RNA–Protein interactions for RNA: ENST00000490677.1

HOXB3-211, Transcript of homeobox B3, humanhuman

TSL 1 (best) BASIC

Gene HOXB3, Length 1,109 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-211ENST00000490677 GAGE2BQ13066 116 aa17.24■□□□□ 0.35
HOXB3-211ENST00000490677 LINC01600Q96MT4 127 aa17.24■□□□□ 0.35
HOXB3-211ENST00000490677 SRSF9Q13242 221 aaKnown RBP eCLIP17.23■□□□□ 0.35
HOXB3-211ENST00000490677 SPAG11BQ08648 103 aa17.22■□□□□ 0.35
HOXB3-211ENST00000490677 ORMDL3Q8N138 153 aa17.22■□□□□ 0.35
HOXB3-211ENST00000490677 OR10D4PQ8NGN7 298 aa17.21■□□□□ 0.35
HOXB3-211ENST00000490677 RNF151Q2KHN1 245 aa17.2■□□□□ 0.34
HOXB3-211ENST00000490677 TMEM136Q6ZRR5 245 aa17.2■□□□□ 0.34
HOXB3-211ENST00000490677 PRELID3AQ96N28 172 aa17.2■□□□□ 0.34
HOXB3-211ENST00000490677 A0A0J9YXV3 536 aa17.19■□□□□ 0.34
HOXB3-211ENST00000490677 PRSS47A8MTI9 375 aa17.19■□□□□ 0.34
HOXB3-211ENST00000490677 SPINK6Q6UWN8 80 aa17.18■□□□□ 0.34
HOXB3-211ENST00000490677 Q6ZRP5 223 aa17.18■□□□□ 0.34
HOXB3-211ENST00000490677 ORAOV1Q8WV07 137 aa17.17■□□□□ 0.34
HOXB3-211ENST00000490677 PYGO1Q9Y3Y4 419 aa17.17■□□□□ 0.34
HOXB3-211ENST00000490677 IFITM10A6NMD0 228 aa17.16■□□□□ 0.34
HOXB3-211ENST00000490677 C9orf116Q5BN46 136 aaPredicted RBP17.16■□□□□ 0.34
HOXB3-211ENST00000490677 C10orf25Q5T742 122 aa17.16■□□□□ 0.34
HOXB3-211ENST00000490677 MRPL35Q9NZE8 188 aaKnown RBP17.16■□□□□ 0.34
HOXB3-211ENST00000490677 IGLV4-3A0A075B6K6 122 aa17.15■□□□□ 0.34
HOXB3-211ENST00000490677 PNRC1Q12796 327 aaPredicted RBP17.15■□□□□ 0.34
HOXB3-211ENST00000490677 ODF1Q14990 250 aa17.14■□□□□ 0.33
HOXB3-211ENST00000490677 F8WDY8 70 aa17.13■□□□□ 0.33
HOXB3-211ENST00000490677 KRTAP10-8P60410 259 aa17.13■□□□□ 0.33
HOXB3-211ENST00000490677 RPL18AQ02543 176 aaKnown RBP17.13■□□□□ 0.33
HOXB3-211ENST00000490677 RAB5AP20339 215 aa17.12■□□□□ 0.33
HOXB3-211ENST00000490677 IFI27P40305 119 aaPredicted RBP17.12■□□□□ 0.33
HOXB3-211ENST00000490677 KIAA0087Q14695 138 aa17.12■□□□□ 0.33
HOXB3-211ENST00000490677 LINC00242Q5T6M2 205 aa17.12■□□□□ 0.33
HOXB3-211ENST00000490677 ANAPC16Q96DE5 110 aa17.12■□□□□ 0.33
HOXB3-211ENST00000490677 LAMTOR2Q9Y2Q5 125 aa17.12■□□□□ 0.33
HOXB3-211ENST00000490677 LRP2P98164 4655 aa17.12■□□□□ 0.33
HOXB3-211ENST00000490677 A0A087WZ39 114 aa17.1■□□□□ 0.33
HOXB3-211ENST00000490677 UNQ6190/PRO20217Q6UXQ8 127 aa17.1■□□□□ 0.33
HOXB3-211ENST00000490677 C6orf48Q9UBA6 75 aa17.1■□□□□ 0.33
HOXB3-211ENST00000490677 PSORS1C2Q9UIG4 136 aa17.1■□□□□ 0.33
HOXB3-211ENST00000490677 LOC389332A0A1B0GUA5 103 aa17.09■□□□□ 0.33
HOXB3-211ENST00000490677 NDUFA1O15239 70 aa17.09■□□□□ 0.33
HOXB3-211ENST00000490677 TLX1NBP0CAT3 122 aa17.09■□□□□ 0.33
HOXB3-211ENST00000490677 MT-ND4LP03901 98 aa17.08■□□□□ 0.32
HOXB3-211ENST00000490677 LINC00173Q6ZV60 143 aa17.08■□□□□ 0.32
HOXB3-211ENST00000490677 PHF5AQ7RTV0 110 aaKnown RBP17.08■□□□□ 0.32
HOXB3-211ENST00000490677 Q8N8P6 123 aa17.08■□□□□ 0.32
HOXB3-211ENST00000490677 TMEM141Q96I45 108 aa17.08■□□□□ 0.32
HOXB3-211ENST00000490677 MAP1LC3AQ9H492 121 aa17.08■□□□□ 0.32
HOXB3-211ENST00000490677 TGIF2-C20orf24A0A0A6YYL0 155 aa17.06■□□□□ 0.32
HOXB3-211ENST00000490677 UBE2D1P51668 147 aa17.06■□□□□ 0.32
HOXB3-211ENST00000490677 ZC2HC1BQ5TFG8 222 aa17.06■□□□□ 0.32
HOXB3-211ENST00000490677 REG3GQ6UW15 175 aa17.06■□□□□ 0.32
HOXB3-211ENST00000490677 FAM168BA1KXE4 195 aa17.05■□□□□ 0.32
HOXB3-211ENST00000490677 IMMP2LQ96T52 175 aa17.05■□□□□ 0.32
HOXB3-211ENST00000490677 C2orf66Q6UXQ4 117 aa17.04■□□□□ 0.32
HOXB3-211ENST00000490677 KRTAP11-1Q8IUC1 163 aa17.04■□□□□ 0.32
HOXB3-211ENST00000490677 KRTAP7-1Q8IUC3 87 aa17.04■□□□□ 0.32
HOXB3-211ENST00000490677 AMELXQ99217 191 aa17.04■□□□□ 0.32
HOXB3-211ENST00000490677 RAB14P61106 215 aa17.02■□□□□ 0.32
HOXB3-211ENST00000490677 TEX43Q6ZNM6 134 aa17.02■□□□□ 0.32
HOXB3-211ENST00000490677 CYSLTR1Q9Y271 337 aa17.02■□□□□ 0.32
HOXB3-211ENST00000490677 IGIPA6NJ69 53 aa17.01■□□□□ 0.31
HOXB3-211ENST00000490677 CLLU1Q5K131 121 aa17.01■□□□□ 0.31
HOXB3-211ENST00000490677 ADCYAP1P18509 176 aa17■□□□□ 0.31
HOXB3-211ENST00000490677 LINC01561Q8N1V8 128 aa17■□□□□ 0.31
HOXB3-211ENST00000490677 MT-ND6P03923 174 aa16.99■□□□□ 0.31
HOXB3-211ENST00000490677 C2orf82Q6UX34 121 aa16.99■□□□□ 0.31
HOXB3-211ENST00000490677 FAM19A3Q7Z5A8 133 aa16.98■□□□□ 0.31
HOXB3-211ENST00000490677 K7EMI3 77 aa16.97■□□□□ 0.31
HOXB3-211ENST00000490677 NPSP0C0P6 89 aa16.97■□□□□ 0.31
HOXB3-211ENST00000490677 ORMDL2Q53FV1 153 aa16.97■□□□□ 0.31
HOXB3-211ENST00000490677 C1orf137Q5JT78 98 aa16.97■□□□□ 0.31
HOXB3-211ENST00000490677 TRBV30A0A0K0K1B3 111 aa16.96■□□□□ 0.31
HOXB3-211ENST00000490677 GAGE2EQ4V326 116 aa16.95■□□□□ 0.3
HOXB3-211ENST00000490677 C2orf88Q9BSF0 95 aa16.95■□□□□ 0.3
HOXB3-211ENST00000490677 GAGE2DQ9UEU5 116 aa16.95■□□□□ 0.3
HOXB3-211ENST00000490677 FAM19A5Q7Z5A7 132 aaPredicted RBP16.94■□□□□ 0.3
HOXB3-211ENST00000490677 CTDSP1Q9GZU7 261 aa16.94■□□□□ 0.3
HOXB3-211ENST00000490677 VCX2Q9H322 139 aa16.94■□□□□ 0.3
HOXB3-211ENST00000490677 NXT2Q9NPJ8 142 aaKnown RBP16.94■□□□□ 0.3
HOXB3-211ENST00000490677 Q6ZN92 141 aa16.93■□□□□ 0.3
HOXB3-211ENST00000490677 NDUFC2-KCTD14E9PQ53 114 aa16.92■□□□□ 0.3
HOXB3-211ENST00000490677 IGLV7-43P04211 117 aa16.92■□□□□ 0.3
HOXB3-211ENST00000490677 C9orf129Q5T035 196 aaKnown RBP16.92■□□□□ 0.3
HOXB3-211ENST00000490677 IFITM2Q01629 132 aa16.91■□□□□ 0.3
HOXB3-211ENST00000490677 KIAA1644Q3SXP7 199 aa16.9■□□□□ 0.3
HOXB3-211ENST00000490677 TMEM218A2RU14 115 aa16.89■□□□□ 0.29
HOXB3-211ENST00000490677 RNF213Q63HN8 5207 aa16.88■□□□□ 0.29
HOXB3-211ENST00000490677 UQCC3Q6UW78 93 aa16.88■□□□□ 0.29
HOXB3-211ENST00000490677 TOMM6Q96B49 74 aa16.88■□□□□ 0.29
HOXB3-211ENST00000490677 TIMM17AQ99595 171 aa16.88■□□□□ 0.29
HOXB3-211ENST00000490677 CDKN2A-AS1Q9UH64 79 aa16.87■□□□□ 0.29
HOXB3-211ENST00000490677 TRAV9-1A0A075B6T8 112 aa16.86■□□□□ 0.29
HOXB3-211ENST00000490677 Q8IZM0 81 aa16.86■□□□□ 0.29
HOXB3-211ENST00000490677 PACRGQ96M98 296 aaPredicted RBP16.86■□□□□ 0.29
HOXB3-211ENST00000490677 M0QXV9 152 aa16.85■□□□□ 0.29
HOXB3-211ENST00000490677 HERVK_113P63121 156 aa16.83■□□□□ 0.28
HOXB3-211ENST00000490677 DIRC1Q969H9 104 aa16.83■□□□□ 0.28
HOXB3-211ENST00000490677 TOMM7Q9P0U1 55 aa16.83■□□□□ 0.28
HOXB3-211ENST00000490677 LINC01546A6NGU7 62 aa16.82■□□□□ 0.28
HOXB3-211ENST00000490677 H0Y9J4 135 aa16.82■□□□□ 0.28
HOXB3-211ENST00000490677 PAPPA-AS1Q5QFB9 102 aa16.81■□□□□ 0.28
HOXB3-211ENST00000490677 ERASQ7Z444 233 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 112.8 ms