RNA–Protein interactions for RNA: ENST00000489469.5

SMIM11A-206, Transcript of small integral membrane protein 11A, humanhuman

TSL 2

Gene SMIM11A, Length 780 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-206ENST00000489469 HSBP1O75506 76 aa10.16□□□□□ -0.78
SMIM11A-206ENST00000489469 SEC11AP67812 179 aa10.16□□□□□ -0.78
SMIM11A-206ENST00000489469 LINC00173Q6ZV60 143 aa10.16□□□□□ -0.78
SMIM11A-206ENST00000489469 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.15□□□□□ -0.78
SMIM11A-206ENST00000489469 ATP5LO75964 103 aa10.15□□□□□ -0.78
SMIM11A-206ENST00000489469 MALP21145 153 aa10.15□□□□□ -0.78
SMIM11A-206ENST00000489469 UBE2D1P51668 147 aa10.15□□□□□ -0.78
SMIM11A-206ENST00000489469 FAM19A3Q7Z5A8 133 aa10.15□□□□□ -0.78
SMIM11A-206ENST00000489469 PKHD1P08F94 4074 aa10.15□□□□□ -0.78
SMIM11A-206ENST00000489469 EPPK1P58107 5090 aaKnown RBP10.14□□□□□ -0.79
SMIM11A-206ENST00000489469 hDV102S1A0JD36 115 aa10.14□□□□□ -0.79
SMIM11A-206ENST00000489469 APOMO95445 188 aa10.14□□□□□ -0.79
SMIM11A-206ENST00000489469 PRSS1P07477 247 aa10.14□□□□□ -0.79
SMIM11A-206ENST00000489469 PDZD11Q5EBL8 140 aa10.14□□□□□ -0.79
SMIM11A-206ENST00000489469 LINC00242Q5T6M2 205 aa10.14□□□□□ -0.79
SMIM11A-206ENST00000489469 C15orf56Q8N910 161 aa10.14□□□□□ -0.79
SMIM11A-206ENST00000489469 DNAH11Q96DT5 4516 aa10.14□□□□□ -0.79
SMIM11A-206ENST00000489469 GVQW2A0A096LPI5 108 aaPredicted RBP10.13□□□□□ -0.79
SMIM11A-206ENST00000489469 IGHV3OR16-9A0A0B4J2B5 98 aa10.13□□□□□ -0.79
SMIM11A-206ENST00000489469 GCSHP23434 173 aa10.13□□□□□ -0.79
SMIM11A-206ENST00000489469 PMVKQ15126 192 aa10.13□□□□□ -0.79
SMIM11A-206ENST00000489469 PMCHL1Q16048 86 aa10.13□□□□□ -0.79
SMIM11A-206ENST00000489469 SERF1AO75920 110 aa10.12□□□□□ -0.79
SMIM11A-206ENST00000489469 HERVK_113P63121 156 aa10.12□□□□□ -0.79
SMIM11A-206ENST00000489469 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.11□□□□□ -0.79
SMIM11A-206ENST00000489469 HIST1H2BKO60814 126 aa10.11□□□□□ -0.79
SMIM11A-206ENST00000489469 HIST1H2BJP06899 126 aa10.11□□□□□ -0.79
SMIM11A-206ENST00000489469 HIST1H2BOP23527 126 aa10.11□□□□□ -0.79
SMIM11A-206ENST00000489469 HIST1H2BBP33778 126 aa10.11□□□□□ -0.79
SMIM11A-206ENST00000489469 HIST1H2BDP58876 126 aa10.11□□□□□ -0.79
SMIM11A-206ENST00000489469 CNBPP62633 177 aaKnown RBP10.11□□□□□ -0.79
SMIM11A-206ENST00000489469 HIST1H2BCP62807 126 aa10.11□□□□□ -0.79
SMIM11A-206ENST00000489469 HIST2H2BEQ16778 126 aa10.11□□□□□ -0.79
SMIM11A-206ENST00000489469 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.11□□□□□ -0.79
SMIM11A-206ENST00000489469 ZC2HC1BQ5TFG8 222 aa10.11□□□□□ -0.79
SMIM11A-206ENST00000489469 C5orf38Q86SI9 138 aa10.11□□□□□ -0.79
SMIM11A-206ENST00000489469 LINC01561Q8N1V8 128 aa10.11□□□□□ -0.79
SMIM11A-206ENST00000489469 HIST1H2BHQ93079 126 aa10.11□□□□□ -0.79
SMIM11A-206ENST00000489469 HIST1H2BNQ99877 126 aa10.11□□□□□ -0.79
SMIM11A-206ENST00000489469 HIST1H2BMQ99879 126 aa10.11□□□□□ -0.79
SMIM11A-206ENST00000489469 A0A087WZ39 114 aa10.1□□□□□ -0.79
SMIM11A-206ENST00000489469 CST9LQ9H4G1 147 aa10.1□□□□□ -0.79
SMIM11A-206ENST00000489469 GEMIN7Q9H840 131 aaKnown RBP10.1□□□□□ -0.79
SMIM11A-206ENST00000489469 ZNF561-AS1K7EIQ3 104 aa10.09□□□□□ -0.79
SMIM11A-206ENST00000489469 FUSP35637 526 aaKnown RBP eCLIP10.09□□□□□ -0.79
SMIM11A-206ENST00000489469 LINC00310P59036 64 aa10.09□□□□□ -0.79
SMIM11A-206ENST00000489469 HIGD2BQ4VC39 106 aa10.09□□□□□ -0.79
SMIM11A-206ENST00000489469 XP32Q5T750 250 aa10.09□□□□□ -0.79
SMIM11A-206ENST00000489469 OR10D4PQ8NGN7 298 aa10.09□□□□□ -0.79
SMIM11A-206ENST00000489469 TINCRA0A1B0GVN0 87 aa10.08□□□□□ -0.8
SMIM11A-206ENST00000489469 NDUFA6P56556 154 aa10.08□□□□□ -0.8
SMIM11A-206ENST00000489469 COX6A2Q02221 97 aa10.08□□□□□ -0.8
SMIM11A-206ENST00000489469 FAM19A2Q8N3H0 131 aa10.08□□□□□ -0.8
SMIM11A-206ENST00000489469 IFI27L1Q96BM0 104 aa10.08□□□□□ -0.8
SMIM11A-206ENST00000489469 IGHV3-64A0A075B6Q5 118 aa10.07□□□□□ -0.8
SMIM11A-206ENST00000489469 A0A0J9YXV3 536 aa10.07□□□□□ -0.8
SMIM11A-206ENST00000489469 LEPROTL1O95214 131 aa10.07□□□□□ -0.8
SMIM11A-206ENST00000489469 C9orf163Q8N9P6 203 aa10.07□□□□□ -0.8
SMIM11A-206ENST00000489469 F8WDY8 70 aa10.06□□□□□ -0.8
SMIM11A-206ENST00000489469 ORAOV1Q8WV07 137 aa10.06□□□□□ -0.8
SMIM11A-206ENST00000489469 C2orf48Q96LS8 159 aa10.06□□□□□ -0.8
SMIM11A-206ENST00000489469 HSPB8Q9UJY1 196 aa10.06□□□□□ -0.8
SMIM11A-206ENST00000489469 IGLV5-45A0A087WSX0 123 aa10.05□□□□□ -0.8
SMIM11A-206ENST00000489469 TRAV12-1A0A0B4J245 112 aa10.05□□□□□ -0.8
SMIM11A-206ENST00000489469 KRTAP10-1P60331 282 aa10.05□□□□□ -0.8
SMIM11A-206ENST00000489469 SPAG11BQ08648 103 aa10.05□□□□□ -0.8
SMIM11A-206ENST00000489469 LINC00469Q8N7U9 141 aa10.05□□□□□ -0.8
SMIM11A-206ENST00000489469 PACRGQ96M98 296 aaPredicted RBP10.05□□□□□ -0.8
SMIM11A-206ENST00000489469 PKIGQ9Y2B9 76 aa10.05□□□□□ -0.8
SMIM11A-206ENST00000489469 DNAH5Q8TE73 4624 aa10.04□□□□□ -0.8
SMIM11A-206ENST00000489469 NUPR1O60356 82 aa10.04□□□□□ -0.8
SMIM11A-206ENST00000489469 IGLC3P0DOY3 106 aa10.04□□□□□ -0.8
SMIM11A-206ENST00000489469 COA6Q5JTJ3 125 aaKnown RBP10.04□□□□□ -0.8
SMIM11A-206ENST00000489469 CDKN2A-AS1Q9UH64 79 aa10.04□□□□□ -0.8
SMIM11A-206ENST00000489469 DYNC1H1Q14204 4646 aaKnown RBP10.03□□□□□ -0.8
SMIM11A-206ENST00000489469 IGLV4-69A0A075B6H9 119 aa10.03□□□□□ -0.8
SMIM11A-206ENST00000489469 H3BRM9 83 aa10.03□□□□□ -0.8
SMIM11A-206ENST00000489469 CDK2AP2O75956 126 aa10.03□□□□□ -0.8
SMIM11A-206ENST00000489469 SLPIP03973 132 aa10.03□□□□□ -0.8
SMIM11A-206ENST00000489469 SYCNQ0VAF6 134 aa10.03□□□□□ -0.8
SMIM11A-206ENST00000489469 CARD19Q96LW7 228 aa10.03□□□□□ -0.8
SMIM11A-206ENST00000489469 CAMK2N2Q96S95 79 aa10.03□□□□□ -0.8
SMIM11A-206ENST00000489469 CHAC1Q9BUX1 264 aa10.03□□□□□ -0.8
SMIM11A-206ENST00000489469 BIRC6Q9NR09 4857 aa10.02□□□□□ -0.8
SMIM11A-206ENST00000489469 CHTOPQ9Y3Y2 248 aaKnown RBP10.02□□□□□ -0.81
SMIM11A-206ENST00000489469 LINC00526Q96FQ7 95 aa10.01□□□□□ -0.81
SMIM11A-206ENST00000489469 F8VRH5 84 aa10□□□□□ -0.81
SMIM11A-206ENST00000489469 NDUFA1O15239 70 aa10□□□□□ -0.81
SMIM11A-206ENST00000489469 PRSS2P07478 247 aa10□□□□□ -0.81
SMIM11A-206ENST00000489469 FABP4P15090 132 aa10□□□□□ -0.81
SMIM11A-206ENST00000489469 LINC01620Q4KN68 170 aa10□□□□□ -0.81
SMIM11A-206ENST00000489469 Q8IZM0 81 aa10□□□□□ -0.81
SMIM11A-206ENST00000489469 LRP1BQ9NZR2 4599 aa9.99□□□□□ -0.81
SMIM11A-206ENST00000489469 RNF151Q2KHN1 245 aa9.99□□□□□ -0.81
SMIM11A-206ENST00000489469 SDIM1Q6ZPB5 146 aa9.99□□□□□ -0.81
SMIM11A-206ENST00000489469 Q6ZSA8 131 aa9.99□□□□□ -0.81
SMIM11A-206ENST00000489469 SMIM1B2RUZ4 78 aa9.98□□□□□ -0.81
SMIM11A-206ENST00000489469 ZNF22P17026 224 aaPredicted RBP9.98□□□□□ -0.81
SMIM11A-206ENST00000489469 KIAA0087Q14695 138 aa9.98□□□□□ -0.81
SMIM11A-206ENST00000489469 MAP1LC3CQ9BXW4 147 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms