RNA–Protein interactions for RNA: ENST00000490348.1

SRGAP3-208, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 1,554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-208ENST00000490348 C14orf177Q52M58 125 aa9.36□□□□□ -0.91
SRGAP3-208ENST00000490348 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.36□□□□□ -0.91
SRGAP3-208ENST00000490348 FA2HQ7L5A8 372 aa9.36□□□□□ -0.91
SRGAP3-208ENST00000490348 HIST1H2BHQ93079 126 aa9.36□□□□□ -0.91
SRGAP3-208ENST00000490348 HIST1H2BNQ99877 126 aa9.36□□□□□ -0.91
SRGAP3-208ENST00000490348 HIST1H2BMQ99879 126 aa9.36□□□□□ -0.91
SRGAP3-208ENST00000490348 IFITM10A6NMD0 228 aa9.35□□□□□ -0.91
SRGAP3-208ENST00000490348 SLPIP03973 132 aa9.35□□□□□ -0.91
SRGAP3-208ENST00000490348 AMELXQ99217 191 aa9.35□□□□□ -0.91
SRGAP3-208ENST00000490348 LINC00614P0C842 121 aa9.34□□□□□ -0.91
SRGAP3-208ENST00000490348 NDUFA6P56556 154 aa9.34□□□□□ -0.91
SRGAP3-208ENST00000490348 TIMM17AQ99595 171 aa9.34□□□□□ -0.91
SRGAP3-208ENST00000490348 AP5S1Q9NUS5 200 aa9.34□□□□□ -0.91
SRGAP3-208ENST00000490348 hDV102S1A0JD36 115 aa9.33□□□□□ -0.92
SRGAP3-208ENST00000490348 NPSP0C0P6 89 aa9.33□□□□□ -0.92
SRGAP3-208ENST00000490348 FAT1Q14517 4588 aa9.33□□□□□ -0.92
SRGAP3-208ENST00000490348 G0S2P27469 103 aa9.33□□□□□ -0.92
SRGAP3-208ENST00000490348 PMCHL1Q16048 86 aa9.33□□□□□ -0.92
SRGAP3-208ENST00000490348 HIGD2BQ4VC39 106 aa9.33□□□□□ -0.92
SRGAP3-208ENST00000490348 LINC00242Q5T6M2 205 aa9.33□□□□□ -0.92
SRGAP3-208ENST00000490348 TEX43Q6ZNM6 134 aa9.33□□□□□ -0.92
SRGAP3-208ENST00000490348 ERASQ7Z444 233 aa9.33□□□□□ -0.92
SRGAP3-208ENST00000490348 GVQW2A0A096LPI5 108 aaPredicted RBP9.32□□□□□ -0.92
SRGAP3-208ENST00000490348 IGHV3OR16-9A0A0B4J2B5 98 aa9.32□□□□□ -0.92
SRGAP3-208ENST00000490348 CDK2AP2O75956 126 aa9.32□□□□□ -0.92
SRGAP3-208ENST00000490348 UBE2D1P51668 147 aa9.32□□□□□ -0.92
SRGAP3-208ENST00000490348 COX6A2Q02221 97 aa9.32□□□□□ -0.92
SRGAP3-208ENST00000490348 COA6Q5JTJ3 125 aaKnown RBP9.32□□□□□ -0.92
SRGAP3-208ENST00000490348 HIST3H2BBQ8N257 126 aa9.32□□□□□ -0.92
SRGAP3-208ENST00000490348 SCGB3A1Q96QR1 104 aa9.32□□□□□ -0.92
SRGAP3-208ENST00000490348 KRTAP17-1Q9BYP8 105 aa9.32□□□□□ -0.92
SRGAP3-208ENST00000490348 FAM30AQ9NZY2 134 aa9.32□□□□□ -0.92
SRGAP3-208ENST00000490348 COX7A2LO14548 114 aa9.31□□□□□ -0.92
SRGAP3-208ENST00000490348 CNBPP62633 177 aaKnown RBP9.31□□□□□ -0.92
SRGAP3-208ENST00000490348 CFAP161Q6P656 301 aa9.31□□□□□ -0.92
SRGAP3-208ENST00000490348 Q6ZN92 141 aa9.31□□□□□ -0.92
SRGAP3-208ENST00000490348 C5orf38Q86SI9 138 aa9.31□□□□□ -0.92
SRGAP3-208ENST00000490348 VCX2Q9H322 139 aa9.31□□□□□ -0.92
SRGAP3-208ENST00000490348 LINC00526Q96FQ7 95 aa9.3□□□□□ -0.92
SRGAP3-208ENST00000490348 IGHV1-58A0A0C4DH39 117 aa9.29□□□□□ -0.92
SRGAP3-208ENST00000490348 XGP55808 180 aa9.29□□□□□ -0.92
SRGAP3-208ENST00000490348 C2orf88Q9BSF0 95 aa9.29□□□□□ -0.92
SRGAP3-208ENST00000490348 LINC00310P59036 64 aa9.29□□□□□ -0.92
SRGAP3-208ENST00000490348 Q6ZSA8 131 aa9.29□□□□□ -0.92
SRGAP3-208ENST00000490348 C9orf163Q8N9P6 203 aa9.29□□□□□ -0.92
SRGAP3-208ENST00000490348 LINC01549A6NIU2 74 aa9.28□□□□□ -0.92
SRGAP3-208ENST00000490348 HBDP02042 147 aa9.28□□□□□ -0.92
SRGAP3-208ENST00000490348 MALP21145 153 aa9.28□□□□□ -0.92
SRGAP3-208ENST00000490348 HAMPP81172 84 aa9.28□□□□□ -0.92
SRGAP3-208ENST00000490348 PDZD11Q5EBL8 140 aa9.28□□□□□ -0.92
SRGAP3-208ENST00000490348 FAM19A3Q7Z5A8 133 aa9.28□□□□□ -0.92
SRGAP3-208ENST00000490348 ABCA13Q86UQ4 5058 aa9.27□□□□□ -0.93
SRGAP3-208ENST00000490348 PYY3Q5JQD4 70 aa9.27□□□□□ -0.93
SRGAP3-208ENST00000490348 PAPPA-AS1Q5QFB9 102 aa9.27□□□□□ -0.93
SRGAP3-208ENST00000490348 OR10D4PQ8NGN7 298 aa9.27□□□□□ -0.93
SRGAP3-208ENST00000490348 CHCHD1Q96BP2 118 aaKnown RBP9.27□□□□□ -0.93
SRGAP3-208ENST00000490348 A0A087WZ39 114 aa9.26□□□□□ -0.93
SRGAP3-208ENST00000490348 CST9LQ9H4G1 147 aa9.26□□□□□ -0.93
SRGAP3-208ENST00000490348 LINC00587B1AMM8 73 aa9.25□□□□□ -0.93
SRGAP3-208ENST00000490348 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.25□□□□□ -0.93
SRGAP3-208ENST00000490348 SDIM1Q6ZPB5 146 aa9.25□□□□□ -0.93
SRGAP3-208ENST00000490348 BAGE3Q86Y29 109 aa9.25□□□□□ -0.93
SRGAP3-208ENST00000490348 PACRGQ96M98 296 aaPredicted RBP9.25□□□□□ -0.93
SRGAP3-208ENST00000490348 PCLOQ9Y6V0 5065 aa9.25□□□□□ -0.93
SRGAP3-208ENST00000490348 IGLV4-69A0A075B6H9 119 aa9.24□□□□□ -0.93
SRGAP3-208ENST00000490348 IGHV3-64A0A075B6Q5 118 aa9.24□□□□□ -0.93
SRGAP3-208ENST00000490348 A0A0J9YXV3 536 aa9.24□□□□□ -0.93
SRGAP3-208ENST00000490348 HIST1H2BLQ99880 126 aa9.24□□□□□ -0.93
SRGAP3-208ENST00000490348 VPS13BQ7Z7G8 4022 aa9.24□□□□□ -0.93
SRGAP3-208ENST00000490348 PANO1I0J062 215 aa9.24□□□□□ -0.93
SRGAP3-208ENST00000490348 NUPR1O60356 82 aa9.24□□□□□ -0.93
SRGAP3-208ENST00000490348 SERF1AO75920 110 aa9.24□□□□□ -0.93
SRGAP3-208ENST00000490348 FABP4P15090 132 aa9.24□□□□□ -0.93
SRGAP3-208ENST00000490348 PMVKQ15126 192 aa9.24□□□□□ -0.93
SRGAP3-208ENST00000490348 FAM19A2Q8N3H0 131 aa9.24□□□□□ -0.93
SRGAP3-208ENST00000490348 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.23□□□□□ -0.93
SRGAP3-208ENST00000490348 ZNF561-AS1K7EIQ3 104 aa9.23□□□□□ -0.93
SRGAP3-208ENST00000490348 ORAOV1Q8WV07 137 aa9.23□□□□□ -0.93
SRGAP3-208ENST00000490348 CDKN2A-AS1Q9UH64 79 aa9.23□□□□□ -0.93
SRGAP3-208ENST00000490348 SRRM2Q9UQ35 2752 aaKnown RBP9.22□□□□□ -0.93
SRGAP3-208ENST00000490348 APOMO95445 188 aa9.22□□□□□ -0.93
SRGAP3-208ENST00000490348 SPAG11BQ08648 103 aa9.22□□□□□ -0.93
SRGAP3-208ENST00000490348 JOSD1Q15040 202 aaPredicted RBP9.22□□□□□ -0.93
SRGAP3-208ENST00000490348 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.22□□□□□ -0.93
SRGAP3-208ENST00000490348 TINCRA0A1B0GVN0 87 aa9.21□□□□□ -0.93
SRGAP3-208ENST00000490348 HSBP1O75506 76 aa9.21□□□□□ -0.93
SRGAP3-208ENST00000490348 HERVK_113P63121 156 aa9.21□□□□□ -0.93
SRGAP3-208ENST00000490348 KIAA0087Q14695 138 aa9.21□□□□□ -0.93
SRGAP3-208ENST00000490348 Q6ZRU5 148 aa9.21□□□□□ -0.93
SRGAP3-208ENST00000490348 IGLV5-45A0A087WSX0 123 aa9.2□□□□□ -0.94
SRGAP3-208ENST00000490348 TSTD3H0UI37 97 aa9.2□□□□□ -0.94
SRGAP3-208ENST00000490348 ATP5LO75964 103 aa9.2□□□□□ -0.94
SRGAP3-208ENST00000490348 SEC11AP67812 179 aa9.2□□□□□ -0.94
SRGAP3-208ENST00000490348 SYCNQ0VAF6 134 aa9.2□□□□□ -0.94
SRGAP3-208ENST00000490348 LINC01561Q8N1V8 128 aa9.2□□□□□ -0.94
SRGAP3-208ENST00000490348 CARD19Q96LW7 228 aa9.2□□□□□ -0.94
SRGAP3-208ENST00000490348 SCXQ7RTU7 201 aa9.2□□□□□ -0.94
SRGAP3-208ENST00000490348 C2orf48Q96LS8 159 aa9.2□□□□□ -0.94
SRGAP3-208ENST00000490348 CHAC1Q9BUX1 264 aa9.2□□□□□ -0.94
SRGAP3-208ENST00000490348 GEMIN7Q9H840 131 aaKnown RBP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms