RNA–Protein interactions for RNA: ENST00000490999.5

SCAMP3-208, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 1,011 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-208ENST00000490999 RPL13AP40429 203 aaKnown RBP9.12□□□□□ -0.95
SCAMP3-208ENST00000490999 C1orf196B1AJZ1 125 aa9.11□□□□□ -0.95
SCAMP3-208ENST00000490999 POLR2KP53803 58 aaKnown RBP9.11□□□□□ -0.95
SCAMP3-208ENST00000490999 TRBV27A0A0K0K1C4 114 aa9.1□□□□□ -0.95
SCAMP3-208ENST00000490999 S100A8P05109 93 aa9.1□□□□□ -0.95
SCAMP3-208ENST00000490999 UBE2BP63146 152 aa9.1□□□□□ -0.95
SCAMP3-208ENST00000490999 C10orf25Q5T742 122 aa9.1□□□□□ -0.95
SCAMP3-208ENST00000490999 FAM104BQ5XKR9 115 aa9.1□□□□□ -0.95
SCAMP3-208ENST00000490999 Q6ZUT4 128 aa9.1□□□□□ -0.95
SCAMP3-208ENST00000490999 KRTAP7-1Q8IUC3 87 aa9.1□□□□□ -0.95
SCAMP3-208ENST00000490999 AMN1Q8IY45 258 aa9.1□□□□□ -0.95
SCAMP3-208ENST00000490999 LINC00862A6NCI5 91 aa9.09□□□□□ -0.95
SCAMP3-208ENST00000490999 M0QXV9 152 aa9.09□□□□□ -0.95
SCAMP3-208ENST00000490999 PPP1R2P9O14990 202 aa9.09□□□□□ -0.95
SCAMP3-208ENST00000490999 GAGE2EQ4V326 116 aa9.09□□□□□ -0.95
SCAMP3-208ENST00000490999 GAGE2DQ9UEU5 116 aa9.09□□□□□ -0.95
SCAMP3-208ENST00000490999 VCYO14598 125 aa9.08□□□□□ -0.96
SCAMP3-208ENST00000490999 ORAOV1Q8WV07 137 aa9.08□□□□□ -0.96
SCAMP3-208ENST00000490999 UBE2D4Q9Y2X8 147 aa9.08□□□□□ -0.96
SCAMP3-208ENST00000490999 FSIP2Q5CZC0 6907 aa9.08□□□□□ -0.96
SCAMP3-208ENST00000490999 F8W036 122 aa9.07□□□□□ -0.96
SCAMP3-208ENST00000490999 SMAGPQ0VAQ4 97 aa9.07□□□□□ -0.96
SCAMP3-208ENST00000490999 PNRC1Q12796 327 aaPredicted RBP9.07□□□□□ -0.96
SCAMP3-208ENST00000490999 RNF151Q2KHN1 245 aa9.07□□□□□ -0.96
SCAMP3-208ENST00000490999 MRPL35Q9NZE8 188 aaKnown RBP9.07□□□□□ -0.96
SCAMP3-208ENST00000490999 SMKR1H3BMG3 65 aa9.06□□□□□ -0.96
SCAMP3-208ENST00000490999 TCAPO15273 167 aa9.06□□□□□ -0.96
SCAMP3-208ENST00000490999 SUMO2P61956 95 aaKnown RBP9.06□□□□□ -0.96
SCAMP3-208ENST00000490999 MRPL51Q4U2R6 128 aaKnown RBP9.06□□□□□ -0.96
SCAMP3-208ENST00000490999 NRACQ8N912 160 aa9.06□□□□□ -0.96
SCAMP3-208ENST00000490999 OR10D4PQ8NGN7 298 aa9.06□□□□□ -0.96
SCAMP3-208ENST00000490999 C20orf78Q9BR46 151 aa9.06□□□□□ -0.96
SCAMP3-208ENST00000490999 C6orf48Q9UBA6 75 aa9.06□□□□□ -0.96
SCAMP3-208ENST00000490999 TRBV24-1A0A075B6N3 115 aa9.05□□□□□ -0.96
SCAMP3-208ENST00000490999 NDUFA1O15239 70 aa9.05□□□□□ -0.96
SCAMP3-208ENST00000490999 FCER1GP30273 86 aa9.05□□□□□ -0.96
SCAMP3-208ENST00000490999 RPL32P62910 135 aaKnown RBP9.05□□□□□ -0.96
SCAMP3-208ENST00000490999 HBBP68871 147 aa9.05□□□□□ -0.96
SCAMP3-208ENST00000490999 CLLU1Q5K131 121 aa9.05□□□□□ -0.96
SCAMP3-208ENST00000490999 UNQ6190/PRO20217Q6UXQ8 127 aa9.05□□□□□ -0.96
SCAMP3-208ENST00000490999 ATP5L2Q7Z4Y8 100 aa9.05□□□□□ -0.96
SCAMP3-208ENST00000490999 IMMP2LQ96T52 175 aa9.05□□□□□ -0.96
SCAMP3-208ENST00000490999 KIR2DL4Q99706 377 aa9.05□□□□□ -0.96
SCAMP3-208ENST00000490999 A0A1B0GXF2 115 aa9.04□□□□□ -0.96
SCAMP3-208ENST00000490999 CKS2P33552 79 aa9.04□□□□□ -0.96
SCAMP3-208ENST00000490999 ANAPC16Q96DE5 110 aa9.04□□□□□ -0.96
SCAMP3-208ENST00000490999 RETNLBQ9BQ08 111 aa9.04□□□□□ -0.96
SCAMP3-208ENST00000490999 A0A087X002 238 aa9.03□□□□□ -0.96
SCAMP3-208ENST00000490999 PPBPP02775 128 aa9.03□□□□□ -0.96
SCAMP3-208ENST00000490999 MT-ND4LP03901 98 aa9.03□□□□□ -0.96
SCAMP3-208ENST00000490999 MRPL54Q6P161 138 aaKnown RBP9.03□□□□□ -0.96
SCAMP3-208ENST00000490999 TMEM18Q96B42 140 aa9.03□□□□□ -0.96
SCAMP3-208ENST00000490999 CARHSP1Q9Y2V2 147 aaKnown RBP9.03□□□□□ -0.96
SCAMP3-208ENST00000490999 CSDC2Q9Y534 153 aaKnown RBP9.03□□□□□ -0.96
SCAMP3-208ENST00000490999 TLX1NBP0CAT3 122 aa9.02□□□□□ -0.97
SCAMP3-208ENST00000490999 ZNF861PO60384 105 aa9□□□□□ -0.97
SCAMP3-208ENST00000490999 TNFRSF6BO95407 300 aa9□□□□□ -0.97
SCAMP3-208ENST00000490999 C9orf129Q5T035 196 aaKnown RBP9□□□□□ -0.97
SCAMP3-208ENST00000490999 UQCC3Q6UW78 93 aa9□□□□□ -0.97
SCAMP3-208ENST00000490999 TIMM21Q9BVV7 248 aa9□□□□□ -0.97
SCAMP3-208ENST00000490999 D6R8Y8 96 aa8.99□□□□□ -0.97
SCAMP3-208ENST00000490999 IGHV3OR16-9A0A0B4J2B5 98 aa8.98□□□□□ -0.97
SCAMP3-208ENST00000490999 RPL39P62891 51 aaKnown RBP8.98□□□□□ -0.97
SCAMP3-208ENST00000490999 ORMDL3Q8N138 153 aa8.98□□□□□ -0.97
SCAMP3-208ENST00000490999 SMIM2Q9BVW6 85 aa8.98□□□□□ -0.97
SCAMP3-208ENST00000490999 C2orf82Q6UX34 121 aa8.97□□□□□ -0.97
SCAMP3-208ENST00000490999 TMEM136Q6ZRR5 245 aa8.97□□□□□ -0.97
SCAMP3-208ENST00000490999 FAM104AQ969W3 186 aa8.97□□□□□ -0.97
SCAMP3-208ENST00000490999 CDIP1Q9H305 208 aa8.97□□□□□ -0.97
SCAMP3-208ENST00000490999 LAMTOR2Q9Y2Q5 125 aa8.97□□□□□ -0.97
SCAMP3-208ENST00000490999 F8WDY8 70 aa8.96□□□□□ -0.98
SCAMP3-208ENST00000490999 IFITM2Q01629 132 aa8.96□□□□□ -0.98
SCAMP3-208ENST00000490999 TYMSOSQ8TAI1 123 aa8.96□□□□□ -0.98
SCAMP3-208ENST00000490999 PRELID3AQ96N28 172 aa8.96□□□□□ -0.98
SCAMP3-208ENST00000490999 ANAPC11Q9NYG5 84 aa8.96□□□□□ -0.98
SCAMP3-208ENST00000490999 TMEM218A2RU14 115 aa8.95□□□□□ -0.98
SCAMP3-208ENST00000490999 IFITM10A6NMD0 228 aa8.95□□□□□ -0.98
SCAMP3-208ENST00000490999 PRSS47A8MTI9 375 aa8.95□□□□□ -0.98
SCAMP3-208ENST00000490999 NPYP01303 97 aa8.95□□□□□ -0.98
SCAMP3-208ENST00000490999 CTDSP1Q9GZU7 261 aa8.95□□□□□ -0.98
SCAMP3-208ENST00000490999 NDUFC2-KCTD14E9PQ53 114 aa8.94□□□□□ -0.98
SCAMP3-208ENST00000490999 RAB5AP20339 215 aa8.94□□□□□ -0.98
SCAMP3-208ENST00000490999 KIAA0087Q14695 138 aa8.94□□□□□ -0.98
SCAMP3-208ENST00000490999 SPANXA1Q9NS26 97 aa8.94□□□□□ -0.98
SCAMP3-208ENST00000490999 LINC00469Q8N7U9 141 aa8.93□□□□□ -0.98
SCAMP3-208ENST00000490999 SEC11CQ9BY50 192 aa8.93□□□□□ -0.98
SCAMP3-208ENST00000490999 TRAV9-1A0A075B6T8 112 aa8.92□□□□□ -0.98
SCAMP3-208ENST00000490999 CRYGAP11844 174 aa8.92□□□□□ -0.98
SCAMP3-208ENST00000490999 MRPS36P82909 103 aaKnown RBP8.92□□□□□ -0.98
SCAMP3-208ENST00000490999 TGIF2-C20orf24A0A0A6YYL0 155 aa8.91□□□□□ -0.98
SCAMP3-208ENST00000490999 TRBV30A0A0K0K1B3 111 aa8.91□□□□□ -0.98
SCAMP3-208ENST00000490999 KRTAP13-2Q52LG2 175 aa8.91□□□□□ -0.98
SCAMP3-208ENST00000490999 MAP1LC3AQ9H492 121 aa8.91□□□□□ -0.98
SCAMP3-208ENST00000490999 C22orf24Q9Y442 160 aa8.91□□□□□ -0.98
SCAMP3-208ENST00000490999 K7EMI3 77 aa8.9□□□□□ -0.98
SCAMP3-208ENST00000490999 NUPR1O60356 82 aa8.9□□□□□ -0.98
SCAMP3-208ENST00000490999 ADCYAP1P18509 176 aa8.9□□□□□ -0.98
SCAMP3-208ENST00000490999 TPRXLQ17RH7 258 aa8.9□□□□□ -0.98
SCAMP3-208ENST00000490999 LINC00242Q5T6M2 205 aa8.9□□□□□ -0.98
SCAMP3-208ENST00000490999 PACRGQ96M98 296 aaPredicted RBP8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms