RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 C11orf86A6NJI1 115 aa1.2□□□□□ -2.22
ITGB1-214ENST00000488427 NMBP08949 121 aa1.2□□□□□ -2.22
ITGB1-214ENST00000488427 COX4I1P13073 169 aa1.2□□□□□ -2.22
ITGB1-214ENST00000488427 RBM3P98179 157 aaKnown RBP1.2□□□□□ -2.22
ITGB1-214ENST00000488427 COQ5Q5HYK3 327 aa1.2□□□□□ -2.22
ITGB1-214ENST00000488427 Q5VV11 94 aa1.2□□□□□ -2.22
ITGB1-214ENST00000488427 Q6ZS49 121 aa1.2□□□□□ -2.22
ITGB1-214ENST00000488427 LHFPL1Q86WI0 220 aa1.2□□□□□ -2.22
ITGB1-214ENST00000488427 SMIM12Q96EX1 92 aa1.2□□□□□ -2.22
ITGB1-214ENST00000488427 IMUPQ9GZP8 106 aa1.2□□□□□ -2.22
ITGB1-214ENST00000488427 LPAR5Q9H1C0 372 aa1.2□□□□□ -2.22
ITGB1-214ENST00000488427 MED28Q9H204 178 aa1.2□□□□□ -2.22
ITGB1-214ENST00000488427 IGHV1-58A0A0C4DH39 117 aa1.19□□□□□ -2.22
ITGB1-214ENST00000488427 BBIP1A8MTZ0 92 aa1.19□□□□□ -2.22
ITGB1-214ENST00000488427 GABARAPH6UMI1 98 aa1.19□□□□□ -2.22
ITGB1-214ENST00000488427 BCE1O60756 84 aa1.19□□□□□ -2.22
ITGB1-214ENST00000488427 CFDP00746 253 aaPredicted RBP1.19□□□□□ -2.22
ITGB1-214ENST00000488427 S100A9P06702 114 aaKnown RBP1.19□□□□□ -2.22
ITGB1-214ENST00000488427 MT1BP07438 61 aa1.19□□□□□ -2.22
ITGB1-214ENST00000488427 RPS29P62273 56 aaKnown RBP1.19□□□□□ -2.22
ITGB1-214ENST00000488427 UBE2D2P62837 147 aa1.19□□□□□ -2.22
ITGB1-214ENST00000488427 SURF2Q15527 256 aaPredicted RBP1.19□□□□□ -2.22
ITGB1-214ENST00000488427 SCGB1D4Q6XE38 83 aa1.19□□□□□ -2.22
ITGB1-214ENST00000488427 ZNF818PQ6ZRF7 136 aa1.19□□□□□ -2.22
ITGB1-214ENST00000488427 OR2D3Q8NGH3 330 aa1.19□□□□□ -2.22
ITGB1-214ENST00000488427 TIMM21Q9BVV7 248 aa1.19□□□□□ -2.22
ITGB1-214ENST00000488427 PXMP4Q9Y6I8 212 aa1.19□□□□□ -2.22
ITGB1-214ENST00000488427 IGKV2-40A0A087WW87 121 aaPredicted RBP1.18□□□□□ -2.22
ITGB1-214ENST00000488427 UBE2L6O14933 153 aa1.18□□□□□ -2.22
ITGB1-214ENST00000488427 CST7O76096 145 aa1.18□□□□□ -2.22
ITGB1-214ENST00000488427 FAM107AO95990 144 aa1.18□□□□□ -2.22
ITGB1-214ENST00000488427 IGKV2D-40P01614 121 aaPredicted RBP1.18□□□□□ -2.22
ITGB1-214ENST00000488427 ETV1P50549 477 aa1.18□□□□□ -2.22
ITGB1-214ENST00000488427 FXYD4P59646 89 aa1.18□□□□□ -2.22
ITGB1-214ENST00000488427 TMEM78Q5T7P6 136 aa1.18□□□□□ -2.22
ITGB1-214ENST00000488427 C2orf91Q6ZV80 131 aa1.18□□□□□ -2.22
ITGB1-214ENST00000488427 ACBD7Q8N6N7 88 aa1.18□□□□□ -2.22
ITGB1-214ENST00000488427 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.18□□□□□ -2.22
ITGB1-214ENST00000488427 NUP35Q8NFH5 326 aa1.18□□□□□ -2.22
ITGB1-214ENST00000488427 BORCS5Q969J3 196 aa1.18□□□□□ -2.22
ITGB1-214ENST00000488427 TRGV9Q99603 122 aa1.18□□□□□ -2.22
ITGB1-214ENST00000488427 TMEM109Q9BVC6 243 aa1.18□□□□□ -2.22
ITGB1-214ENST00000488427 AGPAT4-IT1Q9H0P7 198 aa1.18□□□□□ -2.22
ITGB1-214ENST00000488427 COMMD3Q9UBI1 195 aa1.18□□□□□ -2.22
ITGB1-214ENST00000488427 TRBV7-3A0A075B6L6 115 aa1.17□□□□□ -2.22
ITGB1-214ENST00000488427 TRBV25-1A0A075B6N4 114 aa1.17□□□□□ -2.22
ITGB1-214ENST00000488427 IGKV3OR2-268A0A0C4DH90 116 aa1.17□□□□□ -2.22
ITGB1-214ENST00000488427 A8MWV9 139 aa1.17□□□□□ -2.22
ITGB1-214ENST00000488427 PPYP01298 95 aa1.17□□□□□ -2.22
ITGB1-214ENST00000488427 IGKV1-5P01602 117 aa1.17□□□□□ -2.22
ITGB1-214ENST00000488427 TYMSP04818 313 aa1.17□□□□□ -2.22
ITGB1-214ENST00000488427 LIMS3P0CW19 117 aa1.17□□□□□ -2.22
ITGB1-214ENST00000488427 LIMS4P0CW20 117 aa1.17□□□□□ -2.22
ITGB1-214ENST00000488427 XCL1P47992 114 aa1.17□□□□□ -2.22
ITGB1-214ENST00000488427 GTF2A1P52655 376 aaPredicted RBP1.17□□□□□ -2.22
ITGB1-214ENST00000488427 TMEM258P61165 79 aa1.17□□□□□ -2.22
ITGB1-214ENST00000488427 GNG11P61952 73 aa1.17□□□□□ -2.22
ITGB1-214ENST00000488427 LPCAT3Q6P1A2 487 aa1.17□□□□□ -2.22
ITGB1-214ENST00000488427 LYZL1Q6UWQ5 148 aa1.17□□□□□ -2.22
ITGB1-214ENST00000488427 IMMP2LQ96T52 175 aa1.17□□□□□ -2.22
ITGB1-214ENST00000488427 OR5AC2Q9NZP5 309 aa1.17□□□□□ -2.22
ITGB1-214ENST00000488427 HIGD1AQ9Y241 93 aa1.17□□□□□ -2.22
ITGB1-214ENST00000488427 TRBV10-1A0A0K0K1A3 114 aa1.16□□□□□ -2.22
ITGB1-214ENST00000488427 LOC100506127A0A0U1RQW1 187 aa1.16□□□□□ -2.22
ITGB1-214ENST00000488427 TAS2R20P59543 309 aa1.16□□□□□ -2.22
ITGB1-214ENST00000488427 S100A10P60903 97 aa1.16□□□□□ -2.22
ITGB1-214ENST00000488427 TMEM97Q5BJF2 176 aa1.16□□□□□ -2.22
ITGB1-214ENST00000488427 RPL22L1Q6P5R6 122 aaKnown RBP1.16□□□□□ -2.22
ITGB1-214ENST00000488427 S100A7AQ86SG5 101 aa1.16□□□□□ -2.22
ITGB1-214ENST00000488427 AQP10Q96PS8 301 aa1.16□□□□□ -2.22
ITGB1-214ENST00000488427 CEBPZOSA8MTT3 80 aa1.15□□□□□ -2.23
ITGB1-214ENST00000488427 M0R3E3 92 aa1.15□□□□□ -2.23
ITGB1-214ENST00000488427 HYPMO75409 117 aa1.15□□□□□ -2.23
ITGB1-214ENST00000488427 PGLYRP1O75594 196 aaPredicted RBP1.15□□□□□ -2.23
ITGB1-214ENST00000488427 OR5G3P0C626 314 aa1.15□□□□□ -2.23
ITGB1-214ENST00000488427 HIST1H1EP10412 219 aaKnown RBP1.15□□□□□ -2.23
ITGB1-214ENST00000488427 HIST1H1DP16402 221 aaKnown RBP1.15□□□□□ -2.23
ITGB1-214ENST00000488427 SPCS3P61009 180 aa1.15□□□□□ -2.23
ITGB1-214ENST00000488427 CCDC58Q4VC31 144 aa1.15□□□□□ -2.23
ITGB1-214ENST00000488427 NMSQ5H8A3 153 aa1.15□□□□□ -2.23
ITGB1-214ENST00000488427 FAM74A4Q5TZK3 123 aa1.15□□□□□ -2.23
ITGB1-214ENST00000488427 C12orf73Q69YU5 71 aa1.15□□□□□ -2.23
ITGB1-214ENST00000488427 Q6AWC8 147 aa1.15□□□□□ -2.23
ITGB1-214ENST00000488427 XAF1Q6GPH4 301 aa1.15□□□□□ -2.23
ITGB1-214ENST00000488427 ATP11AUNQ6ZP68 121 aa1.15□□□□□ -2.23
ITGB1-214ENST00000488427 BPIFA4PQ86YQ2 179 aa1.15□□□□□ -2.23
ITGB1-214ENST00000488427 EXOC3-AS1Q8N2X6 119 aa1.15□□□□□ -2.23
ITGB1-214ENST00000488427 ASB13Q8WXK3 278 aa1.15□□□□□ -2.23
ITGB1-214ENST00000488427 SMIM19Q96E16 107 aa1.15□□□□□ -2.23
ITGB1-214ENST00000488427 HOPXQ9BPY8 73 aaPredicted RBP1.15□□□□□ -2.23
ITGB1-214ENST00000488427 SIKE1Q9BRV8 207 aa1.15□□□□□ -2.23
ITGB1-214ENST00000488427 NAA60Q9H7X0 242 aa1.15□□□□□ -2.23
ITGB1-214ENST00000488427 FKBP14Q9NWM8 211 aa1.15□□□□□ -2.23
ITGB1-214ENST00000488427 ARL6IP5O75915 188 aa1.14□□□□□ -2.23
ITGB1-214ENST00000488427 PVALBP20472 110 aaPredicted RBP1.14□□□□□ -2.23
ITGB1-214ENST00000488427 CSN1S1P47710 185 aa1.14□□□□□ -2.23
ITGB1-214ENST00000488427 TAS2R30P59541 319 aa1.14□□□□□ -2.23
ITGB1-214ENST00000488427 RPS25P62851 125 aaKnown RBP1.14□□□□□ -2.23
ITGB1-214ENST00000488427 OR5A1Q8NGJ0 315 aa1.14□□□□□ -2.23
ITGB1-214ENST00000488427 DNAJC9Q8WXX5 260 aa1.14□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms