RNA–Protein interactions for RNA: ENST00000491402.5

VCPKMT-204, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,793 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-204ENST00000491402 COX6A2Q02221 97 aa14.55□□□□□ -0.08
VCPKMT-204ENST00000491402 NFE4Q86UQ8 179 aa14.55□□□□□ -0.08
VCPKMT-204ENST00000491402 CHAC1Q9BUX1 264 aa14.55□□□□□ -0.08
VCPKMT-204ENST00000491402 C11orf86A6NJI1 115 aa14.55□□□□□ -0.08
VCPKMT-204ENST00000491402 HERVK_113P63121 156 aa14.55□□□□□ -0.08
VCPKMT-204ENST00000491402 C1orf43Q9BWL3 253 aa14.55□□□□□ -0.08
VCPKMT-204ENST00000491402 GEMIN7Q9H840 131 aaKnown RBP14.55□□□□□ -0.08
VCPKMT-204ENST00000491402 IGKV2D-24A0A075B6R9 120 aa14.54□□□□□ -0.08
VCPKMT-204ENST00000491402 DPM2O94777 84 aa14.54□□□□□ -0.08
VCPKMT-204ENST00000491402 PLNP26678 52 aa14.54□□□□□ -0.08
VCPKMT-204ENST00000491402 Q6ZR54 194 aa14.54□□□□□ -0.08
VCPKMT-204ENST00000491402 CD164L2Q6UWJ8 174 aa14.53□□□□□ -0.08
VCPKMT-204ENST00000491402 SCGB1D1O95968 90 aa14.52□□□□□ -0.08
VCPKMT-204ENST00000491402 IGKCP01834 107 aa14.52□□□□□ -0.08
VCPKMT-204ENST00000491402 DNAH6Q9C0G6 4158 aa14.52□□□□□ -0.08
VCPKMT-204ENST00000491402 IGHV3OR16-9A0A0B4J2B5 98 aa14.52□□□□□ -0.09
VCPKMT-204ENST00000491402 JOSD1Q15040 202 aaPredicted RBP14.52□□□□□ -0.09
VCPKMT-204ENST00000491402 KRTAP26-1Q6PEX3 210 aa14.52□□□□□ -0.09
VCPKMT-204ENST00000491402 RMI2Q96E14 147 aa14.51□□□□□ -0.09
VCPKMT-204ENST00000491402 CDKN2A-AS1Q9UH64 79 aa14.51□□□□□ -0.09
VCPKMT-204ENST00000491402 IGLV5-45A0A087WSX0 123 aa14.5□□□□□ -0.09
VCPKMT-204ENST00000491402 GAGE12HA6NDE8 117 aa14.5□□□□□ -0.09
VCPKMT-204ENST00000491402 FOXI1Q12951 378 aa14.5□□□□□ -0.09
VCPKMT-204ENST00000491402 LINC00469Q8N7U9 141 aa14.5□□□□□ -0.09
VCPKMT-204ENST00000491402 ZNF22P17026 224 aaPredicted RBP14.5□□□□□ -0.09
VCPKMT-204ENST00000491402 PYY3Q5JQD4 70 aa14.5□□□□□ -0.09
VCPKMT-204ENST00000491402 TMEM170BQ5T4T1 132 aa14.49□□□□□ -0.09
VCPKMT-204ENST00000491402 ATOH7Q8N100 152 aa14.49□□□□□ -0.09
VCPKMT-204ENST00000491402 C5orf38Q86SI9 138 aa14.47□□□□□ -0.09
VCPKMT-204ENST00000491402 COX11Q9Y6N1 276 aa14.47□□□□□ -0.09
VCPKMT-204ENST00000491402 DNAH10Q8IVF4 4471 aa14.46□□□□□ -0.09
VCPKMT-204ENST00000491402 A0A087WZ39 114 aa14.46□□□□□ -0.09
VCPKMT-204ENST00000491402 COX7A2LO14548 114 aa14.45□□□□□ -0.1
VCPKMT-204ENST00000491402 TM2D2Q9BX73 214 aa14.45□□□□□ -0.1
VCPKMT-204ENST00000491402 C6orf223Q8N319 242 aa14.45□□□□□ -0.1
VCPKMT-204ENST00000491402 H3BRM9 83 aa14.44□□□□□ -0.1
VCPKMT-204ENST00000491402 MAPKAPK5-AS1Q8N8E1 139 aa14.44□□□□□ -0.1
VCPKMT-204ENST00000491402 Q6ZRN7 208 aaPredicted RBP14.43□□□□□ -0.1
VCPKMT-204ENST00000491402 SPINK8P0C7L1 97 aa14.42□□□□□ -0.1
VCPKMT-204ENST00000491402 DNAH2Q9P225 4427 aa14.42□□□□□ -0.1
VCPKMT-204ENST00000491402 TMEM223A0PJW6 202 aa14.42□□□□□ -0.1
VCPKMT-204ENST00000491402 PSCAO43653 123 aa14.42□□□□□ -0.1
VCPKMT-204ENST00000491402 MALP21145 153 aa14.42□□□□□ -0.1
VCPKMT-204ENST00000491402 STPG4Q8N801 248 aa14.42□□□□□ -0.1
VCPKMT-204ENST00000491402 SMIM1B2RUZ4 78 aa14.41□□□□□ -0.1
VCPKMT-204ENST00000491402 C1orf134Q5TEV5 83 aa14.41□□□□□ -0.1
VCPKMT-204ENST00000491402 LINC01561Q8N1V8 128 aa14.4□□□□□ -0.1
VCPKMT-204ENST00000491402 hDV102S1A0JD36 115 aa14.39□□□□□ -0.11
VCPKMT-204ENST00000491402 MAJINQ3KP22 176 aa14.39□□□□□ -0.11
VCPKMT-204ENST00000491402 CDPF1Q6NVV7 123 aa14.39□□□□□ -0.11
VCPKMT-204ENST00000491402 IGHV3-64A0A075B6Q5 118 aa14.39□□□□□ -0.11
VCPKMT-204ENST00000491402 HERVK_113P61574 105 aa14.38□□□□□ -0.11
VCPKMT-204ENST00000491402 IGLV5-39A0A0G2JS06 123 aa14.37□□□□□ -0.11
VCPKMT-204ENST00000491402 APOMO95445 188 aa14.37□□□□□ -0.11
VCPKMT-204ENST00000491402 IGHV1-58A0A0C4DH39 117 aa14.36□□□□□ -0.11
VCPKMT-204ENST00000491402 HSBP1L1C9JCN9 74 aa14.36□□□□□ -0.11
VCPKMT-204ENST00000491402 SMIM6P0DI80 62 aa14.36□□□□□ -0.11
VCPKMT-204ENST00000491402 C15orf56Q8N910 161 aa14.36□□□□□ -0.11
VCPKMT-204ENST00000491402 RTL8CO15255 209 aa14.35□□□□□ -0.11
VCPKMT-204ENST00000491402 ORAOV1Q8WV07 137 aa14.35□□□□□ -0.11
VCPKMT-204ENST00000491402 E9PLD3 99 aa14.34□□□□□ -0.11
VCPKMT-204ENST00000491402 ANKRD39Q53RE8 183 aa14.34□□□□□ -0.11
VCPKMT-204ENST00000491402 USP17L23D6RBM5 183 aa14.34□□□□□ -0.11
VCPKMT-204ENST00000491402 LECT2O14960 151 aa14.34□□□□□ -0.11
VCPKMT-204ENST00000491402 VAMP8Q9BV40 100 aa14.34□□□□□ -0.11
VCPKMT-204ENST00000491402 CFAP161Q6P656 301 aa14.33□□□□□ -0.12
VCPKMT-204ENST00000491402 WFDC2Q14508 124 aa14.32□□□□□ -0.12
VCPKMT-204ENST00000491402 TOMM7Q9P0U1 55 aa14.32□□□□□ -0.12
VCPKMT-204ENST00000491402 FRAS1Q86XX4 4008 aa14.32□□□□□ -0.12
VCPKMT-204ENST00000491402 IGKV2D-26A0A0A0MRZ7 120 aa14.32□□□□□ -0.12
VCPKMT-204ENST00000491402 PAM16Q9Y3D7 125 aa14.32□□□□□ -0.12
VCPKMT-204ENST00000491402 LRCOL1A6NCL2 159 aa14.31□□□□□ -0.12
VCPKMT-204ENST00000491402 HIGD2BQ4VC39 106 aa14.31□□□□□ -0.12
VCPKMT-204ENST00000491402 GVQW2A0A096LPI5 108 aaPredicted RBP14.3□□□□□ -0.12
VCPKMT-204ENST00000491402 LEPROTO15243 131 aa14.3□□□□□ -0.12
VCPKMT-204ENST00000491402 SPAG11BQ08648 103 aa14.3□□□□□ -0.12
VCPKMT-204ENST00000491402 Q8IZM0 81 aa14.3□□□□□ -0.12
VCPKMT-204ENST00000491402 COX7B2Q8TF08 81 aa14.3□□□□□ -0.12
VCPKMT-204ENST00000491402 TSPEAR-AS2P59090 65 aa14.29□□□□□ -0.12
VCPKMT-204ENST00000491402 J3QQQ9 107 aa14.29□□□□□ -0.12
VCPKMT-204ENST00000491402 PRSS2P07478 247 aa14.29□□□□□ -0.12
VCPKMT-204ENST00000491402 KIAA0087Q14695 138 aa14.29□□□□□ -0.12
VCPKMT-204ENST00000491402 PLEKHB2Q96CS7 222 aa14.29□□□□□ -0.12
VCPKMT-204ENST00000491402 LINC00526Q96FQ7 95 aa14.29□□□□□ -0.12
VCPKMT-204ENST00000491402 NMUP48645 174 aa14.28□□□□□ -0.12
VCPKMT-204ENST00000491402 SPATA45Q537H7 98 aa14.28□□□□□ -0.12
VCPKMT-204ENST00000491402 DNAH17Q9UFH2 4485 aa14.27□□□□□ -0.12
VCPKMT-204ENST00000491402 ZNF561-AS1K7EIQ3 104 aa14.27□□□□□ -0.12
VCPKMT-204ENST00000491402 S100A12P80511 92 aa14.27□□□□□ -0.12
VCPKMT-204ENST00000491402 C6orf226Q5I0X4 101 aa14.27□□□□□ -0.13
VCPKMT-204ENST00000491402 LGALS3P17931 250 aaKnown RBP14.26□□□□□ -0.13
VCPKMT-204ENST00000491402 A0A087WTM6 91 aa14.24□□□□□ -0.13
VCPKMT-204ENST00000491402 TNP2Q05952 138 aa14.24□□□□□ -0.13
VCPKMT-204ENST00000491402 C14orf177Q52M58 125 aa14.24□□□□□ -0.13
VCPKMT-204ENST00000491402 C12orf57Q99622 126 aa14.24□□□□□ -0.13
VCPKMT-204ENST00000491402 TTTY13Q9BZ97 58 aa14.24□□□□□ -0.13
VCPKMT-204ENST00000491402 C2orf82Q6UX34 121 aa14.24□□□□□ -0.13
VCPKMT-204ENST00000491402 LINC00336Q6ZUF6 198 aa14.24□□□□□ -0.13
VCPKMT-204ENST00000491402 NTN5Q8WTR8 489 aaPredicted RBP14.24□□□□□ -0.13
VCPKMT-204ENST00000491402 CKS1BP61024 79 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms