RNA–Protein interactions for RNA: ENST00000488934.1

SF3A3-207, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 5

Gene SF3A3, Length 273 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-207ENST00000488934 G0S2P27469 103 aa3.33□□□□□ -1.88
SF3A3-207ENST00000488934 FUSP35637 526 aaKnown RBP eCLIP3.33□□□□□ -1.88
SF3A3-207ENST00000488934 KRTAP10-1P60331 282 aa3.33□□□□□ -1.88
SF3A3-207ENST00000488934 WFDC2Q14508 124 aa3.33□□□□□ -1.88
SF3A3-207ENST00000488934 NDUFA5Q16718 116 aa3.33□□□□□ -1.88
SF3A3-207ENST00000488934 COX19Q49B96 90 aa3.33□□□□□ -1.88
SF3A3-207ENST00000488934 Q6ZSA8 131 aa3.33□□□□□ -1.88
SF3A3-207ENST00000488934 COMMD7Q86VX2 200 aa3.33□□□□□ -1.88
SF3A3-207ENST00000488934 ZNF664Q8N3J9 261 aa3.33□□□□□ -1.88
SF3A3-207ENST00000488934 TIMM21Q9BVV7 248 aa3.33□□□□□ -1.88
SF3A3-207ENST00000488934 MAP1LC3AQ9H492 121 aa3.33□□□□□ -1.88
SF3A3-207ENST00000488934 CDC42SE2Q9NRR3 84 aa3.33□□□□□ -1.88
SF3A3-207ENST00000488934 SPANXA1Q9NS26 97 aa3.33□□□□□ -1.88
SF3A3-207ENST00000488934 LINC00959A0A1B0GUT2 108 aa3.32□□□□□ -1.88
SF3A3-207ENST00000488934 C1orf196B1AJZ1 125 aa3.32□□□□□ -1.88
SF3A3-207ENST00000488934 SMKR1H3BMG3 65 aa3.32□□□□□ -1.88
SF3A3-207ENST00000488934 PRSS1P07477 247 aa3.32□□□□□ -1.88
SF3A3-207ENST00000488934 IFI27P40305 119 aaPredicted RBP3.32□□□□□ -1.88
SF3A3-207ENST00000488934 XGP55808 180 aa3.32□□□□□ -1.88
SF3A3-207ENST00000488934 CNBPP62633 177 aaKnown RBP3.32□□□□□ -1.88
SF3A3-207ENST00000488934 IFITM2Q01629 132 aa3.32□□□□□ -1.88
SF3A3-207ENST00000488934 RHEBQ15382 184 aa3.32□□□□□ -1.88
SF3A3-207ENST00000488934 PAPPA-AS1Q5QFB9 102 aa3.32□□□□□ -1.88
SF3A3-207ENST00000488934 KRTAP26-1Q6PEX3 210 aa3.32□□□□□ -1.88
SF3A3-207ENST00000488934 TMEM136Q6ZRR5 245 aa3.32□□□□□ -1.88
SF3A3-207ENST00000488934 DEFB104AQ8WTQ1 72 aa3.32□□□□□ -1.88
SF3A3-207ENST00000488934 CHCHD10Q8WYQ3 142 aaPredicted RBP3.32□□□□□ -1.88
SF3A3-207ENST00000488934 PRELID3AQ96N28 172 aa3.32□□□□□ -1.88
SF3A3-207ENST00000488934 UBE2D4Q9Y2X8 147 aa3.32□□□□□ -1.88
SF3A3-207ENST00000488934 DNAH11Q96DT5 4516 aa3.32□□□□□ -1.88
SF3A3-207ENST00000488934 IGHV3-64A0A075B6Q5 118 aa3.31□□□□□ -1.88
SF3A3-207ENST00000488934 IGHV1-58A0A0C4DH39 117 aa3.31□□□□□ -1.88
SF3A3-207ENST00000488934 LINC01549A6NIU2 74 aa3.31□□□□□ -1.88
SF3A3-207ENST00000488934 APOMO95445 188 aa3.31□□□□□ -1.88
SF3A3-207ENST00000488934 NPYP01303 97 aa3.31□□□□□ -1.88
SF3A3-207ENST00000488934 MT-ND6P03923 174 aa3.31□□□□□ -1.88
SF3A3-207ENST00000488934 ADCYAP1P18509 176 aa3.31□□□□□ -1.88
SF3A3-207ENST00000488934 XCL1P47992 114 aa3.31□□□□□ -1.88
SF3A3-207ENST00000488934 ORMDL2Q53FV1 153 aa3.31□□□□□ -1.88
SF3A3-207ENST00000488934 CD164L2Q6UWJ8 174 aa3.31□□□□□ -1.88
SF3A3-207ENST00000488934 Q6ZN92 141 aa3.31□□□□□ -1.88
SF3A3-207ENST00000488934 C9orf163Q8N9P6 203 aa3.31□□□□□ -1.88
SF3A3-207ENST00000488934 NXT2Q9NPJ8 142 aaKnown RBP3.31□□□□□ -1.88
SF3A3-207ENST00000488934 CARHSP1Q9Y2V2 147 aaKnown RBP3.31□□□□□ -1.88
SF3A3-207ENST00000488934 GVQW2A0A096LPI5 108 aaPredicted RBP3.3□□□□□ -1.88
SF3A3-207ENST00000488934 MRPS36P82909 103 aaKnown RBP3.3□□□□□ -1.88
SF3A3-207ENST00000488934 C10orf91Q5T1B1 145 aa3.3□□□□□ -1.88
SF3A3-207ENST00000488934 Q5VSD8 79 aa3.3□□□□□ -1.88
SF3A3-207ENST00000488934 KRTAP5-11Q6L8G4 156 aa3.3□□□□□ -1.88
SF3A3-207ENST00000488934 SVBPQ8N300 66 aa3.3□□□□□ -1.88
SF3A3-207ENST00000488934 C2orf88Q9BSF0 95 aa3.3□□□□□ -1.88
SF3A3-207ENST00000488934 CHAC1Q9BUX1 264 aa3.3□□□□□ -1.88
SF3A3-207ENST00000488934 GNB1LQ9BYB4 327 aa3.3□□□□□ -1.88
SF3A3-207ENST00000488934 LINC00474Q9P2X8 69 aa3.3□□□□□ -1.88
SF3A3-207ENST00000488934 CYSLTR1Q9Y271 337 aa3.3□□□□□ -1.88
SF3A3-207ENST00000488934 PYGO1Q9Y3Y4 419 aa3.3□□□□□ -1.88
SF3A3-207ENST00000488934 DYNC1H1Q14204 4646 aaKnown RBP3.29□□□□□ -1.88
SF3A3-207ENST00000488934 TGIF2-C20orf24A0A0A6YYL0 155 aa3.29□□□□□ -1.88
SF3A3-207ENST00000488934 TRAV13-1A0A0B4J241 112 aa3.29□□□□□ -1.88
SF3A3-207ENST00000488934 F8WDY8 70 aa3.29□□□□□ -1.88
SF3A3-207ENST00000488934 COX7A2LO14548 114 aa3.29□□□□□ -1.88
SF3A3-207ENST00000488934 SNAPINO95295 136 aa3.29□□□□□ -1.88
SF3A3-207ENST00000488934 TEX43Q6ZNM6 134 aa3.29□□□□□ -1.88
SF3A3-207ENST00000488934 Q6ZUT4 128 aa3.29□□□□□ -1.88
SF3A3-207ENST00000488934 SCXQ7RTU7 201 aa3.29□□□□□ -1.88
SF3A3-207ENST00000488934 Q8N8P6 123 aa3.29□□□□□ -1.88
SF3A3-207ENST00000488934 C15orf56Q8N910 161 aa3.29□□□□□ -1.88
SF3A3-207ENST00000488934 TMEM141Q96I45 108 aa3.29□□□□□ -1.88
SF3A3-207ENST00000488934 RPS10P5Q9NQ39 176 aa3.29□□□□□ -1.88
SF3A3-207ENST00000488934 ABCA13Q86UQ4 5058 aa3.28□□□□□ -1.88
SF3A3-207ENST00000488934 LRP1BQ9NZR2 4599 aa3.28□□□□□ -1.88
SF3A3-207ENST00000488934 LOC389332A0A1B0GUA5 103 aa3.28□□□□□ -1.88
SF3A3-207ENST00000488934 SMR3BP02814 79 aaPredicted RBP3.28□□□□□ -1.88
SF3A3-207ENST00000488934 RPL39P62891 51 aaKnown RBP3.28□□□□□ -1.88
SF3A3-207ENST00000488934 SEC11AP67812 179 aa3.28□□□□□ -1.88
SF3A3-207ENST00000488934 LINC01620Q4KN68 170 aa3.28□□□□□ -1.88
SF3A3-207ENST00000488934 HIGD2BQ4VC39 106 aa3.28□□□□□ -1.88
SF3A3-207ENST00000488934 C2orf66Q6UXQ4 117 aa3.28□□□□□ -1.88
SF3A3-207ENST00000488934 SDIM1Q6ZPB5 146 aa3.28□□□□□ -1.88
SF3A3-207ENST00000488934 OR10D4PQ8NGN7 298 aa3.28□□□□□ -1.88
SF3A3-207ENST00000488934 CARD19Q96LW7 228 aa3.28□□□□□ -1.88
SF3A3-207ENST00000488934 HSPG2P98160 4391 aa3.28□□□□□ -1.89
SF3A3-207ENST00000488934 DNAH5Q8TE73 4624 aa3.28□□□□□ -1.89
SF3A3-207ENST00000488934 IGLV4-69A0A075B6H9 119 aa3.27□□□□□ -1.89
SF3A3-207ENST00000488934 IGLV4-3A0A075B6K6 122 aa3.27□□□□□ -1.89
SF3A3-207ENST00000488934 APOC3P02656 99 aa3.27□□□□□ -1.89
SF3A3-207ENST00000488934 INAFM2P0DMQ5 153 aa3.27□□□□□ -1.89
SF3A3-207ENST00000488934 HAMPP81172 84 aa3.27□□□□□ -1.89
SF3A3-207ENST00000488934 SYCNQ0VAF6 134 aa3.27□□□□□ -1.89
SF3A3-207ENST00000488934 CIRBPQ14011 172 aaKnown RBP3.27□□□□□ -1.89
SF3A3-207ENST00000488934 RNASE13Q5GAN3 156 aaKnown RBP3.27□□□□□ -1.89
SF3A3-207ENST00000488934 CIRBP-AS1Q8TBR5 109 aa3.27□□□□□ -1.89
SF3A3-207ENST00000488934 DPH3Q96FX2 82 aa3.27□□□□□ -1.89
SF3A3-207ENST00000488934 C2orf48Q96LS8 159 aa3.27□□□□□ -1.89
SF3A3-207ENST00000488934 CAMK2N2Q96S95 79 aa3.27□□□□□ -1.89
SF3A3-207ENST00000488934 TIMM17AQ99595 171 aa3.27□□□□□ -1.89
SF3A3-207ENST00000488934 VCX2Q9H322 139 aa3.27□□□□□ -1.89
SF3A3-207ENST00000488934 SMCO4Q9NRQ5 59 aa3.27□□□□□ -1.89
SF3A3-207ENST00000488934 IGHV3OR16-9A0A0B4J2B5 98 aa3.26□□□□□ -1.89
SF3A3-207ENST00000488934 LOC107984640A0A0U1RRK4 108 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms