RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 COX8AP10176 69 aa4.82□□□□□ -1.64
EXOSC3-206ENST00000489414 RHOHQ15669 191 aa4.82□□□□□ -1.64
EXOSC3-206ENST00000489414 BATFQ16520 125 aa4.82□□□□□ -1.64
EXOSC3-206ENST00000489414 COL5A1-AS1Q5SY13 56 aa4.82□□□□□ -1.64
EXOSC3-206ENST00000489414 C2orf66Q6UXQ4 117 aa4.82□□□□□ -1.64
EXOSC3-206ENST00000489414 ERASQ7Z444 233 aa4.82□□□□□ -1.64
EXOSC3-206ENST00000489414 SNHG12Q9BXW3 62 aa4.82□□□□□ -1.64
EXOSC3-206ENST00000489414 JPT2Q9H910 190 aa4.82□□□□□ -1.64
EXOSC3-206ENST00000489414 IGHV3OR16-12A0A075B7B8 117 aa4.81□□□□□ -1.64
EXOSC3-206ENST00000489414 A0A087WX48 190 aa4.81□□□□□ -1.64
EXOSC3-206ENST00000489414 TRAV12-1A0A0B4J245 112 aa4.81□□□□□ -1.64
EXOSC3-206ENST00000489414 TRBV27A0A0K0K1C4 114 aa4.81□□□□□ -1.64
EXOSC3-206ENST00000489414 M0QY20 66 aa4.81□□□□□ -1.64
EXOSC3-206ENST00000489414 PSCAO43653 123 aa4.81□□□□□ -1.64
EXOSC3-206ENST00000489414 ATP5G1P05496 136 aa4.81□□□□□ -1.64
EXOSC3-206ENST00000489414 POLR2KP53803 58 aaKnown RBP4.81□□□□□ -1.64
EXOSC3-206ENST00000489414 TMEM97Q5BJF2 176 aa4.81□□□□□ -1.64
EXOSC3-206ENST00000489414 PAPPA-AS1Q5QFB9 102 aa4.81□□□□□ -1.64
EXOSC3-206ENST00000489414 TMEM141Q96I45 108 aa4.81□□□□□ -1.64
EXOSC3-206ENST00000489414 CHTOPQ9Y3Y2 248 aaKnown RBP4.81□□□□□ -1.64
EXOSC3-206ENST00000489414 MUC12Q9UKN1 5478 aa4.8□□□□□ -1.64
EXOSC3-206ENST00000489414 F8VRH5 84 aa4.8□□□□□ -1.64
EXOSC3-206ENST00000489414 I3L3M4 83 aa4.8□□□□□ -1.64
EXOSC3-206ENST00000489414 CFC1BP0CG36 223 aa4.8□□□□□ -1.64
EXOSC3-206ENST00000489414 NMUP48645 174 aa4.8□□□□□ -1.64
EXOSC3-206ENST00000489414 PRR4Q16378 134 aa4.8□□□□□ -1.64
EXOSC3-206ENST00000489414 ZFP2Q6ZN57 461 aa4.8□□□□□ -1.64
EXOSC3-206ENST00000489414 TMEM263Q8WUH6 116 aaKnown RBP4.8□□□□□ -1.64
EXOSC3-206ENST00000489414 C16orf74Q96GX8 76 aa4.8□□□□□ -1.64
EXOSC3-206ENST00000489414 DNAJC30Q96LL9 226 aa4.8□□□□□ -1.64
EXOSC3-206ENST00000489414 TRAV26-1A0A087WT03 109 aa4.79□□□□□ -1.64
EXOSC3-206ENST00000489414 LYRM9A8MSI8 78 aa4.79□□□□□ -1.64
EXOSC3-206ENST00000489414 DLEU1O43261 78 aa4.79□□□□□ -1.64
EXOSC3-206ENST00000489414 DEFB130BP0DP73 79 aa4.79□□□□□ -1.64
EXOSC3-206ENST00000489414 DEFB130AP0DP74 79 aa4.79□□□□□ -1.64
EXOSC3-206ENST00000489414 AZU1P20160 251 aa4.79□□□□□ -1.64
EXOSC3-206ENST00000489414 HINT1P49773 126 aaPredicted RBP4.79□□□□□ -1.64
EXOSC3-206ENST00000489414 HERVK_113P61574 105 aa4.79□□□□□ -1.64
EXOSC3-206ENST00000489414 C11orf72Q8NBR9 251 aa4.79□□□□□ -1.64
EXOSC3-206ENST00000489414 OR4C5Q8NGB2 326 aa4.79□□□□□ -1.64
EXOSC3-206ENST00000489414 TIMM17AQ99595 171 aa4.79□□□□□ -1.64
EXOSC3-206ENST00000489414 MRPL16Q9NX20 251 aaKnown RBP4.79□□□□□ -1.64
EXOSC3-206ENST00000489414 MRPL35Q9NZE8 188 aaKnown RBP4.79□□□□□ -1.64
EXOSC3-206ENST00000489414 TRGV1A0A0A0MS02 117 aa4.78□□□□□ -1.64
EXOSC3-206ENST00000489414 IGHV3-73A0A0B4J1V6 119 aa4.78□□□□□ -1.64
EXOSC3-206ENST00000489414 A0A1B0GV90 55 aa4.78□□□□□ -1.64
EXOSC3-206ENST00000489414 K7EP13 123 aa4.78□□□□□ -1.64
EXOSC3-206ENST00000489414 CIDEAO60543 219 aa4.78□□□□□ -1.64
EXOSC3-206ENST00000489414 IGHV3-53P01767 116 aa4.78□□□□□ -1.64
EXOSC3-206ENST00000489414 SMAGPQ0VAQ4 97 aa4.78□□□□□ -1.64
EXOSC3-206ENST00000489414 WFDC2Q14508 124 aa4.78□□□□□ -1.64
EXOSC3-206ENST00000489414 PMVKQ15126 192 aa4.78□□□□□ -1.64
EXOSC3-206ENST00000489414 RRN3P1Q2M238 152 aa4.78□□□□□ -1.64
EXOSC3-206ENST00000489414 ANKRD39Q53RE8 183 aa4.78□□□□□ -1.64
EXOSC3-206ENST00000489414 ZC2HC1BQ5TFG8 222 aa4.78□□□□□ -1.64
EXOSC3-206ENST00000489414 CFAP126Q5VTH2 177 aa4.78□□□□□ -1.64
EXOSC3-206ENST00000489414 NEGR1Q7Z3B1 354 aa4.78□□□□□ -1.64
EXOSC3-206ENST00000489414 C1orf158Q8N1D5 194 aa4.78□□□□□ -1.64
EXOSC3-206ENST00000489414 STPG4Q8N801 248 aa4.78□□□□□ -1.64
EXOSC3-206ENST00000489414 NEXN-AS1Q8NBZ9 246 aa4.78□□□□□ -1.64
EXOSC3-206ENST00000489414 BAALCQ8WXS3 180 aa4.78□□□□□ -1.64
EXOSC3-206ENST00000489414 TRAV4A0A0B4J268 109 aa4.77□□□□□ -1.65
EXOSC3-206ENST00000489414 TSHBP01222 138 aa4.77□□□□□ -1.65
EXOSC3-206ENST00000489414 NPSP0C0P6 89 aa4.77□□□□□ -1.65
EXOSC3-206ENST00000489414 COTL1Q14019 142 aa4.77□□□□□ -1.65
EXOSC3-206ENST00000489414 BOD1L2Q8IYS8 172 aa4.77□□□□□ -1.65
EXOSC3-206ENST00000489414 RNASE8Q8TDE3 154 aaKnown RBP4.77□□□□□ -1.65
EXOSC3-206ENST00000489414 GPR98Q8WXG9 6306 aa4.77□□□□□ -1.65
EXOSC3-206ENST00000489414 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.76□□□□□ -1.65
EXOSC3-206ENST00000489414 TRGV2A0A075B6R0 118 aa4.76□□□□□ -1.65
EXOSC3-206ENST00000489414 A0A0J9YY99 117 aa4.76□□□□□ -1.65
EXOSC3-206ENST00000489414 TRBV10-1A0A0K0K1A3 114 aa4.76□□□□□ -1.65
EXOSC3-206ENST00000489414 A6NDN8 102 aa4.76□□□□□ -1.65
EXOSC3-206ENST00000489414 IGIPA6NJ69 53 aa4.76□□□□□ -1.65
EXOSC3-206ENST00000489414 H3BNG1 76 aa4.76□□□□□ -1.65
EXOSC3-206ENST00000489414 SEC11AP67812 179 aa4.76□□□□□ -1.65
EXOSC3-206ENST00000489414 RPL36AP83881 106 aaKnown RBP4.76□□□□□ -1.65
EXOSC3-206ENST00000489414 HSD52Q0P140 79 aa4.76□□□□□ -1.65
EXOSC3-206ENST00000489414 DAZ2Q13117 558 aaKnown RBP4.76□□□□□ -1.65
EXOSC3-206ENST00000489414 MPV17L2Q567V2 206 aa4.76□□□□□ -1.65
EXOSC3-206ENST00000489414 UFSP1Q6NVU6 142 aa4.76□□□□□ -1.65
EXOSC3-206ENST00000489414 C20orf203Q8NBC4 194 aa4.76□□□□□ -1.65
EXOSC3-206ENST00000489414 RPL36ALQ969Q0 106 aaKnown RBP4.76□□□□□ -1.65
EXOSC3-206ENST00000489414 VCX2Q9H322 139 aa4.76□□□□□ -1.65
EXOSC3-206ENST00000489414 SPANXA1Q9NS26 97 aa4.76□□□□□ -1.65
EXOSC3-206ENST00000489414 HHLA3Q9XRX5 114 aa4.76□□□□□ -1.65
EXOSC3-206ENST00000489414 K7EQD1 137 aa4.75□□□□□ -1.65
EXOSC3-206ENST00000489414 PRM2P04554 102 aa4.75□□□□□ -1.65
EXOSC3-206ENST00000489414 FGF6P10767 208 aa4.75□□□□□ -1.65
EXOSC3-206ENST00000489414 CRYBA4P53673 196 aa4.75□□□□□ -1.65
EXOSC3-206ENST00000489414 KRTAP10-6P60371 365 aaPredicted RBP4.75□□□□□ -1.65
EXOSC3-206ENST00000489414 RPL39P62891 51 aaKnown RBP4.75□□□□□ -1.65
EXOSC3-206ENST00000489414 BVES-AS1Q5T3Y7 98 aa4.75□□□□□ -1.65
EXOSC3-206ENST00000489414 CST9LQ9H4G1 147 aa4.75□□□□□ -1.65
EXOSC3-206ENST00000489414 NOP10Q9NPE3 64 aaKnown RBP4.75□□□□□ -1.65
EXOSC3-206ENST00000489414 HIGD1BQ9P298 99 aa4.75□□□□□ -1.65
EXOSC3-206ENST00000489414 PYGO1Q9Y3Y4 419 aa4.75□□□□□ -1.65
EXOSC3-206ENST00000489414 TRBV7-3A0A075B6L6 115 aa4.74□□□□□ -1.65
EXOSC3-206ENST00000489414 TRAV8-6A0A0B4J262 113 aa4.74□□□□□ -1.65
EXOSC3-206ENST00000489414 TRGV4A0A0C4DH28 118 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms