RNA–Protein interactions for RNA: ENST00000489430.1

MRPL55-230, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-230ENST00000489430 OR10D4PQ8NGN7 298 aa12.04□□□□□ -0.48
MRPL55-230ENST00000489430 NXT2Q9NPJ8 142 aaKnown RBP12.04□□□□□ -0.48
MRPL55-230ENST00000489430 IGLV4-69A0A075B6H9 119 aa12.03□□□□□ -0.48
MRPL55-230ENST00000489430 LOC389332A0A1B0GUA5 103 aa12.03□□□□□ -0.48
MRPL55-230ENST00000489430 IFITM10A6NMD0 228 aa12.03□□□□□ -0.48
MRPL55-230ENST00000489430 G0S2P27469 103 aa12.03□□□□□ -0.48
MRPL55-230ENST00000489430 MAJINQ3KP22 176 aa12.03□□□□□ -0.48
MRPL55-230ENST00000489430 C5orf38Q86SI9 138 aa12.03□□□□□ -0.48
MRPL55-230ENST00000489430 LINC00526Q96FQ7 95 aa12.03□□□□□ -0.48
MRPL55-230ENST00000489430 CYSLTR1Q9Y271 337 aa12.03□□□□□ -0.48
MRPL55-230ENST00000489430 IGKV2-24A0A0C4DH68 120 aa12.02□□□□□ -0.49
MRPL55-230ENST00000489430 J3QL48 77 aa12.02□□□□□ -0.49
MRPL55-230ENST00000489430 S100PP25815 95 aa12.02□□□□□ -0.49
MRPL55-230ENST00000489430 COMMD7Q86VX2 200 aa12.02□□□□□ -0.49
MRPL55-230ENST00000489430 TMEM141Q96I45 108 aa12.02□□□□□ -0.49
MRPL55-230ENST00000489430 OPRPNQ99935 248 aaPredicted RBP12.02□□□□□ -0.49
MRPL55-230ENST00000489430 IGLV4-3A0A075B6K6 122 aa12.01□□□□□ -0.49
MRPL55-230ENST00000489430 A0A096LNI7 61 aa12.01□□□□□ -0.49
MRPL55-230ENST00000489430 OXTP01178 125 aa12.01□□□□□ -0.49
MRPL55-230ENST00000489430 COX19Q49B96 90 aa12.01□□□□□ -0.49
MRPL55-230ENST00000489430 C10orf91Q5T1B1 145 aa12.01□□□□□ -0.49
MRPL55-230ENST00000489430 C7orf33Q8WU49 177 aa12.01□□□□□ -0.49
MRPL55-230ENST00000489430 CAMK2N2Q96S95 79 aa12.01□□□□□ -0.49
MRPL55-230ENST00000489430 RNF151Q2KHN1 245 aa12□□□□□ -0.49
MRPL55-230ENST00000489430 C2orf66Q6UXQ4 117 aa12□□□□□ -0.49
MRPL55-230ENST00000489430 STPG4Q8N801 248 aa12□□□□□ -0.49
MRPL55-230ENST00000489430 GNB1LQ9BYB4 327 aa12□□□□□ -0.49
MRPL55-230ENST00000489430 TGIF2-C20orf24A0A0A6YYL0 155 aa11.99□□□□□ -0.49
MRPL55-230ENST00000489430 LOC107984640A0A0U1RRK4 108 aa11.99□□□□□ -0.49
MRPL55-230ENST00000489430 SPAG11BQ08648 103 aa11.99□□□□□ -0.49
MRPL55-230ENST00000489430 RHEBQ15382 184 aa11.99□□□□□ -0.49
MRPL55-230ENST00000489430 Q6ZN92 141 aa11.99□□□□□ -0.49
MRPL55-230ENST00000489430 TEX43Q6ZNM6 134 aa11.99□□□□□ -0.49
MRPL55-230ENST00000489430 Q6ZRU5 148 aa11.99□□□□□ -0.49
MRPL55-230ENST00000489430 CARHSP1Q9Y2V2 147 aaKnown RBP11.99□□□□□ -0.49
MRPL55-230ENST00000489430 C2orf88Q9BSF0 95 aa11.98□□□□□ -0.49
MRPL55-230ENST00000489430 A0A087WZ39 114 aa11.97□□□□□ -0.49
MRPL55-230ENST00000489430 PTTG1IPP53801 180 aa11.97□□□□□ -0.49
MRPL55-230ENST00000489430 PAPPA-AS1Q5QFB9 102 aa11.97□□□□□ -0.49
MRPL55-230ENST00000489430 LINC00242Q5T6M2 205 aa11.97□□□□□ -0.49
MRPL55-230ENST00000489430 MRPL35Q9NZE8 188 aaKnown RBP11.97□□□□□ -0.49
MRPL55-230ENST00000489430 IGIPA6NJ69 53 aa11.96□□□□□ -0.49
MRPL55-230ENST00000489430 LINC01561Q8N1V8 128 aa11.96□□□□□ -0.49
MRPL55-230ENST00000489430 ORAOV1Q8WV07 137 aa11.96□□□□□ -0.49
MRPL55-230ENST00000489430 AMELXQ99217 191 aa11.96□□□□□ -0.49
MRPL55-230ENST00000489430 VCX2Q9H322 139 aa11.96□□□□□ -0.49
MRPL55-230ENST00000489430 LINC01549A6NIU2 74 aa11.95□□□□□ -0.5
MRPL55-230ENST00000489430 MT-ND6P03923 174 aa11.95□□□□□ -0.5
MRPL55-230ENST00000489430 UBE2D1P51668 147 aa11.95□□□□□ -0.5
MRPL55-230ENST00000489430 FAM19A3Q7Z5A8 133 aa11.94□□□□□ -0.5
MRPL55-230ENST00000489430 TIMM17AQ99595 171 aa11.94□□□□□ -0.5
MRPL55-230ENST00000489430 NDUFA1O15239 70 aa11.93□□□□□ -0.5
MRPL55-230ENST00000489430 KIAA1644Q3SXP7 199 aa11.93□□□□□ -0.5
MRPL55-230ENST00000489430 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.92□□□□□ -0.5
MRPL55-230ENST00000489430 HNRNPA3P51991 378 aaKnown RBP11.92□□□□□ -0.5
MRPL55-230ENST00000489430 SEC11AP67812 179 aa11.92□□□□□ -0.5
MRPL55-230ENST00000489430 TOMM6Q96B49 74 aa11.92□□□□□ -0.5
MRPL55-230ENST00000489430 LRP1Q07954 4544 aaKnown RBP11.91□□□□□ -0.5
MRPL55-230ENST00000489430 LINC01546A6NGU7 62 aa11.91□□□□□ -0.5
MRPL55-230ENST00000489430 GAGE2BQ13066 116 aa11.91□□□□□ -0.5
MRPL55-230ENST00000489430 LINC00173Q6ZV60 143 aa11.91□□□□□ -0.5
MRPL55-230ENST00000489430 ALKBH7Q9BT30 221 aaPredicted RBP11.91□□□□□ -0.5
MRPL55-230ENST00000489430 RPS10P5Q9NQ39 176 aa11.91□□□□□ -0.5
MRPL55-230ENST00000489430 TLX1NBP0CAT3 122 aa11.9□□□□□ -0.5
MRPL55-230ENST00000489430 ERASQ7Z444 233 aa11.9□□□□□ -0.5
MRPL55-230ENST00000489430 PKHD1L1Q86WI1 4243 aa11.9□□□□□ -0.5
MRPL55-230ENST00000489430 KIAA0087Q14695 138 aa11.89□□□□□ -0.51
MRPL55-230ENST00000489430 FAT3Q8TDW7 4589 aa11.88□□□□□ -0.51
MRPL55-230ENST00000489430 HERVK_113P63121 156 aa11.88□□□□□ -0.51
MRPL55-230ENST00000489430 PRR3P79522 188 aaKnown RBP11.88□□□□□ -0.51
MRPL55-230ENST00000489430 TRBV30A0A0K0K1B3 111 aa11.87□□□□□ -0.51
MRPL55-230ENST00000489430 RPL18AQ02543 176 aaKnown RBP11.87□□□□□ -0.51
MRPL55-230ENST00000489430 MRPL18Q9H0U6 180 aaKnown RBP11.87□□□□□ -0.51
MRPL55-230ENST00000489430 FABP9Q0Z7S8 132 aa11.86□□□□□ -0.51
MRPL55-230ENST00000489430 NDUFA5Q16718 116 aa11.86□□□□□ -0.51
MRPL55-230ENST00000489430 UNQ6190/PRO20217Q6UXQ8 127 aa11.86□□□□□ -0.51
MRPL55-230ENST00000489430 A0A0J9YXV3 536 aa11.85□□□□□ -0.51
MRPL55-230ENST00000489430 SNAPINO95295 136 aa11.85□□□□□ -0.51
MRPL55-230ENST00000489430 C9orf116Q5BN46 136 aaPredicted RBP11.85□□□□□ -0.51
MRPL55-230ENST00000489430 C10orf25Q5T742 122 aa11.85□□□□□ -0.51
MRPL55-230ENST00000489430 Q6ZRP5 223 aa11.85□□□□□ -0.51
MRPL55-230ENST00000489430 SVBPQ8N300 66 aa11.85□□□□□ -0.51
MRPL55-230ENST00000489430 SCGB3A1Q96QR1 104 aa11.85□□□□□ -0.51
MRPL55-230ENST00000489430 C6orf48Q9UBA6 75 aa11.85□□□□□ -0.51
MRPL55-230ENST00000489430 A0A1W2PNN7 141 aa11.84□□□□□ -0.51
MRPL55-230ENST00000489430 ZC2HC1BQ5TFG8 222 aa11.84□□□□□ -0.51
MRPL55-230ENST00000489430 APOC3P02656 99 aa11.83□□□□□ -0.52
MRPL55-230ENST00000489430 FA2HQ7L5A8 372 aa11.83□□□□□ -0.52
MRPL55-230ENST00000489430 Q8IZM0 81 aa11.83□□□□□ -0.52
MRPL55-230ENST00000489430 GEMIN7Q9H840 131 aaKnown RBP11.83□□□□□ -0.52
MRPL55-230ENST00000489430 SMCO4Q9NRQ5 59 aa11.83□□□□□ -0.52
MRPL55-230ENST00000489430 PRSS2P07478 247 aa11.82□□□□□ -0.52
MRPL55-230ENST00000489430 SERTAD4-AS1Q5TG53 156 aa11.82□□□□□ -0.52
MRPL55-230ENST00000489430 PACRGQ96M98 296 aaPredicted RBP11.82□□□□□ -0.52
MRPL55-230ENST00000489430 CDKN2A-AS1Q9UH64 79 aa11.81□□□□□ -0.52
MRPL55-230ENST00000489430 NDUFC2-KCTD14E9PQ53 114 aa11.8□□□□□ -0.52
MRPL55-230ENST00000489430 C6orf226Q5I0X4 101 aa11.8□□□□□ -0.52
MRPL55-230ENST00000489430 SPINK6Q6UWN8 80 aa11.8□□□□□ -0.52
MRPL55-230ENST00000489430 TRAPPC1Q9Y5R8 145 aa11.8□□□□□ -0.52
MRPL55-230ENST00000489430 TINCRA0A1B0GVN0 87 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms