ENST00000492512 LOC105371267A0A1B0GV96 52 aa8.2□□□□□ -1.1
GPNMB-213ENST00000492512 FAM168BA1KXE4 195 aa8.2□□□□□ -1.1
GPNMB-213ENST00000492512 S100PP25815 95 aa8.2□□□□□ -1.1
GPNMB-213ENST00000492512 IMMP2LQ96T52 175 aa8.2□□□□□ -1.1
GPNMB-213ENST00000492512 TRAV13-1A0A0B4J241 112 aa8.19□□□□□ -1.1
GPNMB-213ENST00000492512 RNASE13Q5GAN3 156 aaKnown RBP8.19□□□□□ -1.1
GPNMB-213ENST00000492512 FAM19A5Q7Z5A7 132 aaPredicted RBP8.19□□□□□ -1.1
GPNMB-213ENST00000492512 LINC01551Q86U37 167 aa8.19□□□□□ -1.1
GPNMB-213ENST00000492512 TRBV24-1A0A075B6N3 115 aa8.18□□□□□ -1.1
GPNMB-213ENST00000492512 TSPAN13O95857 204 aa8.18□□□□□ -1.1
GPNMB-213ENST00000492512 POLR2KP53803 58 aaKnown RBP8.18□□□□□ -1.1
GPNMB-213ENST00000492512 UBE2BP63146 152 aa8.18□□□□□ -1.1
GPNMB-213ENST00000492512 SMAGPQ0VAQ4 97 aa8.18□□□□□ -1.1
GPNMB-213ENST00000492512 OR10D4PQ8NGN7 298 aa8.18□□□□□ -1.1
GPNMB-213ENST00000492512 MRPL35Q9NZE8 188 aaKnown RBP8.18□□□□□ -1.1
GPNMB-213ENST00000492512 TRBV27A0A0K0K1C4 114 aa8.17□□□□□ -1.1
GPNMB-213ENST00000492512 FCER1GP30273 86 aa8.17□□□□□ -1.1
GPNMB-213ENST00000492512 CSDC2Q9Y534 153 aaKnown RBP8.17□□□□□ -1.1
GPNMB-213ENST00000492512 K7EN84 100 aa8.16□□□□□ -1.1
GPNMB-213ENST00000492512 NDUFA1O15239 70 aa8.16□□□□□ -1.1
GPNMB-213ENST00000492512 OCC1Q8TAD7 63 aa8.16□□□□□ -1.1
GPNMB-213ENST00000492512 ORAOV1Q8WV07 137 aa8.16□□□□□ -1.1
GPNMB-213ENST00000492512 UBE2D4Q9Y2X8 147 aa8.16□□□□□ -1.1
GPNMB-213ENST00000492512 TRAV9-1A0A075B6T8 112 aa8.15□□□□□ -1.1
GPNMB-213ENST00000492512 F8WDY8 70 aa8.15□□□□□ -1.1
GPNMB-213ENST00000492512 M0QXV9 152 aa8.15□□□□□ -1.1
GPNMB-213ENST00000492512 TLX1NBP0CAT3 122 aa8.15□□□□□ -1.1
GPNMB-213ENST00000492512 GAGE2EQ4V326 116 aa8.15□□□□□ -1.1
GPNMB-213ENST00000492512 BORCS7Q96B45 105 aa8.15□□□□□ -1.1
GPNMB-213ENST00000492512 GAGE2DQ9UEU5 116 aa8.15□□□□□ -1.1
GPNMB-213ENST00000492512 TGIF2-C20orf24A0A0A6YYL0 155 aa8.14□□□□□ -1.11
GPNMB-213ENST00000492512 A8MWL6 223 aa8.14□□□□□ -1.11
GPNMB-213ENST00000492512 VCYO14598 125 aa8.14□□□□□ -1.11
GPNMB-213ENST00000492512 GATCO43716 136 aaKnown RBP8.14□□□□□ -1.11
GPNMB-213ENST00000492512 C10orf25Q5T742 122 aa8.14□□□□□ -1.11
GPNMB-213ENST00000492512 Q6ZUT4 128 aa8.14□□□□□ -1.11
GPNMB-213ENST00000492512 OSTCQ9NRP0 149 aa8.14□□□□□ -1.11
GPNMB-213ENST00000492512 UNQ6190/PRO20217Q6UXQ8 127 aa8.13□□□□□ -1.11
GPNMB-213ENST00000492512 TMEM191AQ9H0A3 160 aa8.13□□□□□ -1.11
GPNMB-213ENST00000492512 S100A6P06703 90 aa8.12□□□□□ -1.11
GPNMB-213ENST00000492512 RAB4AP20338 218 aa8.12□□□□□ -1.11
GPNMB-213ENST00000492512 KRTAP7-1Q8IUC3 87 aa8.12□□□□□ -1.11
GPNMB-213ENST00000492512 C6orf48Q9UBA6 75 aa8.12□□□□□ -1.11
GPNMB-213ENST00000492512 A0A1B0GUT8 65 aa8.11□□□□□ -1.11
GPNMB-213ENST00000492512 FAM231DQ6ZW35 169 aa8.11□□□□□ -1.11
GPNMB-213ENST00000492512 TMEM18Q96B42 140 aa8.11□□□□□ -1.11
GPNMB-213ENST00000492512 KIR2DL4Q99706 377 aa8.11□□□□□ -1.11
GPNMB-213ENST00000492512 TIMM21Q9BVV7 248 aa8.11□□□□□ -1.11
GPNMB-213ENST00000492512 IGHV3OR16-9A0A0B4J2B5 98 aa8.1□□□□□ -1.11
GPNMB-213ENST00000492512 SMKR1H3BMG3 65 aa8.1□□□□□ -1.11
GPNMB-213ENST00000492512 ZNF861PO60384 105 aa8.1□□□□□ -1.11
GPNMB-213ENST00000492512 AMN1Q8IY45 258 aa8.1□□□□□ -1.11
GPNMB-213ENST00000492512 SUMO2P61956 95 aaKnown RBP8.09□□□□□ -1.11
GPNMB-213ENST00000492512 COX19Q49B96 90 aa8.09□□□□□ -1.11
GPNMB-213ENST00000492512 CT83Q5H943 113 aa8.09□□□□□ -1.11
GPNMB-213ENST00000492512 V9GYV3 84 aa8.09□□□□□ -1.11
GPNMB-213ENST00000492512 C5orf52A6NGY3 159 aa8.08□□□□□ -1.12
GPNMB-213ENST00000492512 PPP1R17O96001 155 aa8.08□□□□□ -1.12
GPNMB-213ENST00000492512 HIGD1CA8MV81 97 aa8.07□□□□□ -1.12
GPNMB-213ENST00000492512 TRGC2P03986 189 aa8.07□□□□□ -1.12
GPNMB-213ENST00000492512 NRACQ8N912 160 aa8.07□□□□□ -1.12
GPNMB-213ENST00000492512 TYMSOSQ8TAI1 123 aa8.07□□□□□ -1.12
GPNMB-213ENST00000492512 A0A087X002 238 aa8.06□□□□□ -1.12
GPNMB-213ENST00000492512 NDUFC2-KCTD14E9PQ53 114 aa8.06□□□□□ -1.12
GPNMB-213ENST00000492512 SNRPEP62304 92 aaKnown RBP8.06□□□□□ -1.12
GPNMB-213ENST00000492512 C9orf129Q5T035 196 aaKnown RBP8.06□□□□□ -1.12
GPNMB-213ENST00000492512 CDIP1Q9H305 208 aa8.06□□□□□ -1.12
GPNMB-213ENST00000492512 TRBV30A0A0K0K1B3 111 aa8.05□□□□□ -1.12
GPNMB-213ENST00000492512 SMIM27A0A1W2PRY6 76 aa8.05□□□□□ -1.12
GPNMB-213ENST00000492512 IFITM10A6NMD0 228 aa8.05□□□□□ -1.12
GPNMB-213ENST00000492512 NUPR1O60356 82 aa8.05□□□□□ -1.12
GPNMB-213ENST00000492512 HIST1H2BKO60814 126 aa8.05□□□□□ -1.12
GPNMB-213ENST00000492512 HIST1H2BJP06899 126 aa8.05□□□□□ -1.12
GPNMB-213ENST00000492512 CRYGAP11844 174 aa8.05□□□□□ -1.12
GPNMB-213ENST00000492512 HIST1H2BOP23527 126 aa8.05□□□□□ -1.12
GPNMB-213ENST00000492512 HIST1H2BBP33778 126 aa8.05□□□□□ -1.12
GPNMB-213ENST00000492512 HIST1H2BDP58876 126 aa8.05□□□□□ -1.12
GPNMB-213ENST00000492512 HIST1H2BCP62807 126 aa8.05□□□□□ -1.12
GPNMB-213ENST00000492512 RPL39P62891 51 aaKnown RBP8.05□□□□□ -1.12
GPNMB-213ENST00000492512 HIST2H2BEQ16778 126 aa8.05□□□□□ -1.12
GPNMB-213ENST00000492512 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.05□□□□□ -1.12
GPNMB-213ENST00000492512 HIST1H2BHQ93079 126 aa8.05□□□□□ -1.12
GPNMB-213ENST00000492512 HIST1H2BNQ99877 126 aa8.05□□□□□ -1.12
GPNMB-213ENST00000492512 HIST1H2BMQ99879 126 aa8.05□□□□□ -1.12
GPNMB-213ENST00000492512 S100A8P05109 93 aa8.04□□□□□ -1.12
GPNMB-213ENST00000492512 HBBP68871 147 aa8.04□□□□□ -1.12
GPNMB-213ENST00000492512 FABP9Q0Z7S8 132 aa8.04□□□□□ -1.12
GPNMB-213ENST00000492512 KIAA0087Q14695 138 aa8.04□□□□□ -1.12
GPNMB-213ENST00000492512 PACRGQ96M98 296 aaPredicted RBP8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms