RNA–Protein interactions for RNA: ENST00000489758.1

CLIC4-203, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 439 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-203ENST00000489758 A0A0J9YXV3 536 aa10.59□□□□□ -0.71
CLIC4-203ENST00000489758 USP17L23D6RBM5 183 aa10.59□□□□□ -0.71
CLIC4-203ENST00000489758 PRSS1P07477 247 aa10.59□□□□□ -0.71
CLIC4-203ENST00000489758 PACRGQ96M98 296 aaPredicted RBP10.59□□□□□ -0.71
CLIC4-203ENST00000489758 FAT2Q9NYQ8 4349 aa10.59□□□□□ -0.71
CLIC4-203ENST00000489758 IGLV4-69A0A075B6H9 119 aa10.58□□□□□ -0.72
CLIC4-203ENST00000489758 TRAV12-1A0A0B4J245 112 aa10.58□□□□□ -0.72
CLIC4-203ENST00000489758 A0A1B0GVY2 172 aa10.58□□□□□ -0.72
CLIC4-203ENST00000489758 HIST3H2BBQ8N257 126 aa10.58□□□□□ -0.72
CLIC4-203ENST00000489758 C15orf56Q8N910 161 aa10.58□□□□□ -0.72
CLIC4-203ENST00000489758 TINCRA0A1B0GVN0 87 aa10.57□□□□□ -0.72
CLIC4-203ENST00000489758 COX7A2LO14548 114 aa10.57□□□□□ -0.72
CLIC4-203ENST00000489758 C5orf38Q86SI9 138 aa10.57□□□□□ -0.72
CLIC4-203ENST00000489758 S100A6P06703 90 aa10.56□□□□□ -0.72
CLIC4-203ENST00000489758 IGLC3P0DOY3 106 aa10.56□□□□□ -0.72
CLIC4-203ENST00000489758 HERVK_113P63121 156 aa10.56□□□□□ -0.72
CLIC4-203ENST00000489758 SEC11AP67812 179 aa10.56□□□□□ -0.72
CLIC4-203ENST00000489758 Q8N814 137 aa10.56□□□□□ -0.72
CLIC4-203ENST00000489758 IGLV5-45A0A087WSX0 123 aa10.55□□□□□ -0.72
CLIC4-203ENST00000489758 A0A087WZ39 114 aa10.55□□□□□ -0.72
CLIC4-203ENST00000489758 GEMIN7Q9H840 131 aaKnown RBP10.55□□□□□ -0.72
CLIC4-203ENST00000489758 CDKN2A-AS1Q9UH64 79 aa10.55□□□□□ -0.72
CLIC4-203ENST00000489758 CHTOPQ9Y3Y2 248 aaKnown RBP10.55□□□□□ -0.72
CLIC4-203ENST00000489758 C5orf52A6NGY3 159 aa10.54□□□□□ -0.72
CLIC4-203ENST00000489758 SNRPEP62304 92 aaKnown RBP10.54□□□□□ -0.72
CLIC4-203ENST00000489758 ODF1Q14990 250 aa10.54□□□□□ -0.72
CLIC4-203ENST00000489758 MAP1LC3CQ9BXW4 147 aa10.54□□□□□ -0.72
CLIC4-203ENST00000489758 IGHV1-58A0A0C4DH39 117 aa10.53□□□□□ -0.72
CLIC4-203ENST00000489758 C11orf86A6NJI1 115 aa10.53□□□□□ -0.72
CLIC4-203ENST00000489758 H0Y8G0 127 aa10.53□□□□□ -0.72
CLIC4-203ENST00000489758 EREGO14944 169 aa10.53□□□□□ -0.72
CLIC4-203ENST00000489758 KRTAP10-2P60368 255 aa10.53□□□□□ -0.72
CLIC4-203ENST00000489758 CFAP161Q6P656 301 aa10.53□□□□□ -0.72
CLIC4-203ENST00000489758 LINC01561Q8N1V8 128 aa10.53□□□□□ -0.72
CLIC4-203ENST00000489758 HIST1H2BLQ99880 126 aa10.53□□□□□ -0.72
CLIC4-203ENST00000489758 CHAC1Q9BUX1 264 aa10.53□□□□□ -0.72
CLIC4-203ENST00000489758 MRPL35Q9NZE8 188 aaKnown RBP10.53□□□□□ -0.72
CLIC4-203ENST00000489758 GVQW2A0A096LPI5 108 aaPredicted RBP10.52□□□□□ -0.73
CLIC4-203ENST00000489758 F8VRH5 84 aa10.52□□□□□ -0.73
CLIC4-203ENST00000489758 SYS1-DBNDD2H3BUS1 97 aa10.52□□□□□ -0.73
CLIC4-203ENST00000489758 MALP21145 153 aa10.52□□□□□ -0.73
CLIC4-203ENST00000489758 C14orf177Q52M58 125 aa10.52□□□□□ -0.73
CLIC4-203ENST00000489758 SPATA12Q7Z6I5 190 aa10.52□□□□□ -0.73
CLIC4-203ENST00000489758 IGHV3-64A0A075B6Q5 118 aa10.51□□□□□ -0.73
CLIC4-203ENST00000489758 HIGD2BQ4VC39 106 aa10.51□□□□□ -0.73
CLIC4-203ENST00000489758 LINC00469Q8N7U9 141 aa10.51□□□□□ -0.73
CLIC4-203ENST00000489758 hDV102S1A0JD36 115 aa10.5□□□□□ -0.73
CLIC4-203ENST00000489758 C3orf79P0CE67 100 aa10.5□□□□□ -0.73
CLIC4-203ENST00000489758 ZNF22P17026 224 aaPredicted RBP10.5□□□□□ -0.73
CLIC4-203ENST00000489758 S100A2P29034 98 aa10.5□□□□□ -0.73
CLIC4-203ENST00000489758 FUSP35637 526 aaKnown RBP eCLIP10.5□□□□□ -0.73
CLIC4-203ENST00000489758 NTN5Q8WTR8 489 aaPredicted RBP10.5□□□□□ -0.73
CLIC4-203ENST00000489758 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.49□□□□□ -0.73
CLIC4-203ENST00000489758 APOMO95445 188 aa10.49□□□□□ -0.73
CLIC4-203ENST00000489758 SLPIP03973 132 aa10.49□□□□□ -0.73
CLIC4-203ENST00000489758 OR10D4PQ8NGN7 298 aa10.49□□□□□ -0.73
CLIC4-203ENST00000489758 PMCHL2Q9BQD1 86 aa10.49□□□□□ -0.73
CLIC4-203ENST00000489758 KRTAP17-1Q9BYP8 105 aa10.49□□□□□ -0.73
CLIC4-203ENST00000489758 TMA7Q9Y2S6 64 aaKnown RBP10.49□□□□□ -0.73
CLIC4-203ENST00000489758 PKD1P98161 4303 aa10.49□□□□□ -0.73
CLIC4-203ENST00000489758 SMIM1B2RUZ4 78 aa10.48□□□□□ -0.73
CLIC4-203ENST00000489758 KRTDAPP60985 99 aa10.48□□□□□ -0.73
CLIC4-203ENST00000489758 LINC01545Q5VT33 79 aa10.48□□□□□ -0.73
CLIC4-203ENST00000489758 PET117Q6UWS5 81 aa10.48□□□□□ -0.73
CLIC4-203ENST00000489758 ORAOV1Q8WV07 137 aa10.48□□□□□ -0.73
CLIC4-203ENST00000489758 LINC00526Q96FQ7 95 aa10.48□□□□□ -0.73
CLIC4-203ENST00000489758 DNAH11Q96DT5 4516 aa10.48□□□□□ -0.73
CLIC4-203ENST00000489758 HECTD4Q9Y4D8 3996 aa10.48□□□□□ -0.73
CLIC4-203ENST00000489758 KIAA0087Q14695 138 aa10.47□□□□□ -0.73
CLIC4-203ENST00000489758 PGPEP1Q9NXJ5 209 aa10.47□□□□□ -0.73
CLIC4-203ENST00000489758 H3BRM9 83 aa10.46□□□□□ -0.73
CLIC4-203ENST00000489758 SPINK8P0C7L1 97 aa10.46□□□□□ -0.73
CLIC4-203ENST00000489758 PLNP26678 52 aa10.46□□□□□ -0.73
CLIC4-203ENST00000489758 CNBPP62633 177 aaKnown RBP10.46□□□□□ -0.73
CLIC4-203ENST00000489758 SPAG11BQ08648 103 aa10.46□□□□□ -0.73
CLIC4-203ENST00000489758 CDPF1Q6NVV7 123 aa10.46□□□□□ -0.73
CLIC4-203ENST00000489758 ZNF561-AS1K7EIQ3 104 aa10.45□□□□□ -0.74
CLIC4-203ENST00000489758 DPM2O94777 84 aa10.45□□□□□ -0.74
CLIC4-203ENST00000489758 TMEM170BQ5T4T1 132 aa10.45□□□□□ -0.74
CLIC4-203ENST00000489758 IGLV5-52A0A0A0MRZ9 124 aa10.44□□□□□ -0.74
CLIC4-203ENST00000489758 IGLV5-39A0A0G2JS06 123 aa10.44□□□□□ -0.74
CLIC4-203ENST00000489758 TMEM223A0PJW6 202 aa10.44□□□□□ -0.74
CLIC4-203ENST00000489758 C2orf48Q96LS8 159 aa10.44□□□□□ -0.74
CLIC4-203ENST00000489758 IGKCP01834 107 aa10.43□□□□□ -0.74
CLIC4-203ENST00000489758 Q8IZM0 81 aa10.43□□□□□ -0.74
CLIC4-203ENST00000489758 SYCNQ0VAF6 134 aa10.41□□□□□ -0.74
CLIC4-203ENST00000489758 Q6ZRU5 148 aa10.41□□□□□ -0.74
CLIC4-203ENST00000489758 C9orf163Q8N9P6 203 aa10.41□□□□□ -0.74
CLIC4-203ENST00000489758 COX7B2Q8TF08 81 aa10.41□□□□□ -0.74
CLIC4-203ENST00000489758 TOMM7Q9P0U1 55 aa10.41□□□□□ -0.74
CLIC4-203ENST00000489758 F8WDY8 70 aa10.4□□□□□ -0.74
CLIC4-203ENST00000489758 LINC01620Q4KN68 170 aa10.4□□□□□ -0.74
CLIC4-203ENST00000489758 C10orf25Q5T742 122 aa10.4□□□□□ -0.74
CLIC4-203ENST00000489758 CAMK2N2Q96S95 79 aa10.4□□□□□ -0.74
CLIC4-203ENST00000489758 PRSS2P07478 247 aa10.39□□□□□ -0.75
CLIC4-203ENST00000489758 C6orf226Q5I0X4 101 aa10.39□□□□□ -0.75
CLIC4-203ENST00000489758 C2orf82Q6UX34 121 aa10.39□□□□□ -0.75
CLIC4-203ENST00000489758 UNQ6190/PRO20217Q6UXQ8 127 aa10.39□□□□□ -0.75
CLIC4-203ENST00000489758 CARD19Q96LW7 228 aa10.39□□□□□ -0.75
CLIC4-203ENST00000489758 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 234.9 ms