RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 CLLU1Q5K131 121 aa8.79□□□□□ -1
VTI1A-206ENST00000489142 ADCYAP1P18509 176 aa8.78□□□□□ -1
VTI1A-206ENST00000489142 LOC107984640A0A0U1RRK4 108 aa8.77□□□□□ -1.01
VTI1A-206ENST00000489142 APOMO95445 188 aa8.77□□□□□ -1.01
VTI1A-206ENST00000489142 PTTG1IPP53801 180 aa8.77□□□□□ -1.01
VTI1A-206ENST00000489142 PRR3P79522 188 aaKnown RBP8.77□□□□□ -1.01
VTI1A-206ENST00000489142 MRPS36P82909 103 aaKnown RBP8.77□□□□□ -1.01
VTI1A-206ENST00000489142 IFITM2Q01629 132 aa8.77□□□□□ -1.01
VTI1A-206ENST00000489142 ORAOV1Q8WV07 137 aa8.77□□□□□ -1.01
VTI1A-206ENST00000489142 MAP1LC3AQ9H492 121 aa8.77□□□□□ -1.01
VTI1A-206ENST00000489142 LINC00474Q9P2X8 69 aa8.77□□□□□ -1.01
VTI1A-206ENST00000489142 IGLV4-3A0A075B6K6 122 aa8.76□□□□□ -1.01
VTI1A-206ENST00000489142 IFI27P40305 119 aaPredicted RBP8.76□□□□□ -1.01
VTI1A-206ENST00000489142 RPL18AQ02543 176 aaKnown RBP8.76□□□□□ -1.01
VTI1A-206ENST00000489142 ZC2HC1BQ5TFG8 222 aa8.76□□□□□ -1.01
VTI1A-206ENST00000489142 IGHV3OR16-9A0A0B4J2B5 98 aa8.75□□□□□ -1.01
VTI1A-206ENST00000489142 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.75□□□□□ -1.01
VTI1A-206ENST00000489142 C2orf48Q96LS8 159 aa8.75□□□□□ -1.01
VTI1A-206ENST00000489142 PKIGQ9Y2B9 76 aa8.75□□□□□ -1.01
VTI1A-206ENST00000489142 A0A1W2PNN7 141 aa8.74□□□□□ -1.01
VTI1A-206ENST00000489142 MT1HL1P0DM35 61 aa8.74□□□□□ -1.01
VTI1A-206ENST00000489142 C10orf25Q5T742 122 aa8.74□□□□□ -1.01
VTI1A-206ENST00000489142 Q8N8P6 123 aa8.74□□□□□ -1.01
VTI1A-206ENST00000489142 OR10D4PQ8NGN7 298 aa8.74□□□□□ -1.01
VTI1A-206ENST00000489142 LAMTOR2Q9Y2Q5 125 aa8.74□□□□□ -1.01
VTI1A-206ENST00000489142 PRSS47A8MTI9 375 aa8.73□□□□□ -1.01
VTI1A-206ENST00000489142 KIAA1644Q3SXP7 199 aa8.73□□□□□ -1.01
VTI1A-206ENST00000489142 LINC00242Q5T6M2 205 aa8.73□□□□□ -1.01
VTI1A-206ENST00000489142 TMEM141Q96I45 108 aa8.73□□□□□ -1.01
VTI1A-206ENST00000489142 CTDSP1Q9GZU7 261 aa8.73□□□□□ -1.01
VTI1A-206ENST00000489142 PYGO1Q9Y3Y4 419 aa8.73□□□□□ -1.01
VTI1A-206ENST00000489142 TGIF2-C20orf24A0A0A6YYL0 155 aa8.72□□□□□ -1.01
VTI1A-206ENST00000489142 TMEM218A2RU14 115 aa8.72□□□□□ -1.01
VTI1A-206ENST00000489142 C2orf66Q6UXQ4 117 aa8.72□□□□□ -1.01
VTI1A-206ENST00000489142 UNQ6190/PRO20217Q6UXQ8 127 aa8.71□□□□□ -1.02
VTI1A-206ENST00000489142 TEX43Q6ZNM6 134 aa8.71□□□□□ -1.02
VTI1A-206ENST00000489142 LINC00173Q6ZV60 143 aa8.71□□□□□ -1.02
VTI1A-206ENST00000489142 CYSLTR1Q9Y271 337 aa8.71□□□□□ -1.02
VTI1A-206ENST00000489142 NDUFA1O15239 70 aa8.7□□□□□ -1.02
VTI1A-206ENST00000489142 UBE2D1P51668 147 aa8.7□□□□□ -1.02
VTI1A-206ENST00000489142 C9orf116Q5BN46 136 aaPredicted RBP8.7□□□□□ -1.02
VTI1A-206ENST00000489142 SERTAD4-AS1Q5TG53 156 aa8.7□□□□□ -1.02
VTI1A-206ENST00000489142 UQCC3Q6UW78 93 aa8.7□□□□□ -1.02
VTI1A-206ENST00000489142 C6orf48Q9UBA6 75 aa8.7□□□□□ -1.02
VTI1A-206ENST00000489142 A0A087WZ39 114 aa8.69□□□□□ -1.02
VTI1A-206ENST00000489142 ORMDL2Q53FV1 153 aa8.69□□□□□ -1.02
VTI1A-206ENST00000489142 COMMD7Q86VX2 200 aa8.69□□□□□ -1.02
VTI1A-206ENST00000489142 IMMP2LQ96T52 175 aa8.69□□□□□ -1.02
VTI1A-206ENST00000489142 MRPL35Q9NZE8 188 aaKnown RBP8.69□□□□□ -1.02
VTI1A-206ENST00000489142 FAM168BA1KXE4 195 aa8.68□□□□□ -1.02
VTI1A-206ENST00000489142 KIAA0087Q14695 138 aa8.68□□□□□ -1.02
VTI1A-206ENST00000489142 ODF1Q14990 250 aa8.68□□□□□ -1.02
VTI1A-206ENST00000489142 RNF151Q2KHN1 245 aa8.68□□□□□ -1.02
VTI1A-206ENST00000489142 C2orf82Q6UX34 121 aa8.68□□□□□ -1.02
VTI1A-206ENST00000489142 Q6ZN92 141 aa8.68□□□□□ -1.02
VTI1A-206ENST00000489142 Q6ZRP5 223 aa8.68□□□□□ -1.02
VTI1A-206ENST00000489142 PHF5AQ7RTV0 110 aaKnown RBP8.68□□□□□ -1.02
VTI1A-206ENST00000489142 C2orf88Q9BSF0 95 aa8.68□□□□□ -1.02
VTI1A-206ENST00000489142 NXT2Q9NPJ8 142 aaKnown RBP8.68□□□□□ -1.02
VTI1A-206ENST00000489142 IGIPA6NJ69 53 aa8.67□□□□□ -1.02
VTI1A-206ENST00000489142 GAGE2EQ4V326 116 aa8.67□□□□□ -1.02
VTI1A-206ENST00000489142 AMELXQ99217 191 aa8.67□□□□□ -1.02
VTI1A-206ENST00000489142 VCX2Q9H322 139 aa8.67□□□□□ -1.02
VTI1A-206ENST00000489142 GAGE2DQ9UEU5 116 aa8.67□□□□□ -1.02
VTI1A-206ENST00000489142 PLA2G2DQ9UNK4 145 aa8.67□□□□□ -1.02
VTI1A-206ENST00000489142 SEC11CQ9BY50 192 aa8.66□□□□□ -1.02
VTI1A-206ENST00000489142 F8WDY8 70 aa8.65□□□□□ -1.02
VTI1A-206ENST00000489142 FAM19A5Q7Z5A7 132 aaPredicted RBP8.65□□□□□ -1.02
VTI1A-206ENST00000489142 TOMM7Q9P0U1 55 aa8.65□□□□□ -1.02
VTI1A-206ENST00000489142 PSORS1C2Q9UIG4 136 aa8.65□□□□□ -1.02
VTI1A-206ENST00000489142 TRAV9-1A0A075B6T8 112 aa8.64□□□□□ -1.03
VTI1A-206ENST00000489142 MT-ND6P03923 174 aa8.64□□□□□ -1.03
VTI1A-206ENST00000489142 S100PP25815 95 aa8.64□□□□□ -1.03
VTI1A-206ENST00000489142 SPINK6Q6UWN8 80 aa8.64□□□□□ -1.03
VTI1A-206ENST00000489142 HMCN2Q8NDA2 5059 aa8.64□□□□□ -1.03
VTI1A-206ENST00000489142 K7EMI3 77 aa8.63□□□□□ -1.03
VTI1A-206ENST00000489142 TLX1NBP0CAT3 122 aa8.63□□□□□ -1.03
VTI1A-206ENST00000489142 SRSF9Q13242 221 aaKnown RBP eCLIP8.63□□□□□ -1.03
VTI1A-206ENST00000489142 TOMM6Q96B49 74 aa8.63□□□□□ -1.03
VTI1A-206ENST00000489142 LINC01600Q96MT4 127 aa8.63□□□□□ -1.03
VTI1A-206ENST00000489142 C1orf137Q5JT78 98 aa8.62□□□□□ -1.03
VTI1A-206ENST00000489142 KRTAP11-1Q8IUC1 163 aa8.62□□□□□ -1.03
VTI1A-206ENST00000489142 ALKBH7Q9BT30 221 aaPredicted RBP8.62□□□□□ -1.03
VTI1A-206ENST00000489142 GNB1LQ9BYB4 327 aa8.62□□□□□ -1.03
VTI1A-206ENST00000489142 RPS10P5Q9NQ39 176 aa8.62□□□□□ -1.03
VTI1A-206ENST00000489142 CDKN2A-AS1Q9UH64 79 aa8.62□□□□□ -1.03
VTI1A-206ENST00000489142 TNXBP22105 4242 aa8.62□□□□□ -1.03
VTI1A-206ENST00000489142 TRBV30A0A0K0K1B3 111 aa8.61□□□□□ -1.03
VTI1A-206ENST00000489142 PRSS2P07478 247 aa8.61□□□□□ -1.03
VTI1A-206ENST00000489142 NPSP0C0P6 89 aa8.61□□□□□ -1.03
VTI1A-206ENST00000489142 KRTAP7-1Q8IUC3 87 aa8.61□□□□□ -1.03
VTI1A-206ENST00000489142 PACRGQ96M98 296 aaPredicted RBP8.61□□□□□ -1.03
VTI1A-206ENST00000489142 SCGB3A1Q96QR1 104 aa8.61□□□□□ -1.03
VTI1A-206ENST00000489142 TIMM17AQ99595 171 aa8.61□□□□□ -1.03
VTI1A-206ENST00000489142 MRPL18Q9H0U6 180 aaKnown RBP8.61□□□□□ -1.03
VTI1A-206ENST00000489142 FABP9Q0Z7S8 132 aa8.6□□□□□ -1.03
VTI1A-206ENST00000489142 C10orf91Q5T1B1 145 aa8.6□□□□□ -1.03
VTI1A-206ENST00000489142 REG3GQ6UW15 175 aa8.6□□□□□ -1.03
VTI1A-206ENST00000489142 FAM19A3Q7Z5A8 133 aa8.6□□□□□ -1.03
VTI1A-206ENST00000489142 LINC01561Q8N1V8 128 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms