RNA–Protein interactions for RNA: ENST00000487563.1

PLOD3-215, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 712 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-215ENST00000487563 RAB5AP20339 215 aa14.69□□□□□ -0.06
PLOD3-215ENST00000487563 MRPS36P82909 103 aaKnown RBP14.69□□□□□ -0.06
PLOD3-215ENST00000487563 ORAOV1Q8WV07 137 aa14.69□□□□□ -0.06
PLOD3-215ENST00000487563 OPRPNQ99935 248 aaPredicted RBP14.69□□□□□ -0.06
PLOD3-215ENST00000487563 PRELID3AQ96N28 172 aa14.68□□□□□ -0.06
PLOD3-215ENST00000487563 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.67□□□□□ -0.06
PLOD3-215ENST00000487563 SPINK6Q6UWN8 80 aa14.67□□□□□ -0.06
PLOD3-215ENST00000487563 TMEM136Q6ZRR5 245 aa14.67□□□□□ -0.06
PLOD3-215ENST00000487563 IFI27P40305 119 aaPredicted RBP14.66□□□□□ -0.06
PLOD3-215ENST00000487563 A0A0J9YXV3 536 aa14.65□□□□□ -0.06
PLOD3-215ENST00000487563 REG3GQ6UW15 175 aa14.65□□□□□ -0.06
PLOD3-215ENST00000487563 FAM104AQ969W3 186 aa14.65□□□□□ -0.06
PLOD3-215ENST00000487563 LINC01600Q96MT4 127 aa14.65□□□□□ -0.06
PLOD3-215ENST00000487563 TGIF2-C20orf24A0A0A6YYL0 155 aa14.64□□□□□ -0.07
PLOD3-215ENST00000487563 IGHV3OR16-9A0A0B4J2B5 98 aa14.64□□□□□ -0.07
PLOD3-215ENST00000487563 A0A1W2PNN7 141 aa14.64□□□□□ -0.07
PLOD3-215ENST00000487563 RNF151Q2KHN1 245 aa14.64□□□□□ -0.07
PLOD3-215ENST00000487563 C9orf116Q5BN46 136 aaPredicted RBP14.64□□□□□ -0.07
PLOD3-215ENST00000487563 NDUFA1O15239 70 aa14.63□□□□□ -0.07
PLOD3-215ENST00000487563 F8WDY8 70 aa14.62□□□□□ -0.07
PLOD3-215ENST00000487563 PNRC1Q12796 327 aaPredicted RBP14.62□□□□□ -0.07
PLOD3-215ENST00000487563 MAP1LC3AQ9H492 121 aa14.62□□□□□ -0.07
PLOD3-215ENST00000487563 MRPL35Q9NZE8 188 aaKnown RBP14.62□□□□□ -0.07
PLOD3-215ENST00000487563 LOC389332A0A1B0GUA5 103 aa14.61□□□□□ -0.07
PLOD3-215ENST00000487563 MT-ND4LP03901 98 aa14.61□□□□□ -0.07
PLOD3-215ENST00000487563 RAB14P61106 215 aa14.61□□□□□ -0.07
PLOD3-215ENST00000487563 IMMP2LQ96T52 175 aa14.61□□□□□ -0.07
PLOD3-215ENST00000487563 ANAPC16Q96DE5 110 aa14.6□□□□□ -0.07
PLOD3-215ENST00000487563 LAMTOR2Q9Y2Q5 125 aa14.6□□□□□ -0.07
PLOD3-215ENST00000487563 TNXBP22105 4242 aa14.59□□□□□ -0.07
PLOD3-215ENST00000487563 MT-ND6P03923 174 aa14.59□□□□□ -0.07
PLOD3-215ENST00000487563 PYGO1Q9Y3Y4 419 aa14.59□□□□□ -0.07
PLOD3-215ENST00000487563 IGLV4-3A0A075B6K6 122 aa14.58□□□□□ -0.08
PLOD3-215ENST00000487563 SRSF9Q13242 221 aaKnown RBP eCLIP14.58□□□□□ -0.08
PLOD3-215ENST00000487563 TMEM141Q96I45 108 aa14.58□□□□□ -0.08
PLOD3-215ENST00000487563 PHF5AQ7RTV0 110 aaKnown RBP14.57□□□□□ -0.08
PLOD3-215ENST00000487563 C10orf25Q5T742 122 aa14.56□□□□□ -0.08
PLOD3-215ENST00000487563 UNQ6190/PRO20217Q6UXQ8 127 aa14.56□□□□□ -0.08
PLOD3-215ENST00000487563 TEX43Q6ZNM6 134 aa14.56□□□□□ -0.08
PLOD3-215ENST00000487563 C2orf88Q9BSF0 95 aa14.56□□□□□ -0.08
PLOD3-215ENST00000487563 PSORS1C2Q9UIG4 136 aa14.56□□□□□ -0.08
PLOD3-215ENST00000487563 A0A087WZ39 114 aa14.55□□□□□ -0.08
PLOD3-215ENST00000487563 PRSS47A8MTI9 375 aa14.55□□□□□ -0.08
PLOD3-215ENST00000487563 LINC00242Q5T6M2 205 aa14.55□□□□□ -0.08
PLOD3-215ENST00000487563 Q6ZN92 141 aa14.55□□□□□ -0.08
PLOD3-215ENST00000487563 CYSLTR1Q9Y271 337 aa14.55□□□□□ -0.08
PLOD3-215ENST00000487563 UBR4Q5T4S7 5183 aa14.55□□□□□ -0.08
PLOD3-215ENST00000487563 Q8N8P6 123 aa14.54□□□□□ -0.08
PLOD3-215ENST00000487563 C6orf48Q9UBA6 75 aa14.54□□□□□ -0.08
PLOD3-215ENST00000487563 C1orf137Q5JT78 98 aa14.53□□□□□ -0.08
PLOD3-215ENST00000487563 C2orf66Q6UXQ4 117 aa14.53□□□□□ -0.08
PLOD3-215ENST00000487563 TLX1NBP0CAT3 122 aa14.52□□□□□ -0.09
PLOD3-215ENST00000487563 GAGE2EQ4V326 116 aa14.52□□□□□ -0.09
PLOD3-215ENST00000487563 GAGE2DQ9UEU5 116 aa14.52□□□□□ -0.09
PLOD3-215ENST00000487563 ORMDL2Q53FV1 153 aa14.51□□□□□ -0.09
PLOD3-215ENST00000487563 UBE2D1P51668 147 aa14.5□□□□□ -0.09
PLOD3-215ENST00000487563 ODF1Q14990 250 aa14.5□□□□□ -0.09
PLOD3-215ENST00000487563 FAM19A5Q7Z5A7 132 aaPredicted RBP14.5□□□□□ -0.09
PLOD3-215ENST00000487563 CTDSP1Q9GZU7 261 aa14.5□□□□□ -0.09
PLOD3-215ENST00000487563 FAM168BA1KXE4 195 aa14.49□□□□□ -0.09
PLOD3-215ENST00000487563 KRTAP10-8P60410 259 aa14.49□□□□□ -0.09
PLOD3-215ENST00000487563 KIAA0087Q14695 138 aa14.49□□□□□ -0.09
PLOD3-215ENST00000487563 PACRGQ96M98 296 aaPredicted RBP14.49□□□□□ -0.09
PLOD3-215ENST00000487563 VCX2Q9H322 139 aa14.49□□□□□ -0.09
PLOD3-215ENST00000487563 ZC2HC1BQ5TFG8 222 aa14.48□□□□□ -0.09
PLOD3-215ENST00000487563 TRBV30A0A0K0K1B3 111 aa14.47□□□□□ -0.09
PLOD3-215ENST00000487563 K7EMI3 77 aa14.47□□□□□ -0.09
PLOD3-215ENST00000487563 C2orf82Q6UX34 121 aa14.47□□□□□ -0.09
PLOD3-215ENST00000487563 LINC01561Q8N1V8 128 aa14.47□□□□□ -0.09
PLOD3-215ENST00000487563 NXT2Q9NPJ8 142 aaKnown RBP14.47□□□□□ -0.09
PLOD3-215ENST00000487563 PRSS2P07478 247 aa14.46□□□□□ -0.09
PLOD3-215ENST00000487563 NPSP0C0P6 89 aa14.45□□□□□ -0.1
PLOD3-215ENST00000487563 LINC00173Q6ZV60 143 aa14.45□□□□□ -0.1
PLOD3-215ENST00000487563 AMELXQ99217 191 aa14.45□□□□□ -0.1
PLOD3-215ENST00000487563 CLLU1Q5K131 121 aa14.44□□□□□ -0.1
PLOD3-215ENST00000487563 TOMM7Q9P0U1 55 aa14.44□□□□□ -0.1
PLOD3-215ENST00000487563 NDUFC2-KCTD14E9PQ53 114 aa14.43□□□□□ -0.1
PLOD3-215ENST00000487563 M0QXV9 152 aa14.43□□□□□ -0.1
PLOD3-215ENST00000487563 IGLV7-43P04211 117 aa14.43□□□□□ -0.1
PLOD3-215ENST00000487563 G0S2P27469 103 aa14.43□□□□□ -0.1
PLOD3-215ENST00000487563 PAPPA-AS1Q5QFB9 102 aa14.43□□□□□ -0.1
PLOD3-215ENST00000487563 IGIPA6NJ69 53 aa14.42□□□□□ -0.1
PLOD3-215ENST00000487563 CKS1BP61024 79 aa14.42□□□□□ -0.1
PLOD3-215ENST00000487563 UBE2BP63146 152 aa14.42□□□□□ -0.1
PLOD3-215ENST00000487563 DIRC1Q969H9 104 aa14.42□□□□□ -0.1
PLOD3-215ENST00000487563 C6orf226Q5I0X4 101 aa14.4□□□□□ -0.1
PLOD3-215ENST00000487563 HERVK_113P63121 156 aa14.39□□□□□ -0.11
PLOD3-215ENST00000487563 SEC11AP67812 179 aa14.39□□□□□ -0.11
PLOD3-215ENST00000487563 KIAA1644Q3SXP7 199 aa14.39□□□□□ -0.11
PLOD3-215ENST00000487563 GEMIN7Q9H840 131 aaKnown RBP14.39□□□□□ -0.11
PLOD3-215ENST00000487563 KRTAP11-1Q8IUC1 163 aa14.38□□□□□ -0.11
PLOD3-215ENST00000487563 ALKBH7Q9BT30 221 aaPredicted RBP14.38□□□□□ -0.11
PLOD3-215ENST00000487563 UQCC3Q6UW78 93 aa14.37□□□□□ -0.11
PLOD3-215ENST00000487563 FAM19A3Q7Z5A8 133 aa14.37□□□□□ -0.11
PLOD3-215ENST00000487563 Q8IZM0 81 aa14.37□□□□□ -0.11
PLOD3-215ENST00000487563 TIMM17AQ99595 171 aa14.37□□□□□ -0.11
PLOD3-215ENST00000487563 TRAV9-1A0A075B6T8 112 aa14.36□□□□□ -0.11
PLOD3-215ENST00000487563 ADCYAP1P18509 176 aa14.36□□□□□ -0.11
PLOD3-215ENST00000487563 C9orf129Q5T035 196 aaKnown RBP14.36□□□□□ -0.11
PLOD3-215ENST00000487563 KRTAP7-1Q8IUC3 87 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms