RNA–Protein interactions for RNA: ENST00000489583.1

APTX-229, Transcript of aprataxin, humanhuman

TSL 3

Gene APTX, Length 397 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-229ENST00000489583 SMIM2Q9BVW6 85 aa12.23□□□□□ -0.45
APTX-229ENST00000489583 S100A1P23297 94 aa12.22□□□□□ -0.45
APTX-229ENST00000489583 SPINK6Q6UWN8 80 aa12.22□□□□□ -0.45
APTX-229ENST00000489583 CARD19Q96LW7 228 aa12.22□□□□□ -0.45
APTX-229ENST00000489583 YPEL4Q96NS1 127 aa12.22□□□□□ -0.45
APTX-229ENST00000489583 A0A096LNI7 61 aa12.21□□□□□ -0.45
APTX-229ENST00000489583 TSHBP01222 138 aa12.21□□□□□ -0.45
APTX-229ENST00000489583 KIAA1644Q3SXP7 199 aa12.21□□□□□ -0.45
APTX-229ENST00000489583 PRSS47A8MTI9 375 aa12.2□□□□□ -0.46
APTX-229ENST00000489583 CCL25O15444 150 aa12.2□□□□□ -0.46
APTX-229ENST00000489583 RAB5AP20339 215 aa12.2□□□□□ -0.46
APTX-229ENST00000489583 FOXI1Q12951 378 aa12.2□□□□□ -0.46
APTX-229ENST00000489583 Q6ZRP5 223 aa12.2□□□□□ -0.46
APTX-229ENST00000489583 LOC389332A0A1B0GUA5 103 aa12.19□□□□□ -0.46
APTX-229ENST00000489583 SMAGPQ0VAQ4 97 aa12.19□□□□□ -0.46
APTX-229ENST00000489583 LINC00959A0A1B0GUT2 108 aa12.18□□□□□ -0.46
APTX-229ENST00000489583 MALP21145 153 aa12.18□□□□□ -0.46
APTX-229ENST00000489583 TMEM18Q96B42 140 aa12.18□□□□□ -0.46
APTX-229ENST00000489583 A0A0J9YXV3 536 aa12.17□□□□□ -0.46
APTX-229ENST00000489583 ATP6V1G1O75348 118 aa12.17□□□□□ -0.46
APTX-229ENST00000489583 SYCNQ0VAF6 134 aa12.17□□□□□ -0.46
APTX-229ENST00000489583 Q8N8P6 123 aa12.17□□□□□ -0.46
APTX-229ENST00000489583 ALKBH7Q9BT30 221 aaPredicted RBP12.17□□□□□ -0.46
APTX-229ENST00000489583 NXT2Q9NPJ8 142 aaKnown RBP12.17□□□□□ -0.46
APTX-229ENST00000489583 K7EMI3 77 aa12.16□□□□□ -0.46
APTX-229ENST00000489583 ESDP10768 282 aa12.16□□□□□ -0.46
APTX-229ENST00000489583 CD164L2Q6UWJ8 174 aa12.15□□□□□ -0.46
APTX-229ENST00000489583 LOC107984640A0A0U1RRK4 108 aa12.14□□□□□ -0.47
APTX-229ENST00000489583 LINC00526Q96FQ7 95 aa12.14□□□□□ -0.47
APTX-229ENST00000489583 SCO1O75880 301 aa12.13□□□□□ -0.47
APTX-229ENST00000489583 GAGE2BQ13066 116 aa12.13□□□□□ -0.47
APTX-229ENST00000489583 ORMDL2Q53FV1 153 aa12.13□□□□□ -0.47
APTX-229ENST00000489583 ZNF664Q8N3J9 261 aa12.13□□□□□ -0.47
APTX-229ENST00000489583 COLCA2A8K830 154 aa12.12□□□□□ -0.47
APTX-229ENST00000489583 C1orf196B1AJZ1 125 aa12.12□□□□□ -0.47
APTX-229ENST00000489583 G0S2P27469 103 aa12.12□□□□□ -0.47
APTX-229ENST00000489583 IFI27P40305 119 aaPredicted RBP12.12□□□□□ -0.47
APTX-229ENST00000489583 COX7A2LO14548 114 aa12.11□□□□□ -0.47
APTX-229ENST00000489583 MRPL52Q86TS9 123 aaKnown RBP12.11□□□□□ -0.47
APTX-229ENST00000489583 CDC42SE2Q9NRR3 84 aa12.11□□□□□ -0.47
APTX-229ENST00000489583 PTTG1IPP53801 180 aa12.1□□□□□ -0.47
APTX-229ENST00000489583 FA2HQ7L5A8 372 aa12.1□□□□□ -0.47
APTX-229ENST00000489583 CAMK2N2Q96S95 79 aa12.1□□□□□ -0.47
APTX-229ENST00000489583 IGLV4-69A0A075B6H9 119 aa12.09□□□□□ -0.47
APTX-229ENST00000489583 APOMO95445 188 aa12.09□□□□□ -0.47
APTX-229ENST00000489583 TRGC2P03986 189 aa12.08□□□□□ -0.48
APTX-229ENST00000489583 RAB5BP61020 215 aa12.08□□□□□ -0.48
APTX-229ENST00000489583 TIMM21Q9BVV7 248 aa12.08□□□□□ -0.48
APTX-229ENST00000489583 CYSLTR1Q9Y271 337 aa12.08□□□□□ -0.48
APTX-229ENST00000489583 CSDC2Q9Y534 153 aaKnown RBP12.08□□□□□ -0.48
APTX-229ENST00000489583 KRTAP10-8P60410 259 aa12.07□□□□□ -0.48
APTX-229ENST00000489583 C18orf32Q8TCD1 76 aa12.07□□□□□ -0.48
APTX-229ENST00000489583 SPANXA1Q9NS26 97 aa12.07□□□□□ -0.48
APTX-229ENST00000489583 UBE2D4Q9Y2X8 147 aa12.07□□□□□ -0.48
APTX-229ENST00000489583 RPL18AQ02543 176 aaKnown RBP12.06□□□□□ -0.48
APTX-229ENST00000489583 LINC01549A6NIU2 74 aa12.05□□□□□ -0.48
APTX-229ENST00000489583 RPL39P62891 51 aaKnown RBP12.05□□□□□ -0.48
APTX-229ENST00000489583 SRSF9Q13242 221 aaKnown RBP eCLIP12.05□□□□□ -0.48
APTX-229ENST00000489583 C2orf66Q6UXQ4 117 aa12.05□□□□□ -0.48
APTX-229ENST00000489583 TRAV13-1A0A0B4J241 112 aa12.04□□□□□ -0.48
APTX-229ENST00000489583 LINC01546A6NGU7 62 aa12.04□□□□□ -0.48
APTX-229ENST00000489583 LINC00614P0C842 121 aa12.04□□□□□ -0.48
APTX-229ENST00000489583 ODF1Q14990 250 aa12.04□□□□□ -0.48
APTX-229ENST00000489583 LRP2P98164 4655 aa12.04□□□□□ -0.48
APTX-229ENST00000489583 TNXBP22105 4242 aa12.03□□□□□ -0.48
APTX-229ENST00000489583 RNF213Q63HN8 5207 aa12.03□□□□□ -0.48
APTX-229ENST00000489583 C2orf48Q96LS8 159 aa12.03□□□□□ -0.48
APTX-229ENST00000489583 PYGO1Q9Y3Y4 419 aa12.03□□□□□ -0.48
APTX-229ENST00000489583 MRPS36P82909 103 aaKnown RBP12.01□□□□□ -0.49
APTX-229ENST00000489583 C9orf116Q5BN46 136 aaPredicted RBP12.01□□□□□ -0.49
APTX-229ENST00000489583 C1orf137Q5JT78 98 aa12.01□□□□□ -0.49
APTX-229ENST00000489583 BAGE3Q86Y29 109 aa12.01□□□□□ -0.49
APTX-229ENST00000489583 NPSP0C0P6 89 aa12□□□□□ -0.49
APTX-229ENST00000489583 PAPPA-AS1Q5QFB9 102 aa12□□□□□ -0.49
APTX-229ENST00000489583 Q6ZN92 141 aa12□□□□□ -0.49
APTX-229ENST00000489583 C5orf38Q86SI9 138 aa12□□□□□ -0.49
APTX-229ENST00000489583 TOMM6Q96B49 74 aa12□□□□□ -0.49
APTX-229ENST00000489583 CHCHD1Q96BP2 118 aaKnown RBP12□□□□□ -0.49
APTX-229ENST00000489583 SPAG11BQ08648 103 aa11.99□□□□□ -0.49
APTX-229ENST00000489583 RNASE13Q5GAN3 156 aaKnown RBP11.99□□□□□ -0.49
APTX-229ENST00000489583 Q6ZUT4 128 aa11.99□□□□□ -0.49
APTX-229ENST00000489583 PSORS1C2Q9UIG4 136 aa11.99□□□□□ -0.49
APTX-229ENST00000489583 A0A1W2PNN7 141 aa11.98□□□□□ -0.49
APTX-229ENST00000489583 OR10D4PQ8NGN7 298 aa11.98□□□□□ -0.49
APTX-229ENST00000489583 TMEM141Q96I45 108 aa11.98□□□□□ -0.49
APTX-229ENST00000489583 SCGB3A1Q96QR1 104 aa11.98□□□□□ -0.49
APTX-229ENST00000489583 RNF151Q2KHN1 245 aa11.97□□□□□ -0.49
APTX-229ENST00000489583 DIRC1Q969H9 104 aa11.97□□□□□ -0.49
APTX-229ENST00000489583 TIMM17AQ99595 171 aa11.97□□□□□ -0.49
APTX-229ENST00000489583 IGLV4-3A0A075B6K6 122 aa11.96□□□□□ -0.49
APTX-229ENST00000489583 F8WDY8 70 aa11.96□□□□□ -0.49
APTX-229ENST00000489583 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.96□□□□□ -0.49
APTX-229ENST00000489583 HBDP02042 147 aa11.96□□□□□ -0.49
APTX-229ENST00000489583 TEX43Q6ZNM6 134 aa11.96□□□□□ -0.49
APTX-229ENST00000489583 ERASQ7Z444 233 aa11.96□□□□□ -0.49
APTX-229ENST00000489583 URB1-AS1Q96HZ7 61 aa11.96□□□□□ -0.49
APTX-229ENST00000489583 OPRPNQ99935 248 aaPredicted RBP11.96□□□□□ -0.49
APTX-229ENST00000489583 C2orf88Q9BSF0 95 aa11.96□□□□□ -0.49
APTX-229ENST00000489583 IGIPA6NJ69 53 aa11.95□□□□□ -0.5
APTX-229ENST00000489583 IFITM10A6NMD0 228 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms