RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 RAB14P61106 215 aa14.37□□□□□ -0.11
COL9A3-213ENST00000489045 GAGE2BQ13066 116 aa14.37□□□□□ -0.11
COL9A3-213ENST00000489045 IFITM10A6NMD0 228 aa14.36□□□□□ -0.11
COL9A3-213ENST00000489045 RAB5AP20339 215 aa14.35□□□□□ -0.11
COL9A3-213ENST00000489045 OR10D4PQ8NGN7 298 aa14.35□□□□□ -0.11
COL9A3-213ENST00000489045 ANAPC16Q96DE5 110 aa14.35□□□□□ -0.11
COL9A3-213ENST00000489045 IGHV3OR16-9A0A0B4J2B5 98 aa14.34□□□□□ -0.11
COL9A3-213ENST00000489045 MT-ND4LP03901 98 aa14.34□□□□□ -0.11
COL9A3-213ENST00000489045 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.33□□□□□ -0.12
COL9A3-213ENST00000489045 IFI27P40305 119 aaPredicted RBP14.33□□□□□ -0.12
COL9A3-213ENST00000489045 ORAOV1Q8WV07 137 aa14.33□□□□□ -0.12
COL9A3-213ENST00000489045 PLA2G2DQ9UNK4 145 aa14.33□□□□□ -0.12
COL9A3-213ENST00000489045 A0A0J9YXV3 536 aa14.31□□□□□ -0.12
COL9A3-213ENST00000489045 LOC389332A0A1B0GUA5 103 aa14.31□□□□□ -0.12
COL9A3-213ENST00000489045 PRSS47A8MTI9 375 aa14.31□□□□□ -0.12
COL9A3-213ENST00000489045 RPL18AQ02543 176 aaKnown RBP14.31□□□□□ -0.12
COL9A3-213ENST00000489045 MAP1LC3AQ9H492 121 aa14.31□□□□□ -0.12
COL9A3-213ENST00000489045 LAMTOR2Q9Y2Q5 125 aa14.31□□□□□ -0.12
COL9A3-213ENST00000489045 PYGO1Q9Y3Y4 419 aa14.31□□□□□ -0.12
COL9A3-213ENST00000489045 IGLV4-3A0A075B6K6 122 aa14.3□□□□□ -0.12
COL9A3-213ENST00000489045 A0A1W2PNN7 141 aa14.3□□□□□ -0.12
COL9A3-213ENST00000489045 RNF151Q2KHN1 245 aa14.29□□□□□ -0.12
COL9A3-213ENST00000489045 TGIF2-C20orf24A0A0A6YYL0 155 aa14.28□□□□□ -0.12
COL9A3-213ENST00000489045 Q6ZRP5 223 aa14.28□□□□□ -0.12
COL9A3-213ENST00000489045 MRPL35Q9NZE8 188 aaKnown RBP14.28□□□□□ -0.12
COL9A3-213ENST00000489045 C9orf116Q5BN46 136 aaPredicted RBP14.27□□□□□ -0.13
COL9A3-213ENST00000489045 CLLU1Q5K131 121 aa14.27□□□□□ -0.13
COL9A3-213ENST00000489045 Q8N8P6 123 aa14.27□□□□□ -0.13
COL9A3-213ENST00000489045 TMEM141Q96I45 108 aa14.27□□□□□ -0.13
COL9A3-213ENST00000489045 F8WDY8 70 aa14.26□□□□□ -0.13
COL9A3-213ENST00000489045 NDUFA1O15239 70 aa14.26□□□□□ -0.13
COL9A3-213ENST00000489045 LINC00242Q5T6M2 205 aa14.25□□□□□ -0.13
COL9A3-213ENST00000489045 SPINK6Q6UWN8 80 aa14.25□□□□□ -0.13
COL9A3-213ENST00000489045 C10orf25Q5T742 122 aa14.24□□□□□ -0.13
COL9A3-213ENST00000489045 C2orf66Q6UXQ4 117 aa14.24□□□□□ -0.13
COL9A3-213ENST00000489045 LINC01600Q96MT4 127 aa14.24□□□□□ -0.13
COL9A3-213ENST00000489045 CYSLTR1Q9Y271 337 aa14.24□□□□□ -0.13
COL9A3-213ENST00000489045 A0A087WZ39 114 aa14.23□□□□□ -0.13
COL9A3-213ENST00000489045 UNQ6190/PRO20217Q6UXQ8 127 aa14.23□□□□□ -0.13
COL9A3-213ENST00000489045 TEX43Q6ZNM6 134 aa14.23□□□□□ -0.13
COL9A3-213ENST00000489045 IMMP2LQ96T52 175 aa14.23□□□□□ -0.13
COL9A3-213ENST00000489045 TNXBP22105 4242 aa14.22□□□□□ -0.13
COL9A3-213ENST00000489045 C6orf48Q9UBA6 75 aa14.22□□□□□ -0.13
COL9A3-213ENST00000489045 ADCYAP1P18509 176 aa14.21□□□□□ -0.13
COL9A3-213ENST00000489045 UBE2D1P51668 147 aa14.21□□□□□ -0.13
COL9A3-213ENST00000489045 SRSF9Q13242 221 aaKnown RBP eCLIP14.21□□□□□ -0.132e-8■■□□□ 12.3
COL9A3-213ENST00000489045 ORMDL2Q53FV1 153 aa14.21□□□□□ -0.13
COL9A3-213ENST00000489045 C2orf88Q9BSF0 95 aa14.21□□□□□ -0.13
COL9A3-213ENST00000489045 CTDSP1Q9GZU7 261 aa14.21□□□□□ -0.13
COL9A3-213ENST00000489045 KIAA0087Q14695 138 aa14.2□□□□□ -0.14
COL9A3-213ENST00000489045 ZC2HC1BQ5TFG8 222 aa14.2□□□□□ -0.14
COL9A3-213ENST00000489045 LINC00173Q6ZV60 143 aa14.2□□□□□ -0.14
COL9A3-213ENST00000489045 PHF5AQ7RTV0 110 aaKnown RBP14.2□□□□□ -0.14
COL9A3-213ENST00000489045 TLX1NBP0CAT3 122 aa14.19□□□□□ -0.14
COL9A3-213ENST00000489045 REG3GQ6UW15 175 aa14.19□□□□□ -0.14
COL9A3-213ENST00000489045 Q6ZN92 141 aa14.19□□□□□ -0.14
COL9A3-213ENST00000489045 K7EMI3 77 aa14.18□□□□□ -0.14
COL9A3-213ENST00000489045 AMELXQ99217 191 aa14.18□□□□□ -0.14
COL9A3-213ENST00000489045 NXT2Q9NPJ8 142 aaKnown RBP14.18□□□□□ -0.14
COL9A3-213ENST00000489045 PSORS1C2Q9UIG4 136 aa14.18□□□□□ -0.14
COL9A3-213ENST00000489045 MT-ND6P03923 174 aa14.17□□□□□ -0.14
COL9A3-213ENST00000489045 UQCC3Q6UW78 93 aa14.17□□□□□ -0.14
COL9A3-213ENST00000489045 VCX2Q9H322 139 aa14.17□□□□□ -0.14
COL9A3-213ENST00000489045 FAM168BA1KXE4 195 aa14.16□□□□□ -0.14
COL9A3-213ENST00000489045 IFITM2Q01629 132 aa14.16□□□□□ -0.14
COL9A3-213ENST00000489045 TMEM218A2RU14 115 aa14.15□□□□□ -0.14
COL9A3-213ENST00000489045 IGIPA6NJ69 53 aa14.15□□□□□ -0.14
COL9A3-213ENST00000489045 NPSP0C0P6 89 aa14.15□□□□□ -0.14
COL9A3-213ENST00000489045 KIAA1644Q3SXP7 199 aa14.15□□□□□ -0.14
COL9A3-213ENST00000489045 GAGE2EQ4V326 116 aa14.15□□□□□ -0.14
COL9A3-213ENST00000489045 C2orf82Q6UX34 121 aa14.15□□□□□ -0.14
COL9A3-213ENST00000489045 LINC01561Q8N1V8 128 aa14.15□□□□□ -0.14
COL9A3-213ENST00000489045 GAGE2DQ9UEU5 116 aa14.15□□□□□ -0.14
COL9A3-213ENST00000489045 UBR4Q5T4S7 5183 aa14.13□□□□□ -0.15
COL9A3-213ENST00000489045 TRBV30A0A0K0K1B3 111 aa14.13□□□□□ -0.15
COL9A3-213ENST00000489045 C1orf137Q5JT78 98 aa14.13□□□□□ -0.15
COL9A3-213ENST00000489045 TRAV9-1A0A075B6T8 112 aa14.12□□□□□ -0.15
COL9A3-213ENST00000489045 ODF1Q14990 250 aa14.12□□□□□ -0.15
COL9A3-213ENST00000489045 FAM19A5Q7Z5A7 132 aaPredicted RBP14.12□□□□□ -0.15
COL9A3-213ENST00000489045 FAM19A3Q7Z5A8 133 aa14.11□□□□□ -0.15
COL9A3-213ENST00000489045 PACRGQ96M98 296 aaPredicted RBP14.11□□□□□ -0.15
COL9A3-213ENST00000489045 KRTAP10-8P60410 259 aa14.1□□□□□ -0.15
COL9A3-213ENST00000489045 PRSS2P07478 247 aa14.09□□□□□ -0.15
COL9A3-213ENST00000489045 G0S2P27469 103 aa14.09□□□□□ -0.15
COL9A3-213ENST00000489045 PAPPA-AS1Q5QFB9 102 aa14.09□□□□□ -0.15
COL9A3-213ENST00000489045 TOMM6Q96B49 74 aa14.09□□□□□ -0.15
COL9A3-213ENST00000489045 TIMM17AQ99595 171 aa14.09□□□□□ -0.15
COL9A3-213ENST00000489045 SEC11CQ9BY50 192 aa14.09□□□□□ -0.15
COL9A3-213ENST00000489045 TOMM7Q9P0U1 55 aa14.09□□□□□ -0.15
COL9A3-213ENST00000489045 NDUFC2-KCTD14E9PQ53 114 aa14.08□□□□□ -0.16
COL9A3-213ENST00000489045 KRTAP11-1Q8IUC1 163 aa14.08□□□□□ -0.16
COL9A3-213ENST00000489045 S100PP25815 95 aa14.07□□□□□ -0.16
COL9A3-213ENST00000489045 HERVK_113P63121 156 aa14.07□□□□□ -0.16
COL9A3-213ENST00000489045 KRTAP7-1Q8IUC3 87 aa14.07□□□□□ -0.16
COL9A3-213ENST00000489045 CKS1BP61024 79 aa14.06□□□□□ -0.16
COL9A3-213ENST00000489045 SEC11AP67812 179 aa14.06□□□□□ -0.16
COL9A3-213ENST00000489045 M0QXV9 152 aa14.05□□□□□ -0.16
COL9A3-213ENST00000489045 C6orf226Q5I0X4 101 aa14.05□□□□□ -0.16
COL9A3-213ENST00000489045 C9orf129Q5T035 196 aaKnown RBP14.05□□□□□ -0.16
COL9A3-213ENST00000489045 Q8IZM0 81 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms