RNA–Protein interactions for RNA: ENST00000488131.1

CDC42BPA-213, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-213ENST00000488131 LECT2O14960 151 aa3.34□□□□□ -1.87
CDC42BPA-213ENST00000488131 RBM3P98179 157 aaKnown RBP3.34□□□□□ -1.87
CDC42BPA-213ENST00000488131 COX6A2Q02221 97 aa3.34□□□□□ -1.87
CDC42BPA-213ENST00000488131 UNQ9165/PRO28630Q6UXU0 137 aa3.34□□□□□ -1.87
CDC42BPA-213ENST00000488131 FDCSPQ8NFU4 85 aa3.34□□□□□ -1.87
CDC42BPA-213ENST00000488131 CELSR3Q9NYQ7 3312 aa3.33□□□□□ -1.88
CDC42BPA-213ENST00000488131 A0A0U1RQV1 116 aa3.33□□□□□ -1.88
CDC42BPA-213ENST00000488131 E7EQL1 145 aa3.33□□□□□ -1.88
CDC42BPA-213ENST00000488131 NBL1P41271 181 aa3.33□□□□□ -1.88
CDC42BPA-213ENST00000488131 CXCL6P80162 114 aa3.33□□□□□ -1.88
CDC42BPA-213ENST00000488131 ADORA2A-AS1P86434 159 aa3.33□□□□□ -1.88
CDC42BPA-213ENST00000488131 PMAIP1Q13794 54 aa3.33□□□□□ -1.88
CDC42BPA-213ENST00000488131 C11orf72Q8NBR9 251 aa3.33□□□□□ -1.88
CDC42BPA-213ENST00000488131 WFDC9Q8NEX5 89 aa3.33□□□□□ -1.88
CDC42BPA-213ENST00000488131 RMI2Q96E14 147 aa3.33□□□□□ -1.88
CDC42BPA-213ENST00000488131 SND1-IT1Q9HBX3 110 aa3.33□□□□□ -1.88
CDC42BPA-213ENST00000488131 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.33□□□□□ -1.88
CDC42BPA-213ENST00000488131 LOC110117498A0A087WWA1 95 aa3.33□□□□□ -1.88
CDC42BPA-213ENST00000488131 G3V318 75 aa3.33□□□□□ -1.88
CDC42BPA-213ENST00000488131 KALRNO60229 2985 aa3.33□□□□□ -1.88
CDC42BPA-213ENST00000488131 MIFP14174 115 aa3.33□□□□□ -1.88
CDC42BPA-213ENST00000488131 IGHV3-38A0A0C4DH36 116 aa3.32□□□□□ -1.88
CDC42BPA-213ENST00000488131 A0A0U1RRA0 63 aa3.32□□□□□ -1.88
CDC42BPA-213ENST00000488131 H3BUA1 57 aa3.32□□□□□ -1.88
CDC42BPA-213ENST00000488131 TMEM256-PLSCR3K7ERE1 68 aa3.32□□□□□ -1.88
CDC42BPA-213ENST00000488131 CD164Q04900 197 aa3.32□□□□□ -1.88
CDC42BPA-213ENST00000488131 ESRGQ1W209 222 aa3.32□□□□□ -1.88
CDC42BPA-213ENST00000488131 SIRPDQ9H106 197 aa3.32□□□□□ -1.88
CDC42BPA-213ENST00000488131 SNURFQ9Y675 71 aa3.32□□□□□ -1.88
CDC42BPA-213ENST00000488131 PKDREJQ9NTG1 2253 aa3.31□□□□□ -1.88
CDC42BPA-213ENST00000488131 K7EMT4 169 aa3.31□□□□□ -1.88
CDC42BPA-213ENST00000488131 IGHV3-53P01767 116 aa3.31□□□□□ -1.88
CDC42BPA-213ENST00000488131 CCL18P55774 89 aa3.31□□□□□ -1.88
CDC42BPA-213ENST00000488131 LINC01547P58512 204 aaPredicted RBP3.31□□□□□ -1.88
CDC42BPA-213ENST00000488131 SNRPD3P62318 126 aaKnown RBP3.31□□□□□ -1.88
CDC42BPA-213ENST00000488131 RPL36AP83881 106 aaKnown RBP3.31□□□□□ -1.88
CDC42BPA-213ENST00000488131 FAM229BQ4G0N7 80 aa3.31□□□□□ -1.88
CDC42BPA-213ENST00000488131 Q6ZQT0 140 aa3.31□□□□□ -1.88
CDC42BPA-213ENST00000488131 C5orf56Q8N8D9 126 aa3.31□□□□□ -1.88
CDC42BPA-213ENST00000488131 RPL36ALQ969Q0 106 aaKnown RBP3.31□□□□□ -1.88
CDC42BPA-213ENST00000488131 RHPN1-AS1Q9BWJ2 59 aa3.31□□□□□ -1.88
CDC42BPA-213ENST00000488131 BPESC1Q9GZL8 116 aa3.31□□□□□ -1.88
CDC42BPA-213ENST00000488131 SPENQ96T58 3664 aaKnown RBP3.31□□□□□ -1.88
CDC42BPA-213ENST00000488131 PRRC2CQ9Y520 2896 aaKnown RBP3.31□□□□□ -1.88
CDC42BPA-213ENST00000488131 TRAV10A0A0B4J240 114 aa3.3□□□□□ -1.88
CDC42BPA-213ENST00000488131 TRBV6-4A0A1B0GX49 114 aa3.3□□□□□ -1.88
CDC42BPA-213ENST00000488131 LYNX1G3V0Z9 82 aa3.3□□□□□ -1.88
CDC42BPA-213ENST00000488131 LYNX1P0DP58 116 aa3.3□□□□□ -1.88
CDC42BPA-213ENST00000488131 IGFL3Q6UXB1 125 aa3.3□□□□□ -1.88
CDC42BPA-213ENST00000488131 MPLKIPQ8TAP9 179 aa3.3□□□□□ -1.88
CDC42BPA-213ENST00000488131 USMG5Q96IX5 58 aa3.3□□□□□ -1.88
CDC42BPA-213ENST00000488131 WDFY4Q6ZS81 3184 aa3.3□□□□□ -1.88
CDC42BPA-213ENST00000488131 DCHS1Q96JQ0 3298 aa3.3□□□□□ -1.88
CDC42BPA-213ENST00000488131 POLEQ07864 2286 aa3.3□□□□□ -1.88
CDC42BPA-213ENST00000488131 A8MTW9 85 aa3.3□□□□□ -1.88
CDC42BPA-213ENST00000488131 CCL21O00585 134 aa3.3□□□□□ -1.88
CDC42BPA-213ENST00000488131 C9orf66Q5T8R8 295 aa3.3□□□□□ -1.88
CDC42BPA-213ENST00000488131 Q8N814 137 aa3.3□□□□□ -1.88
CDC42BPA-213ENST00000488131 LINC01560Q8TB33 94 aa3.3□□□□□ -1.88
CDC42BPA-213ENST00000488131 TMEM254Q8TBM7 123 aa3.3□□□□□ -1.88
CDC42BPA-213ENST00000488131 ROS1P08922 2347 aa3.3□□□□□ -1.88
CDC42BPA-213ENST00000488131 SPTBN2O15020 2390 aa3.3□□□□□ -1.88
CDC42BPA-213ENST00000488131 EYSQ5T1H1 3165 aa3.3□□□□□ -1.88
CDC42BPA-213ENST00000488131 INAFM1C9JVW0 142 aa3.29□□□□□ -1.88
CDC42BPA-213ENST00000488131 K7EQD1 137 aa3.29□□□□□ -1.88
CDC42BPA-213ENST00000488131 K7EQG2 157 aa3.29□□□□□ -1.88
CDC42BPA-213ENST00000488131 PDE6GP18545 87 aa3.29□□□□□ -1.88
CDC42BPA-213ENST00000488131 SAA4P35542 130 aa3.29□□□□□ -1.88
CDC42BPA-213ENST00000488131 NREPQ16612 68 aa3.29□□□□□ -1.88
CDC42BPA-213ENST00000488131 Q1T7F1 81 aa3.29□□□□□ -1.88
CDC42BPA-213ENST00000488131 Q6ZVQ6 151 aa3.29□□□□□ -1.88
CDC42BPA-213ENST00000488131 C6orf223Q8N319 242 aa3.29□□□□□ -1.88
CDC42BPA-213ENST00000488131 COX7B2Q8TF08 81 aa3.29□□□□□ -1.88
CDC42BPA-213ENST00000488131 DYNLRB2Q8TF09 96 aa3.29□□□□□ -1.88
CDC42BPA-213ENST00000488131 Q9UF83 564 aa3.29□□□□□ -1.88
CDC42BPA-213ENST00000488131 MOB4Q9Y3A3 225 aa3.29□□□□□ -1.88
CDC42BPA-213ENST00000488131 PTPRQQ9UMZ3 2332 aa3.29□□□□□ -1.88
CDC42BPA-213ENST00000488131 A0A096LNT2 108 aa3.28□□□□□ -1.88
CDC42BPA-213ENST00000488131 NANOS2P60321 138 aaKnown RBP3.28□□□□□ -1.88
CDC42BPA-213ENST00000488131 SPINK13Q1W4C9 94 aa3.28□□□□□ -1.88
CDC42BPA-213ENST00000488131 Q6ZTC4 211 aa3.28□□□□□ -1.88
CDC42BPA-213ENST00000488131 TM2D3Q9BRN9 247 aa3.28□□□□□ -1.88
CDC42BPA-213ENST00000488131 CDC42SE2Q9NRR3 84 aa3.28□□□□□ -1.88
CDC42BPA-213ENST00000488131 DMDP11532 3685 aa3.28□□□□□ -1.88
CDC42BPA-213ENST00000488131 TECTAO75443 2155 aa3.28□□□□□ -1.88
CDC42BPA-213ENST00000488131 SMG1Q96Q15 3661 aaKnown RBP3.28□□□□□ -1.88
CDC42BPA-213ENST00000488131 ZFHX4Q86UP3 3567 aa3.28□□□□□ -1.88
CDC42BPA-213ENST00000488131 CEP250Q9BV73 2442 aa3.28□□□□□ -1.88
CDC42BPA-213ENST00000488131 IGHV3-73A0A0B4J1V6 119 aa3.28□□□□□ -1.88
CDC42BPA-213ENST00000488131 DNAJC9-AS1A6NH13 148 aa3.28□□□□□ -1.88
CDC42BPA-213ENST00000488131 IGHV4-38-2P0DP08 117 aa3.28□□□□□ -1.88
CDC42BPA-213ENST00000488131 LMO4P61968 165 aa3.28□□□□□ -1.88
CDC42BPA-213ENST00000488131 Q6ZTI0 123 aa3.28□□□□□ -1.88
CDC42BPA-213ENST00000488131 TPRP12270 2363 aaKnown RBP3.27□□□□□ -1.89
CDC42BPA-213ENST00000488131 IGHV4-28A0A0C4DH34 117 aa3.27□□□□□ -1.89
CDC42BPA-213ENST00000488131 hDV103S1A0JD37 113 aa3.27□□□□□ -1.89
CDC42BPA-213ENST00000488131 H3BQ85 93 aa3.27□□□□□ -1.89
CDC42BPA-213ENST00000488131 FUSP35637 526 aaKnown RBP eCLIP3.27□□□□□ -1.89
CDC42BPA-213ENST00000488131 DOPEY2Q9Y3R5 2298 aa3.27□□□□□ -1.89
CDC42BPA-213ENST00000488131 MGAQ8IWI9 3026 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms