RNA–Protein interactions for RNA: ENST00000490831.1

COL27A1-206, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 3

Gene COL27A1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-206ENST00000490831 KRTAP29-1A8MX34 341 aaPredicted RBP9.62□□□□□ -0.87
COL27A1-206ENST00000490831 C5orf38Q86SI9 138 aa9.62□□□□□ -0.87
COL27A1-206ENST00000490831 C2orf48Q96LS8 159 aa9.62□□□□□ -0.87
COL27A1-206ENST00000490831 A0A096LNI7 61 aa9.61□□□□□ -0.87
COL27A1-206ENST00000490831 IFITM10A6NMD0 228 aa9.61□□□□□ -0.87
COL27A1-206ENST00000490831 APOMO95445 188 aa9.61□□□□□ -0.87
COL27A1-206ENST00000490831 ORMDL2Q53FV1 153 aa9.61□□□□□ -0.87
COL27A1-206ENST00000490831 DPH3Q96FX2 82 aa9.61□□□□□ -0.87
COL27A1-206ENST00000490831 NXT2Q9NPJ8 142 aaKnown RBP9.61□□□□□ -0.87
COL27A1-206ENST00000490831 LINC00474Q9P2X8 69 aa9.61□□□□□ -0.87
COL27A1-206ENST00000490831 CARHSP1Q9Y2V2 147 aaKnown RBP9.61□□□□□ -0.87
COL27A1-206ENST00000490831 LRP1Q07954 4544 aaKnown RBP9.6□□□□□ -0.87
COL27A1-206ENST00000490831 NPSP0C0P6 89 aa9.6□□□□□ -0.87
COL27A1-206ENST00000490831 MAJINQ3KP22 176 aa9.6□□□□□ -0.87
COL27A1-206ENST00000490831 C2orf66Q6UXQ4 117 aa9.6□□□□□ -0.87
COL27A1-206ENST00000490831 OR10D4PQ8NGN7 298 aa9.6□□□□□ -0.87
COL27A1-206ENST00000490831 TMEM141Q96I45 108 aa9.6□□□□□ -0.87
COL27A1-206ENST00000490831 CYSLTR1Q9Y271 337 aa9.6□□□□□ -0.87
COL27A1-206ENST00000490831 IGKV2-24A0A0C4DH68 120 aa9.59□□□□□ -0.87
COL27A1-206ENST00000490831 Q6ZRU5 148 aa9.59□□□□□ -0.87
COL27A1-206ENST00000490831 GNB1LQ9BYB4 327 aa9.59□□□□□ -0.87
COL27A1-206ENST00000490831 FAT3Q8TDW7 4589 aa9.59□□□□□ -0.87
COL27A1-206ENST00000490831 F8WDY8 70 aa9.58□□□□□ -0.88
COL27A1-206ENST00000490831 S100PP25815 95 aa9.58□□□□□ -0.88
COL27A1-206ENST00000490831 RHEBQ15382 184 aa9.58□□□□□ -0.88
COL27A1-206ENST00000490831 LINC00242Q5T6M2 205 aa9.58□□□□□ -0.88
COL27A1-206ENST00000490831 CAMK2N2Q96S95 79 aa9.58□□□□□ -0.88
COL27A1-206ENST00000490831 IGIPA6NJ69 53 aa9.57□□□□□ -0.88
COL27A1-206ENST00000490831 HNRNPA3P51991 378 aaKnown RBP9.57□□□□□ -0.88
COL27A1-206ENST00000490831 SPAG11BQ08648 103 aa9.57□□□□□ -0.88
COL27A1-206ENST00000490831 RNF151Q2KHN1 245 aa9.57□□□□□ -0.88
COL27A1-206ENST00000490831 KIAA1644Q3SXP7 199 aa9.57□□□□□ -0.88
COL27A1-206ENST00000490831 COX19Q49B96 90 aa9.57□□□□□ -0.88
COL27A1-206ENST00000490831 TEX43Q6ZNM6 134 aa9.57□□□□□ -0.88
COL27A1-206ENST00000490831 LINC00173Q6ZV60 143 aa9.57□□□□□ -0.88
COL27A1-206ENST00000490831 STPG4Q8N801 248 aa9.57□□□□□ -0.88
COL27A1-206ENST00000490831 AMELXQ99217 191 aa9.57□□□□□ -0.88
COL27A1-206ENST00000490831 A0A087WZ39 114 aa9.56□□□□□ -0.88
COL27A1-206ENST00000490831 LOC107984640A0A0U1RRK4 108 aa9.56□□□□□ -0.88
COL27A1-206ENST00000490831 OXTP01178 125 aa9.56□□□□□ -0.88
COL27A1-206ENST00000490831 UBE2D1P51668 147 aa9.56□□□□□ -0.88
COL27A1-206ENST00000490831 PTTG1IPP53801 180 aa9.56□□□□□ -0.88
COL27A1-206ENST00000490831 TGIF2-C20orf24A0A0A6YYL0 155 aa9.55□□□□□ -0.88
COL27A1-206ENST00000490831 LINC01546A6NGU7 62 aa9.55□□□□□ -0.88
COL27A1-206ENST00000490831 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.55□□□□□ -0.88
COL27A1-206ENST00000490831 J3QL48 77 aa9.55□□□□□ -0.88
COL27A1-206ENST00000490831 G0S2P27469 103 aa9.55□□□□□ -0.88
COL27A1-206ENST00000490831 FAM19A3Q7Z5A8 133 aa9.55□□□□□ -0.88
COL27A1-206ENST00000490831 C7orf33Q8WU49 177 aa9.55□□□□□ -0.88
COL27A1-206ENST00000490831 ORAOV1Q8WV07 137 aa9.55□□□□□ -0.88
COL27A1-206ENST00000490831 MT-ND6P03923 174 aa9.54□□□□□ -0.88
COL27A1-206ENST00000490831 Q6ZN92 141 aa9.54□□□□□ -0.88
COL27A1-206ENST00000490831 LINC01561Q8N1V8 128 aa9.54□□□□□ -0.88
COL27A1-206ENST00000490831 TOMM6Q96B49 74 aa9.54□□□□□ -0.88
COL27A1-206ENST00000490831 TIMM17AQ99595 171 aa9.54□□□□□ -0.88
COL27A1-206ENST00000490831 C2orf88Q9BSF0 95 aa9.54□□□□□ -0.88
COL27A1-206ENST00000490831 ALKBH7Q9BT30 221 aaPredicted RBP9.54□□□□□ -0.88
COL27A1-206ENST00000490831 MRPL35Q9NZE8 188 aaKnown RBP9.54□□□□□ -0.88
COL27A1-206ENST00000490831 KIAA0087Q14695 138 aa9.53□□□□□ -0.88
COL27A1-206ENST00000490831 VCX2Q9H322 139 aa9.53□□□□□ -0.88
COL27A1-206ENST00000490831 RPS10P5Q9NQ39 176 aa9.53□□□□□ -0.88
COL27A1-206ENST00000490831 PAPPA-AS1Q5QFB9 102 aa9.52□□□□□ -0.89
COL27A1-206ENST00000490831 ZC2HC1BQ5TFG8 222 aa9.52□□□□□ -0.89
COL27A1-206ENST00000490831 NDUFA1O15239 70 aa9.51□□□□□ -0.89
COL27A1-206ENST00000490831 GAGE2BQ13066 116 aa9.51□□□□□ -0.89
COL27A1-206ENST00000490831 LINC01549A6NIU2 74 aa9.5□□□□□ -0.89
COL27A1-206ENST00000490831 TLX1NBP0CAT3 122 aa9.5□□□□□ -0.89
COL27A1-206ENST00000490831 C10orf25Q5T742 122 aa9.5□□□□□ -0.89
COL27A1-206ENST00000490831 ERASQ7Z444 233 aa9.5□□□□□ -0.89
COL27A1-206ENST00000490831 MRPL18Q9H0U6 180 aaKnown RBP9.5□□□□□ -0.89
COL27A1-206ENST00000490831 A0A0J9YXV3 536 aa9.49□□□□□ -0.89
COL27A1-206ENST00000490831 PRR3P79522 188 aaKnown RBP9.49□□□□□ -0.89
COL27A1-206ENST00000490831 FABP9Q0Z7S8 132 aa9.49□□□□□ -0.89
COL27A1-206ENST00000490831 UNQ6190/PRO20217Q6UXQ8 127 aa9.49□□□□□ -0.89
COL27A1-206ENST00000490831 C6orf48Q9UBA6 75 aa9.49□□□□□ -0.89
COL27A1-206ENST00000490831 A0A1W2PNN7 141 aa9.48□□□□□ -0.89
COL27A1-206ENST00000490831 SEC11AP67812 179 aa9.48□□□□□ -0.89
COL27A1-206ENST00000490831 APOC3P02656 99 aa9.47□□□□□ -0.89
COL27A1-206ENST00000490831 HERVK_113P63121 156 aa9.47□□□□□ -0.89
COL27A1-206ENST00000490831 RPL18AQ02543 176 aaKnown RBP9.47□□□□□ -0.89
COL27A1-206ENST00000490831 SVBPQ8N300 66 aa9.47□□□□□ -0.89
COL27A1-206ENST00000490831 SCGB3A1Q96QR1 104 aa9.47□□□□□ -0.89
COL27A1-206ENST00000490831 TRBV30A0A0K0K1B3 111 aa9.46□□□□□ -0.9
COL27A1-206ENST00000490831 SNAPINO95295 136 aa9.46□□□□□ -0.9
COL27A1-206ENST00000490831 NDUFA5Q16718 116 aa9.46□□□□□ -0.9
COL27A1-206ENST00000490831 C9orf116Q5BN46 136 aaPredicted RBP9.46□□□□□ -0.9
COL27A1-206ENST00000490831 Q6ZRP5 223 aa9.46□□□□□ -0.9
COL27A1-206ENST00000490831 FA2HQ7L5A8 372 aa9.45□□□□□ -0.9
COL27A1-206ENST00000490831 C2orf82Q6UX34 121 aa9.44□□□□□ -0.9
COL27A1-206ENST00000490831 Q8IZM0 81 aa9.44□□□□□ -0.9
COL27A1-206ENST00000490831 CDKN2A-AS1Q9UH64 79 aa9.44□□□□□ -0.9
COL27A1-206ENST00000490831 TRAPPC1Q9Y5R8 145 aa9.44□□□□□ -0.9
COL27A1-206ENST00000490831 GEMIN7Q9H840 131 aaKnown RBP9.43□□□□□ -0.9
COL27A1-206ENST00000490831 SMCO4Q9NRQ5 59 aa9.43□□□□□ -0.9
COL27A1-206ENST00000490831 IGLV5-45A0A087WSX0 123 aa9.42□□□□□ -0.9
COL27A1-206ENST00000490831 TINCRA0A1B0GVN0 87 aa9.42□□□□□ -0.9
COL27A1-206ENST00000490831 NDUFC2-KCTD14E9PQ53 114 aa9.42□□□□□ -0.9
COL27A1-206ENST00000490831 MT1HL1P0DM35 61 aa9.42□□□□□ -0.9
COL27A1-206ENST00000490831 C18orf32Q8TCD1 76 aa9.42□□□□□ -0.9
COL27A1-206ENST00000490831 URB1-AS1Q96HZ7 61 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 162.3 ms