RNA–Protein interactions for RNA: ENST00000490990.1

RGPD6-211, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

TSL 4

Gene RGPD6, Length 541 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-211ENST00000490990 PKIGQ9Y2B9 76 aa13.22□□□□□ -0.29
RGPD6-211ENST00000490990 IGHV3OR16-9A0A0B4J2B5 98 aa13.21□□□□□ -0.29
RGPD6-211ENST00000490990 IFITM10A6NMD0 228 aa13.21□□□□□ -0.29
RGPD6-211ENST00000490990 KRTAP29-1A8MX34 341 aaPredicted RBP13.21□□□□□ -0.29
RGPD6-211ENST00000490990 IGLV4-3A0A075B6K6 122 aa13.2□□□□□ -0.3
RGPD6-211ENST00000490990 APOMO95445 188 aa13.2□□□□□ -0.3
RGPD6-211ENST00000490990 HNRNPA3P51991 378 aaKnown RBP13.19□□□□□ -0.3
RGPD6-211ENST00000490990 C10orf91Q5T1B1 145 aa13.19□□□□□ -0.3
RGPD6-211ENST00000490990 Q6ZRU5 148 aa13.19□□□□□ -0.3
RGPD6-211ENST00000490990 C2orf48Q96LS8 159 aa13.19□□□□□ -0.3
RGPD6-211ENST00000490990 LRP1Q07954 4544 aaKnown RBP13.19□□□□□ -0.3
RGPD6-211ENST00000490990 J3QL48 77 aa13.18□□□□□ -0.3
RGPD6-211ENST00000490990 K7EMI3 77 aa13.18□□□□□ -0.3
RGPD6-211ENST00000490990 ORMDL2Q53FV1 153 aa13.18□□□□□ -0.3
RGPD6-211ENST00000490990 C2orf66Q6UXQ4 117 aa13.18□□□□□ -0.3
RGPD6-211ENST00000490990 STPG4Q8N801 248 aa13.18□□□□□ -0.3
RGPD6-211ENST00000490990 TMEM141Q96I45 108 aa13.18□□□□□ -0.3
RGPD6-211ENST00000490990 CAMK2N2Q96S95 79 aa13.18□□□□□ -0.3
RGPD6-211ENST00000490990 NXT2Q9NPJ8 142 aaKnown RBP13.18□□□□□ -0.3
RGPD6-211ENST00000490990 LINC00474Q9P2X8 69 aa13.18□□□□□ -0.3
RGPD6-211ENST00000490990 CYSLTR1Q9Y271 337 aa13.18□□□□□ -0.3
RGPD6-211ENST00000490990 FAT3Q8TDW7 4589 aa13.17□□□□□ -0.3
RGPD6-211ENST00000490990 SPAG11BQ08648 103 aa13.17□□□□□ -0.3
RGPD6-211ENST00000490990 KIAA1644Q3SXP7 199 aa13.17□□□□□ -0.3
RGPD6-211ENST00000490990 OR10D4PQ8NGN7 298 aa13.17□□□□□ -0.3
RGPD6-211ENST00000490990 S100PP25815 95 aa13.16□□□□□ -0.3
RGPD6-211ENST00000490990 CARHSP1Q9Y2V2 147 aaKnown RBP13.16□□□□□ -0.3
RGPD6-211ENST00000490990 LINC00242Q5T6M2 205 aa13.15□□□□□ -0.3
RGPD6-211ENST00000490990 TGIF2-C20orf24A0A0A6YYL0 155 aa13.14□□□□□ -0.31
RGPD6-211ENST00000490990 LOC107984640A0A0U1RRK4 108 aa13.14□□□□□ -0.31
RGPD6-211ENST00000490990 PTTG1IPP53801 180 aa13.14□□□□□ -0.31
RGPD6-211ENST00000490990 TEX43Q6ZNM6 134 aa13.14□□□□□ -0.31
RGPD6-211ENST00000490990 ORAOV1Q8WV07 137 aa13.14□□□□□ -0.31
RGPD6-211ENST00000490990 GNB1LQ9BYB4 327 aa13.14□□□□□ -0.31
RGPD6-211ENST00000490990 LINC00173Q6ZV60 143 aa13.13□□□□□ -0.31
RGPD6-211ENST00000490990 C7orf33Q8WU49 177 aa13.13□□□□□ -0.31
RGPD6-211ENST00000490990 AMELXQ99217 191 aa13.13□□□□□ -0.31
RGPD6-211ENST00000490990 A0A087WZ39 114 aa13.12□□□□□ -0.31
RGPD6-211ENST00000490990 IGIPA6NJ69 53 aa13.12□□□□□ -0.31
RGPD6-211ENST00000490990 OXTP01178 125 aa13.12□□□□□ -0.31
RGPD6-211ENST00000490990 NPSP0C0P6 89 aa13.12□□□□□ -0.31
RGPD6-211ENST00000490990 UBE2D1P51668 147 aa13.12□□□□□ -0.31
RGPD6-211ENST00000490990 RHEBQ15382 184 aa13.12□□□□□ -0.31
RGPD6-211ENST00000490990 F8WDY8 70 aa13.11□□□□□ -0.31
RGPD6-211ENST00000490990 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.11□□□□□ -0.31
RGPD6-211ENST00000490990 RNF151Q2KHN1 245 aa13.11□□□□□ -0.31
RGPD6-211ENST00000490990 ZC2HC1BQ5TFG8 222 aa13.11□□□□□ -0.31
RGPD6-211ENST00000490990 Q6ZN92 141 aa13.11□□□□□ -0.31
RGPD6-211ENST00000490990 C2orf88Q9BSF0 95 aa13.11□□□□□ -0.31
RGPD6-211ENST00000490990 GAGE2BQ13066 116 aa13.1□□□□□ -0.31
RGPD6-211ENST00000490990 COX19Q49B96 90 aa13.1□□□□□ -0.31
RGPD6-211ENST00000490990 RPS10P5Q9NQ39 176 aa13.1□□□□□ -0.31
RGPD6-211ENST00000490990 MRPL35Q9NZE8 188 aaKnown RBP13.1□□□□□ -0.31
RGPD6-211ENST00000490990 G0S2P27469 103 aa13.09□□□□□ -0.31
RGPD6-211ENST00000490990 ALKBH7Q9BT30 221 aaPredicted RBP13.09□□□□□ -0.31
RGPD6-211ENST00000490990 VCX2Q9H322 139 aa13.09□□□□□ -0.31
RGPD6-211ENST00000490990 A0A0J9YXV3 536 aa13.08□□□□□ -0.32
RGPD6-211ENST00000490990 TOMM6Q96B49 74 aa13.08□□□□□ -0.32
RGPD6-211ENST00000490990 NDUFA1O15239 70 aa13.07□□□□□ -0.32
RGPD6-211ENST00000490990 MT-ND6P03923 174 aa13.07□□□□□ -0.32
RGPD6-211ENST00000490990 KIAA0087Q14695 138 aa13.07□□□□□ -0.32
RGPD6-211ENST00000490990 FAM19A3Q7Z5A8 133 aa13.07□□□□□ -0.32
RGPD6-211ENST00000490990 TIMM17AQ99595 171 aa13.07□□□□□ -0.32
RGPD6-211ENST00000490990 LINC01546A6NGU7 62 aa13.06□□□□□ -0.32
RGPD6-211ENST00000490990 PRR3P79522 188 aaKnown RBP13.06□□□□□ -0.32
RGPD6-211ENST00000490990 RPL18AQ02543 176 aaKnown RBP13.06□□□□□ -0.32
RGPD6-211ENST00000490990 C10orf25Q5T742 122 aa13.06□□□□□ -0.32
RGPD6-211ENST00000490990 LINC01561Q8N1V8 128 aa13.06□□□□□ -0.32
RGPD6-211ENST00000490990 PAPPA-AS1Q5QFB9 102 aa13.05□□□□□ -0.32
RGPD6-211ENST00000490990 UNQ6190/PRO20217Q6UXQ8 127 aa13.05□□□□□ -0.32
RGPD6-211ENST00000490990 MRPL18Q9H0U6 180 aaKnown RBP13.05□□□□□ -0.32
RGPD6-211ENST00000490990 A0A1W2PNN7 141 aa13.04□□□□□ -0.32
RGPD6-211ENST00000490990 C6orf48Q9UBA6 75 aa13.04□□□□□ -0.32
RGPD6-211ENST00000490990 FABP9Q0Z7S8 132 aa13.03□□□□□ -0.32
RGPD6-211ENST00000490990 ERASQ7Z444 233 aa13.03□□□□□ -0.32
RGPD6-211ENST00000490990 TLX1NBP0CAT3 122 aa13.02□□□□□ -0.33
RGPD6-211ENST00000490990 C9orf116Q5BN46 136 aaPredicted RBP13.02□□□□□ -0.33
RGPD6-211ENST00000490990 APOC3P02656 99 aa13.01□□□□□ -0.33
RGPD6-211ENST00000490990 SCGB3A1Q96QR1 104 aa13.01□□□□□ -0.33
RGPD6-211ENST00000490990 LINC01549A6NIU2 74 aa13□□□□□ -0.33
RGPD6-211ENST00000490990 HERVK_113P63121 156 aa13□□□□□ -0.33
RGPD6-211ENST00000490990 SEC11AP67812 179 aa13□□□□□ -0.33
RGPD6-211ENST00000490990 Q6ZRP5 223 aa13□□□□□ -0.33
RGPD6-211ENST00000490990 C2orf82Q6UX34 121 aa12.99□□□□□ -0.33
RGPD6-211ENST00000490990 TRBV30A0A0K0K1B3 111 aa12.98□□□□□ -0.33
RGPD6-211ENST00000490990 FA2HQ7L5A8 372 aa12.98□□□□□ -0.33
RGPD6-211ENST00000490990 SVBPQ8N300 66 aa12.98□□□□□ -0.33
RGPD6-211ENST00000490990 SNAPINO95295 136 aa12.97□□□□□ -0.33
RGPD6-211ENST00000490990 NDUFA5Q16718 116 aa12.97□□□□□ -0.33
RGPD6-211ENST00000490990 CDKN2A-AS1Q9UH64 79 aa12.97□□□□□ -0.33
RGPD6-211ENST00000490990 GEMIN7Q9H840 131 aaKnown RBP12.96□□□□□ -0.33
RGPD6-211ENST00000490990 SMCO4Q9NRQ5 59 aa12.96□□□□□ -0.33
RGPD6-211ENST00000490990 TRAPPC1Q9Y5R8 145 aa12.96□□□□□ -0.33
RGPD6-211ENST00000490990 PRSS2P07478 247 aa12.95□□□□□ -0.34
RGPD6-211ENST00000490990 Q8IZM0 81 aa12.95□□□□□ -0.34
RGPD6-211ENST00000490990 PACRGQ96M98 296 aaPredicted RBP12.95□□□□□ -0.34
RGPD6-211ENST00000490990 TOMM7Q9P0U1 55 aa12.95□□□□□ -0.34
RGPD6-211ENST00000490990 MT1HL1P0DM35 61 aa12.94□□□□□ -0.34
RGPD6-211ENST00000490990 GAGE2EQ4V326 116 aa12.94□□□□□ -0.34
RGPD6-211ENST00000490990 GAGE2DQ9UEU5 116 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms