RNA–Protein interactions for RNA: ENST00000486867.1

SF1-216, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 875 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-216ENST00000486867 LINC00242Q5T6M2 205 aa8.46□□□□□ -1.06
SF1-216ENST00000486867 ERASQ7Z444 233 aa8.46□□□□□ -1.06
SF1-216ENST00000486867 CBLN2Q8IUK8 224 aa8.46□□□□□ -1.06
SF1-216ENST00000486867 URB1-AS1Q96HZ7 61 aa8.46□□□□□ -1.06
SF1-216ENST00000486867 CHAC1Q9BUX1 264 aa8.46□□□□□ -1.06
SF1-216ENST00000486867 PAPPA-AS1Q5QFB9 102 aa8.45□□□□□ -1.06
SF1-216ENST00000486867 TEX43Q6ZNM6 134 aa8.45□□□□□ -1.06
SF1-216ENST00000486867 IGHV3-64A0A075B6Q5 118 aa8.44□□□□□ -1.06
SF1-216ENST00000486867 Q6ZN92 141 aa8.44□□□□□ -1.06
SF1-216ENST00000486867 FA2HQ7L5A8 372 aa8.44□□□□□ -1.06
SF1-216ENST00000486867 SCXQ7RTU7 201 aa8.44□□□□□ -1.06
SF1-216ENST00000486867 LINC01561Q8N1V8 128 aa8.44□□□□□ -1.06
SF1-216ENST00000486867 SRRM2Q9UQ35 2752 aaKnown RBP8.44□□□□□ -1.06
SF1-216ENST00000486867 FAT1Q14517 4588 aa8.43□□□□□ -1.06
SF1-216ENST00000486867 A0A087WZ39 114 aa8.43□□□□□ -1.06
SF1-216ENST00000486867 A0A096LNJ9 63 aa8.43□□□□□ -1.06
SF1-216ENST00000486867 C5orf38Q86SI9 138 aa8.43□□□□□ -1.06
SF1-216ENST00000486867 OR10D4PQ8NGN7 298 aa8.43□□□□□ -1.06
SF1-216ENST00000486867 C2orf48Q96LS8 159 aa8.43□□□□□ -1.06
SF1-216ENST00000486867 C2orf88Q9BSF0 95 aa8.43□□□□□ -1.06
SF1-216ENST00000486867 VCX2Q9H322 139 aa8.43□□□□□ -1.06
SF1-216ENST00000486867 F8WDY8 70 aa8.42□□□□□ -1.06
SF1-216ENST00000486867 APOMO95445 188 aa8.42□□□□□ -1.06
SF1-216ENST00000486867 LINC00614P0C842 121 aa8.42□□□□□ -1.06
SF1-216ENST00000486867 MALP21145 153 aa8.42□□□□□ -1.06
SF1-216ENST00000486867 HAMPP81172 84 aa8.42□□□□□ -1.06
SF1-216ENST00000486867 COX6A2Q02221 97 aa8.42□□□□□ -1.06
SF1-216ENST00000486867 ZC2HC1BQ5TFG8 222 aa8.42□□□□□ -1.06
SF1-216ENST00000486867 CIRBP-AS1Q8TBR5 109 aa8.42□□□□□ -1.06
SF1-216ENST00000486867 SCGB3A1Q96QR1 104 aa8.42□□□□□ -1.06
SF1-216ENST00000486867 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.42□□□□□ -1.06
SF1-216ENST00000486867 VPS13BQ7Z7G8 4022 aa8.42□□□□□ -1.06
SF1-216ENST00000486867 PANO1I0J062 215 aa8.41□□□□□ -1.06
SF1-216ENST00000486867 ZNF561-AS1K7EIQ3 104 aa8.41□□□□□ -1.06
SF1-216ENST00000486867 IGLV4-69A0A075B6H9 119 aa8.4□□□□□ -1.06
SF1-216ENST00000486867 COLCA2A8K830 154 aa8.4□□□□□ -1.06
SF1-216ENST00000486867 RAB5BP61020 215 aa8.4□□□□□ -1.06
SF1-216ENST00000486867 SYCNQ0VAF6 134 aa8.4□□□□□ -1.06
SF1-216ENST00000486867 LINC00526Q96FQ7 95 aa8.4□□□□□ -1.06
SF1-216ENST00000486867 CARD19Q96LW7 228 aa8.4□□□□□ -1.06
SF1-216ENST00000486867 EPM2AB3EWF7 344 aa8.39□□□□□ -1.07
SF1-216ENST00000486867 SEC11AP67812 179 aa8.39□□□□□ -1.07
SF1-216ENST00000486867 SPAG11BQ08648 103 aa8.39□□□□□ -1.07
SF1-216ENST00000486867 KIAA0087Q14695 138 aa8.39□□□□□ -1.07
SF1-216ENST00000486867 RNF151Q2KHN1 245 aa8.39□□□□□ -1.07
SF1-216ENST00000486867 PDZD11Q5EBL8 140 aa8.39□□□□□ -1.07
SF1-216ENST00000486867 Q5VSD8 79 aa8.39□□□□□ -1.07
SF1-216ENST00000486867 SPACA4Q8TDM5 124 aa8.39□□□□□ -1.07
SF1-216ENST00000486867 PKIGQ9Y2B9 76 aa8.39□□□□□ -1.07
SF1-216ENST00000486867 IGLV5-45A0A087WSX0 123 aa8.38□□□□□ -1.07
SF1-216ENST00000486867 HBDP02042 147 aa8.38□□□□□ -1.07
SF1-216ENST00000486867 SMR3BP02814 79 aaPredicted RBP8.38□□□□□ -1.07
SF1-216ENST00000486867 HERVK_113P63121 156 aa8.38□□□□□ -1.07
SF1-216ENST00000486867 Q6ZRU5 148 aa8.38□□□□□ -1.07
SF1-216ENST00000486867 ORAOV1Q8WV07 137 aa8.38□□□□□ -1.07
SF1-216ENST00000486867 CST9LQ9H4G1 147 aa8.38□□□□□ -1.07
SF1-216ENST00000486867 PCLOQ9Y6V0 5065 aa8.38□□□□□ -1.07
SF1-216ENST00000486867 PMVKQ15126 192 aa8.37□□□□□ -1.07
SF1-216ENST00000486867 CHCHD1Q96BP2 118 aaKnown RBP8.37□□□□□ -1.07
SF1-216ENST00000486867 MRPL35Q9NZE8 188 aaKnown RBP8.37□□□□□ -1.07
SF1-216ENST00000486867 ABCA13Q86UQ4 5058 aa8.37□□□□□ -1.07
SF1-216ENST00000486867 TINCRA0A1B0GVN0 87 aa8.36□□□□□ -1.07
SF1-216ENST00000486867 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.36□□□□□ -1.07
SF1-216ENST00000486867 FAM229AH3BQW9 127 aa8.36□□□□□ -1.07
SF1-216ENST00000486867 TRGC2P03986 189 aa8.36□□□□□ -1.07
SF1-216ENST00000486867 CHTF8P0CG12 524 aa8.36□□□□□ -1.07
SF1-216ENST00000486867 KRTAP10-4P60372 401 aaPredicted RBP8.36□□□□□ -1.07
SF1-216ENST00000486867 CAMK2N2Q96S95 79 aa8.36□□□□□ -1.07
SF1-216ENST00000486867 PLAC8Q9NZF1 115 aa8.36□□□□□ -1.07
SF1-216ENST00000486867 A0A096LNI7 61 aa8.35□□□□□ -1.07
SF1-216ENST00000486867 A0A0J9YXV3 536 aa8.35□□□□□ -1.07
SF1-216ENST00000486867 LINC00528Q8N1L1 170 aa8.35□□□□□ -1.07
SF1-216ENST00000486867 CDKN2A-AS1Q9UH64 79 aa8.35□□□□□ -1.07
SF1-216ENST00000486867 A0A087WYN8 130 aa8.34□□□□□ -1.07
SF1-216ENST00000486867 ATP5LO75964 103 aa8.34□□□□□ -1.07
SF1-216ENST00000486867 LINC00474Q9P2X8 69 aa8.34□□□□□ -1.07
SF1-216ENST00000486867 LOC107984640A0A0U1RRK4 108 aa8.33□□□□□ -1.08
SF1-216ENST00000486867 NDUFA1O15239 70 aa8.33□□□□□ -1.08
SF1-216ENST00000486867 TLX1NBP0CAT3 122 aa8.33□□□□□ -1.08
SF1-216ENST00000486867 LINC00310P59036 64 aa8.33□□□□□ -1.08
SF1-216ENST00000486867 PMCHL1Q16048 86 aa8.33□□□□□ -1.08
SF1-216ENST00000486867 Q8IZM0 81 aa8.33□□□□□ -1.08
SF1-216ENST00000486867 GEMIN7Q9H840 131 aaKnown RBP8.33□□□□□ -1.08
SF1-216ENST00000486867 FLG2Q5D862 2391 aaPredicted RBP8.32□□□□□ -1.08
SF1-216ENST00000486867 IGLC3P0DOY3 106 aa8.32□□□□□ -1.08
SF1-216ENST00000486867 PTTG1IPP53801 180 aa8.32□□□□□ -1.08
SF1-216ENST00000486867 C10orf25Q5T742 122 aa8.32□□□□□ -1.08
SF1-216ENST00000486867 TRBV30A0A0K0K1B3 111 aa8.31□□□□□ -1.08
SF1-216ENST00000486867 SMIM1B2RUZ4 78 aa8.31□□□□□ -1.08
SF1-216ENST00000486867 PLA2G1BP04054 148 aaKnown RBP8.31□□□□□ -1.08
SF1-216ENST00000486867 UNQ6190/PRO20217Q6UXQ8 127 aa8.31□□□□□ -1.08
SF1-216ENST00000486867 C6orf48Q9UBA6 75 aa8.31□□□□□ -1.08
SF1-216ENST00000486867 SCO1O75880 301 aa8.3□□□□□ -1.08
SF1-216ENST00000486867 LINC00469Q8N7U9 141 aa8.3□□□□□ -1.08
SF1-216ENST00000486867 IGKV2-24A0A0C4DH68 120 aa8.29□□□□□ -1.08
SF1-216ENST00000486867 MAJINQ3KP22 176 aa8.29□□□□□ -1.08
SF1-216ENST00000486867 BAGE3Q86Y29 109 aa8.29□□□□□ -1.08
SF1-216ENST00000486867 TRAV12-1A0A0B4J245 112 aa8.28□□□□□ -1.08
SF1-216ENST00000486867 IGLV5-39A0A0G2JS06 123 aa8.28□□□□□ -1.08
SF1-216ENST00000486867 HSBP1O75506 76 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms