RNA–Protein interactions for RNA: ENST00000490111.1

RTN1-207, Transcript of reticulon 1, humanhuman

TSL 3

Gene RTN1, Length 303 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-207ENST00000490111 HIST1H2BJP06899 126 aa2.84□□□□□ -1.95
RTN1-207ENST00000490111 KRTAP10-1P60331 282 aa2.84□□□□□ -1.95
RTN1-207ENST00000490111 PSMG4Q5JS54 123 aa2.84□□□□□ -1.95
RTN1-207ENST00000490111 LELP1Q5T871 98 aa2.84□□□□□ -1.95
RTN1-207ENST00000490111 IZUMO2Q6UXV1 221 aa2.84□□□□□ -1.95
RTN1-207ENST00000490111 ZFP2Q6ZN57 461 aa2.84□□□□□ -1.95
RTN1-207ENST00000490111 BPIFA4PQ86YQ2 179 aa2.84□□□□□ -1.95
RTN1-207ENST00000490111 LSM10Q969L4 123 aaKnown RBP2.84□□□□□ -1.95
RTN1-207ENST00000490111 CIB3Q96Q77 187 aaPredicted RBP2.84□□□□□ -1.95
RTN1-207ENST00000490111 MIEN1Q9BRT3 115 aa2.84□□□□□ -1.95
RTN1-207ENST00000490111 NPCDR1Q9BY65 106 aa2.84□□□□□ -1.95
RTN1-207ENST00000490111 TTTY13Q9BZ97 58 aa2.84□□□□□ -1.95
RTN1-207ENST00000490111 OSTCQ9NRP0 149 aa2.84□□□□□ -1.95
RTN1-207ENST00000490111 COMMD3Q9UBI1 195 aa2.84□□□□□ -1.95
RTN1-207ENST00000490111 SCP2D1Q9UJQ7 156 aa2.84□□□□□ -1.95
RTN1-207ENST00000490111 EPDR1Q9UM22 224 aa2.84□□□□□ -1.95
RTN1-207ENST00000490111 TPRKBQ9Y3C4 175 aa2.84□□□□□ -1.95
RTN1-207ENST00000490111 NACAE9PAV3 2078 aa2.84□□□□□ -1.95
RTN1-207ENST00000490111 FAT1Q14517 4588 aa2.83□□□□□ -1.96
RTN1-207ENST00000490111 H3BMM0 161 aa2.83□□□□□ -1.96
RTN1-207ENST00000490111 IGKV2-30P06310 120 aa2.83□□□□□ -1.96
RTN1-207ENST00000490111 MIFP14174 115 aa2.83□□□□□ -1.96
RTN1-207ENST00000490111 ETV6P41212 452 aa2.83□□□□□ -1.96
RTN1-207ENST00000490111 LSM3P62310 102 aaKnown RBP2.83□□□□□ -1.96
RTN1-207ENST00000490111 HAMPP81172 84 aa2.83□□□□□ -1.96
RTN1-207ENST00000490111 CATR1Q13166 79 aa2.83□□□□□ -1.96
RTN1-207ENST00000490111 MIR17HGQ75NE6 70 aa2.83□□□□□ -1.96
RTN1-207ENST00000490111 HIST3H2BBQ8N257 126 aa2.83□□□□□ -1.96
RTN1-207ENST00000490111 MIR7-3HGQ8N6C7 128 aa2.83□□□□□ -1.96
RTN1-207ENST00000490111 OR10P1Q8NGE3 313 aa2.83□□□□□ -1.96
RTN1-207ENST00000490111 UBE2WQ96B02 151 aa2.83□□□□□ -1.96
RTN1-207ENST00000490111 PRELID3AQ96N28 172 aa2.83□□□□□ -1.96
RTN1-207ENST00000490111 HIST1H2BLQ99880 126 aa2.83□□□□□ -1.96
RTN1-207ENST00000490111 SLC35B3Q9H1N7 401 aa2.83□□□□□ -1.96
RTN1-207ENST00000490111 RPRMQ9NS64 109 aa2.83□□□□□ -1.96
RTN1-207ENST00000490111 TMEM14BQ9NUH8 114 aa2.83□□□□□ -1.96
RTN1-207ENST00000490111 TRBV24-1A0A075B6N3 115 aa2.82□□□□□ -1.96
RTN1-207ENST00000490111 C19orf71A6NCJ1 209 aa2.82□□□□□ -1.96
RTN1-207ENST00000490111 IGKV1-17P01599 117 aa2.82□□□□□ -1.96
RTN1-207ENST00000490111 ZNF705BP0CI00 300 aaPredicted RBP2.82□□□□□ -1.96
RTN1-207ENST00000490111 PYYP10082 97 aa2.82□□□□□ -1.96
RTN1-207ENST00000490111 RNASE2P10153 161 aaKnown RBP2.82□□□□□ -1.96
RTN1-207ENST00000490111 S100A10P60903 97 aa2.82□□□□□ -1.96
RTN1-207ENST00000490111 TMEM258P61165 79 aa2.82□□□□□ -1.96
RTN1-207ENST00000490111 PRCDQ00LT1 54 aa2.82□□□□□ -1.96
RTN1-207ENST00000490111 HIGD2BQ4VC39 106 aa2.82□□□□□ -1.96
RTN1-207ENST00000490111 ZC2HC1BQ5TFG8 222 aa2.82□□□□□ -1.96
RTN1-207ENST00000490111 C7orf65Q6ZTY9 151 aa2.82□□□□□ -1.96
RTN1-207ENST00000490111 C5orf17Q8NAS9 161 aa2.82□□□□□ -1.96
RTN1-207ENST00000490111 TYMSOSQ8TAI1 123 aa2.82□□□□□ -1.96
RTN1-207ENST00000490111 DIRC1Q969H9 104 aa2.82□□□□□ -1.96
RTN1-207ENST00000490111 SPANXDQ9BXN6 97 aa2.82□□□□□ -1.96
RTN1-207ENST00000490111 KRTAP1-5Q9BYS1 174 aa2.82□□□□□ -1.96
RTN1-207ENST00000490111 FAM168BA1KXE4 195 aa2.81□□□□□ -1.96
RTN1-207ENST00000490111 AKR1C1Q04828 323 aa2.81□□□□□ -1.96
RTN1-207ENST00000490111 EIF5AL1Q6IS14 154 aaKnown RBP2.81□□□□□ -1.96
RTN1-207ENST00000490111 PATE2Q6UY27 113 aa2.81□□□□□ -1.96
RTN1-207ENST00000490111 ZNF705AQ6ZN79 300 aaPredicted RBP2.81□□□□□ -1.96
RTN1-207ENST00000490111 FOXI2Q6ZQN5 318 aa2.81□□□□□ -1.96
RTN1-207ENST00000490111 OR4B1Q8NGF8 309 aa2.81□□□□□ -1.96
RTN1-207ENST00000490111 SMCR5Q8TEV8 140 aa2.81□□□□□ -1.96
RTN1-207ENST00000490111 RBPMSQ93062 196 aaKnown RBP2.81□□□□□ -1.96
RTN1-207ENST00000490111 LINC00052Q96N35 136 aa2.81□□□□□ -1.96
RTN1-207ENST00000490111 LRP2P98164 4655 aa2.8□□□□□ -1.96
RTN1-207ENST00000490111 TRAV12-2A0A075B6T6 113 aa2.8□□□□□ -1.96
RTN1-207ENST00000490111 A8MUU9 505 aa2.8□□□□□ -1.96
RTN1-207ENST00000490111 ZNF705FA8MVS1 300 aaPredicted RBP2.8□□□□□ -1.96
RTN1-207ENST00000490111 NPYP01303 97 aa2.8□□□□□ -1.96
RTN1-207ENST00000490111 HBDP02042 147 aa2.8□□□□□ -1.96
RTN1-207ENST00000490111 IL4P05112 153 aa2.8□□□□□ -1.96
RTN1-207ENST00000490111 TRGC1P0CF51 173 aa2.8□□□□□ -1.96
RTN1-207ENST00000490111 IGLC1P0CG04 106 aa2.8□□□□□ -1.96
RTN1-207ENST00000490111 SPART-AS1P0CW21 52 aa2.8□□□□□ -1.96
RTN1-207ENST00000490111 DEFB130BP0DP73 79 aa2.8□□□□□ -1.96
RTN1-207ENST00000490111 DEFB130AP0DP74 79 aa2.8□□□□□ -1.96
RTN1-207ENST00000490111 GZMBP10144 247 aa2.8□□□□□ -1.96
RTN1-207ENST00000490111 SNCAP37840 140 aa2.8□□□□□ -1.96
RTN1-207ENST00000490111 SNRPD3P62318 126 aaKnown RBP2.8□□□□□ -1.96
RTN1-207ENST00000490111 ERHP84090 104 aaKnown RBP2.8□□□□□ -1.96
RTN1-207ENST00000490111 MIAQ16674 131 aa2.8□□□□□ -1.96
RTN1-207ENST00000490111 Q8N3U1 123 aa2.8□□□□□ -1.96
RTN1-207ENST00000490111 SPANXA2-OT1Q8N9U9 137 aa2.8□□□□□ -1.96
RTN1-207ENST00000490111 SCGB3A1Q96QR1 104 aa2.8□□□□□ -1.96
RTN1-207ENST00000490111 AGPAT4-IT1Q9H0P7 198 aa2.8□□□□□ -1.96
RTN1-207ENST00000490111 TRBV20-1A0A075B6N2 111 aa2.79□□□□□ -1.96
RTN1-207ENST00000490111 IGKV1OR2-108A0A075B7D4 117 aa2.79□□□□□ -1.96
RTN1-207ENST00000490111 TRAV2A0A0B4J234 112 aa2.79□□□□□ -1.96
RTN1-207ENST00000490111 SYNGR2O43760 224 aa2.79□□□□□ -1.96
RTN1-207ENST00000490111 PITX3O75364 302 aa2.79□□□□□ -1.96
RTN1-207ENST00000490111 SPINK8P0C7L1 97 aa2.79□□□□□ -1.96
RTN1-207ENST00000490111 HTN1P15515 57 aa2.79□□□□□ -1.96
RTN1-207ENST00000490111 ZNF90Q03938 601 aa2.79□□□□□ -1.96
RTN1-207ENST00000490111 C2orf83Q53S99 150 aa2.79□□□□□ -1.96
RTN1-207ENST00000490111 SOSTDC1Q6X4U4 206 aa2.79□□□□□ -1.96
RTN1-207ENST00000490111 SDIM1Q6ZPB5 146 aa2.79□□□□□ -1.96
RTN1-207ENST00000490111 Q9H521 79 aa2.79□□□□□ -1.96
RTN1-207ENST00000490111 FKBP11Q9NYL4 201 aa2.79□□□□□ -1.96
RTN1-207ENST00000490111 ICOSQ9Y6W8 199 aa2.79□□□□□ -1.96
RTN1-207ENST00000490111 FSIP2Q5CZC0 6907 aa2.78□□□□□ -1.96
RTN1-207ENST00000490111 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms