RNA–Protein interactions for RNA: ENST00000489808.1

EPHB4-207, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-207ENST00000489808 TMEM141Q96I45 108 aa12.18□□□□□ -0.46
EPHB4-207ENST00000489808 IGLV4-69A0A075B6H9 119 aa12.17□□□□□ -0.46
EPHB4-207ENST00000489808 APOMO95445 188 aa12.17□□□□□ -0.46
EPHB4-207ENST00000489808 APOC3P02656 99 aa12.17□□□□□ -0.46
EPHB4-207ENST00000489808 SYCNQ0VAF6 134 aa12.17□□□□□ -0.46
EPHB4-207ENST00000489808 SPACA4Q8TDM5 124 aa12.17□□□□□ -0.46
EPHB4-207ENST00000489808 CARD19Q96LW7 228 aa12.17□□□□□ -0.46
EPHB4-207ENST00000489808 ALKBH7Q9BT30 221 aaPredicted RBP12.17□□□□□ -0.46
EPHB4-207ENST00000489808 A0A087WYN8 130 aa12.15□□□□□ -0.46
EPHB4-207ENST00000489808 IGIPA6NJ69 53 aa12.15□□□□□ -0.46
EPHB4-207ENST00000489808 MT-ND6P03923 174 aa12.15□□□□□ -0.46
EPHB4-207ENST00000489808 G0S2P27469 103 aa12.15□□□□□ -0.46
EPHB4-207ENST00000489808 KRTAP10-4P60372 401 aaPredicted RBP12.15□□□□□ -0.46
EPHB4-207ENST00000489808 FABP9Q0Z7S8 132 aa12.15□□□□□ -0.46
EPHB4-207ENST00000489808 MRPL18Q9H0U6 180 aaKnown RBP12.15□□□□□ -0.46
EPHB4-207ENST00000489808 NPSP0C0P6 89 aa12.14□□□□□ -0.47
EPHB4-207ENST00000489808 NDUFA5Q16718 116 aa12.14□□□□□ -0.47
EPHB4-207ENST00000489808 LINC00242Q5T6M2 205 aa12.14□□□□□ -0.47
EPHB4-207ENST00000489808 TEX43Q6ZNM6 134 aa12.14□□□□□ -0.47
EPHB4-207ENST00000489808 SVBPQ8N300 66 aa12.14□□□□□ -0.47
EPHB4-207ENST00000489808 C2orf48Q96LS8 159 aa12.14□□□□□ -0.47
EPHB4-207ENST00000489808 AMELXQ99217 191 aa12.14□□□□□ -0.47
EPHB4-207ENST00000489808 VCX2Q9H322 139 aa12.14□□□□□ -0.47
EPHB4-207ENST00000489808 TGIF2-C20orf24A0A0A6YYL0 155 aa12.13□□□□□ -0.47
EPHB4-207ENST00000489808 SNAPINO95295 136 aa12.13□□□□□ -0.47
EPHB4-207ENST00000489808 Q6ZN92 141 aa12.13□□□□□ -0.47
EPHB4-207ENST00000489808 Q6ZRU5 148 aa12.13□□□□□ -0.47
EPHB4-207ENST00000489808 PLAC8Q9NZF1 115 aa12.13□□□□□ -0.47
EPHB4-207ENST00000489808 MYCBP2O75592 4640 aa12.13□□□□□ -0.47
EPHB4-207ENST00000489808 IGKV2-24A0A0C4DH68 120 aa12.12□□□□□ -0.47
EPHB4-207ENST00000489808 UBE2D1P51668 147 aa12.12□□□□□ -0.47
EPHB4-207ENST00000489808 MAJINQ3KP22 176 aa12.12□□□□□ -0.47
EPHB4-207ENST00000489808 ZC2HC1BQ5TFG8 222 aa12.12□□□□□ -0.47
EPHB4-207ENST00000489808 OR10D4PQ8NGN7 298 aa12.12□□□□□ -0.47
EPHB4-207ENST00000489808 TOMM6Q96B49 74 aa12.12□□□□□ -0.47
EPHB4-207ENST00000489808 CAMK2N2Q96S95 79 aa12.12□□□□□ -0.47
EPHB4-207ENST00000489808 PKIGQ9Y2B9 76 aa12.12□□□□□ -0.47
EPHB4-207ENST00000489808 A0A096LNI7 61 aa12.11□□□□□ -0.47
EPHB4-207ENST00000489808 LINC01546A6NGU7 62 aa12.11□□□□□ -0.47
EPHB4-207ENST00000489808 SPAG11BQ08648 103 aa12.11□□□□□ -0.47
EPHB4-207ENST00000489808 LINC00173Q6ZV60 143 aa12.11□□□□□ -0.47
EPHB4-207ENST00000489808 C2orf88Q9BSF0 95 aa12.11□□□□□ -0.47
EPHB4-207ENST00000489808 FLG2Q5D862 2391 aaPredicted RBP12.1□□□□□ -0.47
EPHB4-207ENST00000489808 A0A087WZ39 114 aa12.1□□□□□ -0.47
EPHB4-207ENST00000489808 RPL37AP61513 92 aaKnown RBP12.1□□□□□ -0.47
EPHB4-207ENST00000489808 ORAOV1Q8WV07 137 aa12.1□□□□□ -0.47
EPHB4-207ENST00000489808 LINC00474Q9P2X8 69 aa12.1□□□□□ -0.47
EPHB4-207ENST00000489808 TIMM17AQ99595 171 aa12.09□□□□□ -0.47
EPHB4-207ENST00000489808 TRAPPC1Q9Y5R8 145 aa12.09□□□□□ -0.47
EPHB4-207ENST00000489808 F8WDY8 70 aa12.08□□□□□ -0.48
EPHB4-207ENST00000489808 PAPPA-AS1Q5QFB9 102 aa12.08□□□□□ -0.48
EPHB4-207ENST00000489808 ERASQ7Z444 233 aa12.08□□□□□ -0.48
EPHB4-207ENST00000489808 STPG4Q8N801 248 aa12.08□□□□□ -0.48
EPHB4-207ENST00000489808 FAM19A3Q7Z5A8 133 aa12.07□□□□□ -0.48
EPHB4-207ENST00000489808 SCGB3A1Q96QR1 104 aa12.07□□□□□ -0.48
EPHB4-207ENST00000489808 LOC107984640A0A0U1RRK4 108 aa12.06□□□□□ -0.48
EPHB4-207ENST00000489808 RNF151Q2KHN1 245 aa12.06□□□□□ -0.48
EPHB4-207ENST00000489808 FA2HQ7L5A8 372 aa12.06□□□□□ -0.48
EPHB4-207ENST00000489808 LINC01561Q8N1V8 128 aa12.06□□□□□ -0.48
EPHB4-207ENST00000489808 LINC01549A6NIU2 74 aa12.05□□□□□ -0.48
EPHB4-207ENST00000489808 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.05□□□□□ -0.48
EPHB4-207ENST00000489808 PTTG1IPP53801 180 aa12.05□□□□□ -0.48
EPHB4-207ENST00000489808 GAGE2BQ13066 116 aa12.05□□□□□ -0.48
EPHB4-207ENST00000489808 KIAA0087Q14695 138 aa12.05□□□□□ -0.48
EPHB4-207ENST00000489808 MRPL35Q9NZE8 188 aaKnown RBP12.05□□□□□ -0.48
EPHB4-207ENST00000489808 A0A0J9YXV3 536 aa12.04□□□□□ -0.48
EPHB4-207ENST00000489808 YPEL4Q96NS1 127 aa12.04□□□□□ -0.48
EPHB4-207ENST00000489808 SMCO4Q9NRQ5 59 aa12.04□□□□□ -0.48
EPHB4-207ENST00000489808 NDUFA1O15239 70 aa12.03□□□□□ -0.48
EPHB4-207ENST00000489808 SEC11AP67812 179 aa12.03□□□□□ -0.48
EPHB4-207ENST00000489808 C10orf25Q5T742 122 aa12.03□□□□□ -0.48
EPHB4-207ENST00000489808 UNQ6190/PRO20217Q6UXQ8 127 aa12.03□□□□□ -0.48
EPHB4-207ENST00000489808 HERC1Q15751 4861 aa12.03□□□□□ -0.48
EPHB4-207ENST00000489808 C7orf33Q8WU49 177 aa12.02□□□□□ -0.49
EPHB4-207ENST00000489808 LINC00614P0C842 121 aa12.01□□□□□ -0.49
EPHB4-207ENST00000489808 HERVK_113P63121 156 aa12.01□□□□□ -0.49
EPHB4-207ENST00000489808 C18orf32Q8TCD1 76 aa12.01□□□□□ -0.49
EPHB4-207ENST00000489808 PKHD1L1Q86WI1 4243 aa12.01□□□□□ -0.49
EPHB4-207ENST00000489808 URB1-AS1Q96HZ7 61 aa12□□□□□ -0.49
EPHB4-207ENST00000489808 LRP1Q07954 4544 aaKnown RBP11.99□□□□□ -0.49
EPHB4-207ENST00000489808 HNRNPA3P51991 378 aaKnown RBP11.99□□□□□ -0.49
EPHB4-207ENST00000489808 RPL18AQ02543 176 aaKnown RBP11.99□□□□□ -0.49
EPHB4-207ENST00000489808 SLC7A5P1Q8MH63 180 aa11.99□□□□□ -0.49
EPHB4-207ENST00000489808 CST9LQ9H4G1 147 aa11.99□□□□□ -0.49
EPHB4-207ENST00000489808 GEMIN7Q9H840 131 aaKnown RBP11.99□□□□□ -0.49
EPHB4-207ENST00000489808 C6orf48Q9UBA6 75 aa11.99□□□□□ -0.49
EPHB4-207ENST00000489808 CDKN2A-AS1Q9UH64 79 aa11.99□□□□□ -0.49
EPHB4-207ENST00000489808 FAT3Q8TDW7 4589 aa11.99□□□□□ -0.49
EPHB4-207ENST00000489808 A0A1W2PNN7 141 aa11.98□□□□□ -0.49
EPHB4-207ENST00000489808 KRTAP29-1A8MX34 341 aaPredicted RBP11.98□□□□□ -0.49
EPHB4-207ENST00000489808 TLX1NBP0CAT3 122 aa11.97□□□□□ -0.49
EPHB4-207ENST00000489808 C2orf82Q6UX34 121 aa11.97□□□□□ -0.49
EPHB4-207ENST00000489808 A0A096LNJ9 63 aa11.96□□□□□ -0.49
EPHB4-207ENST00000489808 TINCRA0A1B0GVN0 87 aa11.96□□□□□ -0.49
EPHB4-207ENST00000489808 PMVKQ15126 192 aa11.96□□□□□ -0.49
EPHB4-207ENST00000489808 TRBV30A0A0K0K1B3 111 aa11.95□□□□□ -0.5
EPHB4-207ENST00000489808 J3QL48 77 aa11.95□□□□□ -0.5
EPHB4-207ENST00000489808 PRSS2P07478 247 aa11.95□□□□□ -0.5
EPHB4-207ENST00000489808 RAB5BP61020 215 aa11.95□□□□□ -0.5
EPHB4-207ENST00000489808 C9orf116Q5BN46 136 aaPredicted RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms