RNA–Protein interactions for RNA: ENST00000488912.5

COL21A1-211, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 2,327 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-211ENST00000488912 PRSS29PA6NIE9 313 aa7.62□□□□□ -1.19
COL21A1-211ENST00000488912 IGIPA6NJ69 53 aa7.62□□□□□ -1.19
COL21A1-211ENST00000488912 PPDPFLQ8WWR9 84 aa7.62□□□□□ -1.19
COL21A1-211ENST00000488912 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.61□□□□□ -1.19
COL21A1-211ENST00000488912 A0A096LPF7 62 aa7.61□□□□□ -1.19
COL21A1-211ENST00000488912 IGKV2-29A2NJV5 120 aaPredicted RBP7.61□□□□□ -1.19
COL21A1-211ENST00000488912 STAB2Q8WWQ8 2551 aa7.61□□□□□ -1.19
COL21A1-211ENST00000488912 LINC01549A6NIU2 74 aa7.61□□□□□ -1.19
COL21A1-211ENST00000488912 PRSS1P07477 247 aa7.61□□□□□ -1.19
COL21A1-211ENST00000488912 CARD19Q96LW7 228 aa7.61□□□□□ -1.19
COL21A1-211ENST00000488912 TMEM262E9PQX1 116 aa7.6□□□□□ -1.19
COL21A1-211ENST00000488912 TIMM17AQ99595 171 aa7.6□□□□□ -1.19
COL21A1-211ENST00000488912 CEMP1Q6PRD7 247 aaPredicted RBP7.6□□□□□ -1.19
COL21A1-211ENST00000488912 Q6Q795 121 aa7.6□□□□□ -1.19
COL21A1-211ENST00000488912 BAALCQ8WXS3 180 aa7.6□□□□□ -1.19
COL21A1-211ENST00000488912 OPRPNQ99935 248 aaPredicted RBP7.6□□□□□ -1.19
COL21A1-211ENST00000488912 UBE2D4Q9Y2X8 147 aa7.59□□□□□ -1.19
COL21A1-211ENST00000488912 DEFB131BA0A096LNP1 70 aa7.58□□□□□ -1.2
COL21A1-211ENST00000488912 TRBV6-8A0A0A6YYG3 113 aa7.58□□□□□ -1.2
COL21A1-211ENST00000488912 NDUFV3P56181 108 aaKnown RBP7.58□□□□□ -1.2
COL21A1-211ENST00000488912 TEN1Q86WV5 123 aa7.58□□□□□ -1.2
COL21A1-211ENST00000488912 TMEM141Q96I45 108 aa7.58□□□□□ -1.2
COL21A1-211ENST00000488912 IGKCP01834 107 aa7.58□□□□□ -1.2
COL21A1-211ENST00000488912 MRPL23Q16540 153 aaKnown RBP7.58□□□□□ -1.2
COL21A1-211ENST00000488912 ZC2HC1BQ5TFG8 222 aa7.58□□□□□ -1.2
COL21A1-211ENST00000488912 FAM104AQ969W3 186 aa7.58□□□□□ -1.2
COL21A1-211ENST00000488912 TMEM243Q9BU79 118 aa7.58□□□□□ -1.2
COL21A1-211ENST00000488912 ICOSQ9Y6W8 199 aa7.58□□□□□ -1.2
COL21A1-211ENST00000488912 IGLV4-3A0A075B6K6 122 aa7.57□□□□□ -1.2
COL21A1-211ENST00000488912 CCDC179H3BU77 68 aa7.57□□□□□ -1.2
COL21A1-211ENST00000488912 MAPKAPK5-AS1Q8N8E1 139 aa7.57□□□□□ -1.2
COL21A1-211ENST00000488912 PYGO1Q9Y3Y4 419 aa7.57□□□□□ -1.2
COL21A1-211ENST00000488912 TRAV12-1A0A0B4J245 112 aa7.56□□□□□ -1.2
COL21A1-211ENST00000488912 H3BNG1 76 aa7.56□□□□□ -1.2
COL21A1-211ENST00000488912 UBE2L6O14933 153 aa7.56□□□□□ -1.2
COL21A1-211ENST00000488912 RNASE13Q5GAN3 156 aaKnown RBP7.56□□□□□ -1.2
COL21A1-211ENST00000488912 MRPL35Q9NZE8 188 aaKnown RBP7.56□□□□□ -1.2
COL21A1-211ENST00000488912 TRAV10A0A0B4J240 114 aa7.55□□□□□ -1.2
COL21A1-211ENST00000488912 DPM2O94777 84 aa7.55□□□□□ -1.2
COL21A1-211ENST00000488912 PMVKQ15126 192 aa7.55□□□□□ -1.2
COL21A1-211ENST00000488912 CHCHD5Q9BSY4 110 aa7.55□□□□□ -1.2
COL21A1-211ENST00000488912 M0QXV9 152 aa7.55□□□□□ -1.2
COL21A1-211ENST00000488912 GAGE2BQ13066 116 aa7.55□□□□□ -1.2
COL21A1-211ENST00000488912 GAGE2EQ4V326 116 aa7.55□□□□□ -1.2
COL21A1-211ENST00000488912 TIMM21Q9BVV7 248 aa7.55□□□□□ -1.2
COL21A1-211ENST00000488912 GAGE2DQ9UEU5 116 aa7.55□□□□□ -1.2
COL21A1-211ENST00000488912 F8VRH5 84 aa7.54□□□□□ -1.2
COL21A1-211ENST00000488912 IFITM1P13164 125 aa7.54□□□□□ -1.2
COL21A1-211ENST00000488912 DGAT2L7PQ6IED9 249 aa7.54□□□□□ -1.2
COL21A1-211ENST00000488912 TMEM126AQ9H061 195 aa7.54□□□□□ -1.2
COL21A1-211ENST00000488912 H7C423 109 aa7.53□□□□□ -1.2
COL21A1-211ENST00000488912 PAPPA-AS1Q5QFB9 102 aa7.53□□□□□ -1.2
COL21A1-211ENST00000488912 AMELXQ99217 191 aa7.53□□□□□ -1.2
COL21A1-211ENST00000488912 CSDC2Q9Y534 153 aaKnown RBP7.53□□□□□ -1.2
COL21A1-211ENST00000488912 MRPS36P82909 103 aaKnown RBP7.53□□□□□ -1.2
COL21A1-211ENST00000488912 IGLV4-69A0A075B6H9 119 aa7.52□□□□□ -1.2
COL21A1-211ENST00000488912 HIST1H4GQ99525 98 aa7.52□□□□□ -1.2
COL21A1-211ENST00000488912 PLNP26678 52 aa7.52□□□□□ -1.21
COL21A1-211ENST00000488912 C5orf47Q569G3 176 aa7.52□□□□□ -1.21
COL21A1-211ENST00000488912 TTC32Q5I0X7 151 aa7.52□□□□□ -1.21
COL21A1-211ENST00000488912 LYRM7Q5U5X0 104 aa7.52□□□□□ -1.21
COL21A1-211ENST00000488912 LYPD5Q6UWN5 251 aa7.52□□□□□ -1.21
COL21A1-211ENST00000488912 CDC42SE2Q9NRR3 84 aa7.52□□□□□ -1.21
COL21A1-211ENST00000488912 IGLV4-60A0A075B6I1 120 aa7.51□□□□□ -1.21
COL21A1-211ENST00000488912 MYMXA0A1B0GTQ4 84 aa7.51□□□□□ -1.21
COL21A1-211ENST00000488912 LELP1Q5T871 98 aa7.51□□□□□ -1.21
COL21A1-211ENST00000488912 TMEM101Q96IK0 257 aa7.51□□□□□ -1.21
COL21A1-211ENST00000488912 PPDPFQ9H3Y8 114 aa7.51□□□□□ -1.21
COL21A1-211ENST00000488912 TRBV20-1A0A075B6N2 111 aa7.5□□□□□ -1.21
COL21A1-211ENST00000488912 C11orf86A6NJI1 115 aa7.5□□□□□ -1.21
COL21A1-211ENST00000488912 SNCGO76070 127 aa7.5□□□□□ -1.21
COL21A1-211ENST00000488912 PSMB2P49721 201 aa7.5□□□□□ -1.21
COL21A1-211ENST00000488912 UBE2D1P51668 147 aa7.5□□□□□ -1.21
COL21A1-211ENST00000488912 FBN3Q75N90 2809 aa7.5□□□□□ -1.21
COL21A1-211ENST00000488912 A0A0J9YXV3 536 aa7.5□□□□□ -1.21
COL21A1-211ENST00000488912 Q8N3U1 123 aa7.5□□□□□ -1.21
COL21A1-211ENST00000488912 TIRAPP58753 221 aa7.49□□□□□ -1.21
COL21A1-211ENST00000488912 LINC01600Q96MT4 127 aa7.49□□□□□ -1.21
COL21A1-211ENST00000488912 ESRGQ1W209 222 aa7.49□□□□□ -1.21
COL21A1-211ENST00000488912 MEIG1Q5JSS6 88 aa7.49□□□□□ -1.21
COL21A1-211ENST00000488912 ANKRD29Q8N6D5 301 aa7.49□□□□□ -1.21
COL21A1-211ENST00000488912 C15orf53Q8NAA6 179 aa7.49□□□□□ -1.21
COL21A1-211ENST00000488912 A0A1B0GUV1 79 aa7.48□□□□□ -1.21
COL21A1-211ENST00000488912 TRAV13-1A0A0B4J241 112 aa7.47□□□□□ -1.21
COL21A1-211ENST00000488912 CSMD3Q7Z407 3707 aa7.47□□□□□ -1.21
COL21A1-211ENST00000488912 WFDC10BQ8IUB3 73 aa7.47□□□□□ -1.21
COL21A1-211ENST00000488912 IGKV3OR2-268A0A0C4DH90 116 aa7.46□□□□□ -1.21
COL21A1-211ENST00000488912 TCL1BO95988 128 aa7.46□□□□□ -1.21
COL21A1-211ENST00000488912 TMEM170BQ5T4T1 132 aa7.46□□□□□ -1.21
COL21A1-211ENST00000488912 TINCRA0A1B0GVN0 87 aa7.46□□□□□ -1.22
COL21A1-211ENST00000488912 ZNF22P17026 224 aaPredicted RBP7.46□□□□□ -1.22
COL21A1-211ENST00000488912 LINC00242Q5T6M2 205 aa7.46□□□□□ -1.22
COL21A1-211ENST00000488912 DNAH7Q8WXX0 4024 aa7.46□□□□□ -1.22
COL21A1-211ENST00000488912 SCGB1C2P0DMR2 95 aa7.45□□□□□ -1.22
COL21A1-211ENST00000488912 CLPSL2Q6UWE3 100 aa7.45□□□□□ -1.22
COL21A1-211ENST00000488912 DYNC2H1Q8NCM8 4307 aaKnown RBP7.45□□□□□ -1.22
COL21A1-211ENST00000488912 LOC107984156A0A0G2JMH3 177 aa7.45□□□□□ -1.22
COL21A1-211ENST00000488912 ANGP03950 147 aaKnown RBP7.45□□□□□ -1.22
COL21A1-211ENST00000488912 ARL17AQ8IVW1 177 aa7.45□□□□□ -1.22
COL21A1-211ENST00000488912 COX6A2Q02221 97 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms