RNA–Protein interactions for RNA: ENST00000488155.1

NIPAL3-207, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 931 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-207ENST00000488155 PLAC8Q9NZF1 115 aa7.14□□□□□ -1.27
NIPAL3-207ENST00000488155 FAM104BQ5XKR9 115 aa7.13□□□□□ -1.27
NIPAL3-207ENST00000488155 MRPL52Q86TS9 123 aaKnown RBP7.13□□□□□ -1.27
NIPAL3-207ENST00000488155 TRAV13-1A0A0B4J241 112 aa7.12□□□□□ -1.27
NIPAL3-207ENST00000488155 ZNF561-AS1K7EIQ3 104 aa7.12□□□□□ -1.27
NIPAL3-207ENST00000488155 KIAA1644Q3SXP7 199 aa7.12□□□□□ -1.27
NIPAL3-207ENST00000488155 SERTAD4-AS1Q5TG53 156 aa7.12□□□□□ -1.27
NIPAL3-207ENST00000488155 CD164L2Q6UWJ8 174 aa7.12□□□□□ -1.27
NIPAL3-207ENST00000488155 C7orf33Q8WU49 177 aa7.12□□□□□ -1.27
NIPAL3-207ENST00000488155 CARD19Q96LW7 228 aa7.12□□□□□ -1.27
NIPAL3-207ENST00000488155 KIR2DL4Q99706 377 aa7.12□□□□□ -1.27
NIPAL3-207ENST00000488155 CHTOPQ9Y3Y2 248 aaKnown RBP7.12□□□□□ -1.27
NIPAL3-207ENST00000488155 PPP1R17O96001 155 aa7.11□□□□□ -1.27
NIPAL3-207ENST00000488155 MALP21145 153 aa7.11□□□□□ -1.27
NIPAL3-207ENST00000488155 CKS2P33552 79 aa7.11□□□□□ -1.27
NIPAL3-207ENST00000488155 Q6ZUT4 128 aa7.11□□□□□ -1.27
NIPAL3-207ENST00000488155 UBE2D4Q9Y2X8 147 aa7.11□□□□□ -1.27
NIPAL3-207ENST00000488155 RPL39P62891 51 aaKnown RBP7.1□□□□□ -1.27
NIPAL3-207ENST00000488155 SYCNQ0VAF6 134 aa7.1□□□□□ -1.27
NIPAL3-207ENST00000488155 C5orf38Q86SI9 138 aa7.1□□□□□ -1.27
NIPAL3-207ENST00000488155 CBY1Q9Y3M2 126 aa7.1□□□□□ -1.27
NIPAL3-207ENST00000488155 HMCN2Q8NDA2 5059 aa7.09□□□□□ -1.27
NIPAL3-207ENST00000488155 IGLV4-69A0A075B6H9 119 aa7.09□□□□□ -1.27
NIPAL3-207ENST00000488155 D6R8Y8 96 aa7.09□□□□□ -1.27
NIPAL3-207ENST00000488155 COX7A2LO14548 114 aa7.09□□□□□ -1.27
NIPAL3-207ENST00000488155 TNFRSF6BO95407 300 aa7.09□□□□□ -1.27
NIPAL3-207ENST00000488155 GAGE2BQ13066 116 aa7.09□□□□□ -1.27
NIPAL3-207ENST00000488155 Q6ZRU5 148 aa7.09□□□□□ -1.27
NIPAL3-207ENST00000488155 ORMDL3Q8N138 153 aa7.09□□□□□ -1.27
NIPAL3-207ENST00000488155 PLA2G2DQ9UNK4 145 aa7.09□□□□□ -1.27
NIPAL3-207ENST00000488155 TNXBP22105 4242 aa7.08□□□□□ -1.28
NIPAL3-207ENST00000488155 TCAPO15273 167 aa7.08□□□□□ -1.28
NIPAL3-207ENST00000488155 NPYP01303 97 aa7.08□□□□□ -1.28
NIPAL3-207ENST00000488155 PPBPP02775 128 aa7.08□□□□□ -1.28
NIPAL3-207ENST00000488155 MT1HL1P0DM35 61 aa7.08□□□□□ -1.28
NIPAL3-207ENST00000488155 NDUFA6P56556 154 aa7.08□□□□□ -1.28
NIPAL3-207ENST00000488155 SMAGPQ0VAQ4 97 aa7.08□□□□□ -1.28
NIPAL3-207ENST00000488155 TMEM18Q96B42 140 aa7.08□□□□□ -1.28
NIPAL3-207ENST00000488155 PRELID3AQ96N28 172 aa7.08□□□□□ -1.28
NIPAL3-207ENST00000488155 OPRPNQ99935 248 aaPredicted RBP7.08□□□□□ -1.28
NIPAL3-207ENST00000488155 HIST1H2BKO60814 126 aa7.07□□□□□ -1.28
NIPAL3-207ENST00000488155 HIST1H2BJP06899 126 aa7.07□□□□□ -1.28
NIPAL3-207ENST00000488155 HIST1H2BOP23527 126 aa7.07□□□□□ -1.28
NIPAL3-207ENST00000488155 HIST1H2BBP33778 126 aa7.07□□□□□ -1.28
NIPAL3-207ENST00000488155 HIST1H2BDP58876 126 aa7.07□□□□□ -1.28
NIPAL3-207ENST00000488155 HIST1H2BCP62807 126 aa7.07□□□□□ -1.28
NIPAL3-207ENST00000488155 PRR3P79522 188 aaKnown RBP7.07□□□□□ -1.28
NIPAL3-207ENST00000488155 HIST2H2BEQ16778 126 aa7.07□□□□□ -1.28
NIPAL3-207ENST00000488155 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.07□□□□□ -1.28
NIPAL3-207ENST00000488155 BAGE3Q86Y29 109 aa7.07□□□□□ -1.28
NIPAL3-207ENST00000488155 HIST1H2BHQ93079 126 aa7.07□□□□□ -1.28
NIPAL3-207ENST00000488155 CAMK2N2Q96S95 79 aa7.07□□□□□ -1.28
NIPAL3-207ENST00000488155 HIST1H2BNQ99877 126 aa7.07□□□□□ -1.28
NIPAL3-207ENST00000488155 HIST1H2BMQ99879 126 aa7.07□□□□□ -1.28
NIPAL3-207ENST00000488155 C20orf78Q9BR46 151 aa7.07□□□□□ -1.28
NIPAL3-207ENST00000488155 ALKBH7Q9BT30 221 aaPredicted RBP7.07□□□□□ -1.28
NIPAL3-207ENST00000488155 SMIM2Q9BVW6 85 aa7.07□□□□□ -1.28
NIPAL3-207ENST00000488155 CSDC2Q9Y534 153 aaKnown RBP7.07□□□□□ -1.28
NIPAL3-207ENST00000488155 A0A0J9YXV3 536 aa7.06□□□□□ -1.28
NIPAL3-207ENST00000488155 LOC107984640A0A0U1RRK4 108 aa7.05□□□□□ -1.28
NIPAL3-207ENST00000488155 LOC389332A0A1B0GUA5 103 aa7.05□□□□□ -1.28
NIPAL3-207ENST00000488155 PTTG1IPP53801 180 aa7.05□□□□□ -1.28
NIPAL3-207ENST00000488155 SPAG11BQ08648 103 aa7.05□□□□□ -1.28
NIPAL3-207ENST00000488155 ODF1Q14990 250 aa7.05□□□□□ -1.28
NIPAL3-207ENST00000488155 FAM104AQ969W3 186 aa7.05□□□□□ -1.28
NIPAL3-207ENST00000488155 TIMM21Q9BVV7 248 aa7.05□□□□□ -1.28
NIPAL3-207ENST00000488155 MAP1LC3AQ9H492 121 aa7.05□□□□□ -1.28
NIPAL3-207ENST00000488155 LINC00474Q9P2X8 69 aa7.05□□□□□ -1.28
NIPAL3-207ENST00000488155 PKIGQ9Y2B9 76 aa7.05□□□□□ -1.28
NIPAL3-207ENST00000488155 LAMTOR2Q9Y2Q5 125 aa7.05□□□□□ -1.28
NIPAL3-207ENST00000488155 UBR4Q5T4S7 5183 aa7.05□□□□□ -1.28
NIPAL3-207ENST00000488155 RPL32P62910 135 aaKnown RBP7.04□□□□□ -1.28
NIPAL3-207ENST00000488155 RPL18AQ02543 176 aaKnown RBP7.04□□□□□ -1.28
NIPAL3-207ENST00000488155 A0A1W2PNN7 141 aa7.03□□□□□ -1.28
NIPAL3-207ENST00000488155 IFITM10A6NMD0 228 aa7.03□□□□□ -1.28
NIPAL3-207ENST00000488155 APOMO95445 188 aa7.03□□□□□ -1.28
NIPAL3-207ENST00000488155 C18orf32Q8TCD1 76 aa7.03□□□□□ -1.28
NIPAL3-207ENST00000488155 ORAOV1Q8WV07 137 aa7.03□□□□□ -1.28
NIPAL3-207ENST00000488155 SPANXA1Q9NS26 97 aa7.03□□□□□ -1.28
NIPAL3-207ENST00000488155 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.02□□□□□ -1.29
NIPAL3-207ENST00000488155 SNRPEP62304 92 aaKnown RBP7.02□□□□□ -1.29
NIPAL3-207ENST00000488155 FA2HQ7L5A8 372 aa7.02□□□□□ -1.29
NIPAL3-207ENST00000488155 C2orf48Q96LS8 159 aa7.02□□□□□ -1.29
NIPAL3-207ENST00000488155 LINC00614P0C842 121 aa7.01□□□□□ -1.29
NIPAL3-207ENST00000488155 IFI27P40305 119 aaPredicted RBP7.01□□□□□ -1.29
NIPAL3-207ENST00000488155 C9orf116Q5BN46 136 aaPredicted RBP7.01□□□□□ -1.29
NIPAL3-207ENST00000488155 Q6ZRP5 223 aa7.01□□□□□ -1.29
NIPAL3-207ENST00000488155 IGHV3OR16-9A0A0B4J2B5 98 aa7□□□□□ -1.29
NIPAL3-207ENST00000488155 HSBP1O75506 76 aa7□□□□□ -1.29
NIPAL3-207ENST00000488155 SERF1AO75920 110 aa7□□□□□ -1.29
NIPAL3-207ENST00000488155 S100A2P29034 98 aa7□□□□□ -1.29
NIPAL3-207ENST00000488155 MRPS36P82909 103 aaKnown RBP7□□□□□ -1.29
NIPAL3-207ENST00000488155 COA6Q5JTJ3 125 aaKnown RBP7□□□□□ -1.29
NIPAL3-207ENST00000488155 C10orf25Q5T742 122 aa7□□□□□ -1.29
NIPAL3-207ENST00000488155 ZC2HC1BQ5TFG8 222 aa7□□□□□ -1.29
NIPAL3-207ENST00000488155 PHF5AQ7RTV0 110 aaKnown RBP7□□□□□ -1.29
NIPAL3-207ENST00000488155 Q8N8P6 123 aa7□□□□□ -1.29
NIPAL3-207ENST00000488155 NXT2Q9NPJ8 142 aaKnown RBP7□□□□□ -1.29
NIPAL3-207ENST00000488155 PDZD11Q5EBL8 140 aa6.99□□□□□ -1.29
NIPAL3-207ENST00000488155 SPINK6Q6UWN8 80 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms