RNA–Protein interactions for RNA: ENST00000486519.5

U2AF1-211, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-211ENST00000486519 AKR1C8PQ5T2L2 129 aa8.37□□□□□ -1.07
U2AF1-211ENST00000486519 CNFNQ9BYD5 112 aa8.37□□□□□ -1.07
U2AF1-211ENST00000486519 POLR2KP53803 58 aaKnown RBP8.36□□□□□ -1.07
U2AF1-211ENST00000486519 CENPWQ5EE01 88 aa8.36□□□□□ -1.07
U2AF1-211ENST00000486519 MRPL55Q7Z7F7 128 aaKnown RBP8.36□□□□□ -1.07
U2AF1-211ENST00000486519 KRTAP19-1Q8IUB9 90 aa8.36□□□□□ -1.07
U2AF1-211ENST00000486519 MARVELD1Q9BSK0 173 aa8.36□□□□□ -1.07
U2AF1-211ENST00000486519 LBHQ53QV2 105 aaPredicted RBP8.35□□□□□ -1.07
U2AF1-211ENST00000486519 CYTL1Q9NRR1 136 aa8.35□□□□□ -1.07
U2AF1-211ENST00000486519 CSDC2Q9Y534 153 aaKnown RBP8.35□□□□□ -1.07
U2AF1-211ENST00000486519 TRBV30A0A0K0K1B3 111 aa8.34□□□□□ -1.07
U2AF1-211ENST00000486519 RAB19A4D1S5 217 aa8.34□□□□□ -1.07
U2AF1-211ENST00000486519 UPK1BO75841 260 aa8.34□□□□□ -1.07
U2AF1-211ENST00000486519 ENKURQ8TC29 256 aa8.34□□□□□ -1.07
U2AF1-211ENST00000486519 PACRGQ96M98 296 aaPredicted RBP8.34□□□□□ -1.07
U2AF1-211ENST00000486519 LINC00167Q96N53 147 aa8.34□□□□□ -1.07
U2AF1-211ENST00000486519 ST20Q9HBF5 79 aa8.34□□□□□ -1.07
U2AF1-211ENST00000486519 IGLV8-61A0A075B6I0 122 aa8.33□□□□□ -1.08
U2AF1-211ENST00000486519 GAGE10A6NGK3 116 aa8.33□□□□□ -1.08
U2AF1-211ENST00000486519 UBE2AP49459 152 aa8.33□□□□□ -1.08
U2AF1-211ENST00000486519 PCOTHQ58A44 107 aa8.33□□□□□ -1.08
U2AF1-211ENST00000486519 TRBV27A0A0K0K1C4 114 aa8.32□□□□□ -1.08
U2AF1-211ENST00000486519 ZNF727A8MUV8 499 aa8.31□□□□□ -1.08
U2AF1-211ENST00000486519 PRLHP81277 87 aa8.31□□□□□ -1.08
U2AF1-211ENST00000486519 DAND5Q8N907 189 aa8.31□□□□□ -1.08
U2AF1-211ENST00000486519 XKRY2A2RUG3 117 aa8.3□□□□□ -1.08
U2AF1-211ENST00000486519 PFDN1O60925 122 aa8.3□□□□□ -1.08
U2AF1-211ENST00000486519 SPAG11AQ6PDA7 123 aa8.3□□□□□ -1.08
U2AF1-211ENST00000486519 NUDT10Q8NFP7 164 aa8.3□□□□□ -1.08
U2AF1-211ENST00000486519 NUDT11Q96G61 164 aa8.3□□□□□ -1.08
U2AF1-211ENST00000486519 TP73-AS1Q9UF72 201 aa8.3□□□□□ -1.08
U2AF1-211ENST00000486519 TRBV20OR9-2A0A075B6H5 130 aa8.29□□□□□ -1.08
U2AF1-211ENST00000486519 TNFRSF6BO95407 300 aa8.29□□□□□ -1.08
U2AF1-211ENST00000486519 IFITM3Q01628 133 aa8.29□□□□□ -1.08
U2AF1-211ENST00000486519 TEX261Q6UWH6 196 aa8.29□□□□□ -1.08
U2AF1-211ENST00000486519 C11orf52Q96A22 123 aa8.29□□□□□ -1.08
U2AF1-211ENST00000486519 BORCS7-ASMTA0A0B4J1R7 106 aa8.28□□□□□ -1.08
U2AF1-211ENST00000486519 RPL39P62891 51 aaKnown RBP8.28□□□□□ -1.08
U2AF1-211ENST00000486519 SFT2D1Q8WV19 159 aa8.28□□□□□ -1.08
U2AF1-211ENST00000486519 SMKR1H3BMG3 65 aa8.27□□□□□ -1.09
U2AF1-211ENST00000486519 SCO1O75880 301 aa8.27□□□□□ -1.09
U2AF1-211ENST00000486519 FCER1GP30273 86 aa8.26□□□□□ -1.09
U2AF1-211ENST00000486519 PNRC1Q12796 327 aaPredicted RBP8.26□□□□□ -1.09
U2AF1-211ENST00000486519 RGS21Q2M5E4 152 aa8.26□□□□□ -1.09
U2AF1-211ENST00000486519 KCNRGQ8N5I3 272 aa8.26□□□□□ -1.09
U2AF1-211ENST00000486519 Q8NBF4 154 aa8.26□□□□□ -1.09
U2AF1-211ENST00000486519 A0A1B0GVG6 124 aa8.25□□□□□ -1.09
U2AF1-211ENST00000486519 RPL32P62910 135 aaKnown RBP8.25□□□□□ -1.09
U2AF1-211ENST00000486519 MBD3L1Q8WWY6 194 aa8.25□□□□□ -1.09
U2AF1-211ENST00000486519 PLEKHB2Q96CS7 222 aa8.25□□□□□ -1.09
U2AF1-211ENST00000486519 TIMM21Q9BVV7 248 aa8.25□□□□□ -1.09
U2AF1-211ENST00000486519 SMIM15Q7Z3B0 74 aa8.24□□□□□ -1.09
U2AF1-211ENST00000486519 FAM213BQ8TBF2 198 aa8.24□□□□□ -1.09
U2AF1-211ENST00000486519 GNG4P50150 75 aa8.23□□□□□ -1.09
U2AF1-211ENST00000486519 CCL20P78556 96 aa8.23□□□□□ -1.09
U2AF1-211ENST00000486519 FAM210AQ96ND0 272 aa8.23□□□□□ -1.09
U2AF1-211ENST00000486519 IFITM10A6NMD0 228 aa8.22□□□□□ -1.09
U2AF1-211ENST00000486519 C4orf48Q5BLP8 95 aa8.22□□□□□ -1.09
U2AF1-211ENST00000486519 Q8N377 158 aa8.22□□□□□ -1.09
U2AF1-211ENST00000486519 IGKV2-28A0A075B6P5 120 aa8.21□□□□□ -1.1
U2AF1-211ENST00000486519 VCYO14598 125 aa8.21□□□□□ -1.1
U2AF1-211ENST00000486519 IGKV2D-28P01615 120 aa8.21□□□□□ -1.1
U2AF1-211ENST00000486519 RAB4AP20338 218 aa8.21□□□□□ -1.1
U2AF1-211ENST00000486519 NRACQ8N912 160 aa8.21□□□□□ -1.1
U2AF1-211ENST00000486519 FXYD6-FXYD2A0A087WZ82 144 aa8.2□□□□□ -1.1
U2AF1-211ENST00000486519 TGIF2-C20orf24A0A0A6YYL0 155 aa8.2□□□□□ -1.1
U2AF1-211ENST00000486519 K7EN84 100 aa8.2□□□□□ -1.1
U2AF1-211ENST00000486519 AMN1Q8IY45 258 aa8.2□□□□□ -1.1
U2AF1-211ENST00000486519 KRTAP9-8Q9BYQ0 159 aa8.2□□□□□ -1.1
U2AF1-211ENST00000486519 TMEM238C9JI98 176 aa8.19□□□□□ -1.1
U2AF1-211ENST00000486519 FAM19A1Q7Z5A9 133 aa8.19□□□□□ -1.1
U2AF1-211ENST00000486519 LCE2BO14633 110 aa8.18□□□□□ -1.1
U2AF1-211ENST00000486519 HBBP68871 147 aa8.18□□□□□ -1.1
U2AF1-211ENST00000486519 SMAGPQ0VAQ4 97 aa8.18□□□□□ -1.1
U2AF1-211ENST00000486519 COX6B2Q6YFQ2 88 aa8.18□□□□□ -1.1
U2AF1-211ENST00000486519 SMIM12Q96EX1 92 aa8.18□□□□□ -1.1
U2AF1-211ENST00000486519 TOMM7Q9P0U1 55 aa8.18□□□□□ -1.1
U2AF1-211ENST00000486519 GNG13Q9P2W3 67 aa8.18□□□□□ -1.1
U2AF1-211ENST00000486519 SUMO2P61956 95 aaKnown RBP8.17□□□□□ -1.1
U2AF1-211ENST00000486519 KIR2DL4Q99706 377 aa8.17□□□□□ -1.1
U2AF1-211ENST00000486519 SPINK1P00995 79 aa8.16□□□□□ -1.1
U2AF1-211ENST00000486519 MRPS36P82909 103 aaKnown RBP8.16□□□□□ -1.1
U2AF1-211ENST00000486519 SPRR4Q96PI1 79 aa8.16□□□□□ -1.1
U2AF1-211ENST00000486519 IGLV5-37A0A075B6J1 123 aa8.15□□□□□ -1.1
U2AF1-211ENST00000486519 CKS1BP61024 79 aa8.14□□□□□ -1.11
U2AF1-211ENST00000486519 ZC2HC1BQ5TFG8 222 aa8.14□□□□□ -1.11
U2AF1-211ENST00000486519 TMEM126AQ9H061 195 aa8.14□□□□□ -1.11
U2AF1-211ENST00000486519 TMEM191AQ9H0A3 160 aa8.14□□□□□ -1.11
U2AF1-211ENST00000486519 NDUFA12Q9UI09 145 aa8.14□□□□□ -1.11
U2AF1-211ENST00000486519 CBLN2Q8IUK8 224 aa8.13□□□□□ -1.11
U2AF1-211ENST00000486519 TMEM18Q96B42 140 aa8.13□□□□□ -1.11
U2AF1-211ENST00000486519 SPANXA1Q9NS26 97 aa8.13□□□□□ -1.11
U2AF1-211ENST00000486519 M0R378 163 aa8.12□□□□□ -1.11
U2AF1-211ENST00000486519 H2AFB1P0C5Y9 115 aa8.12□□□□□ -1.11
U2AF1-211ENST00000486519 OCC1Q8TAD7 63 aa8.12□□□□□ -1.11
U2AF1-211ENST00000486519 HIGD2AQ9BW72 106 aa8.12□□□□□ -1.11
U2AF1-211ENST00000486519 PRSS2P07478 247 aa8.11□□□□□ -1.11
U2AF1-211ENST00000486519 MANBALQ9NQG1 85 aa8.11□□□□□ -1.11
U2AF1-211ENST00000486519 BIN3Q9NQY0 253 aa8.11□□□□□ -1.11
U2AF1-211ENST00000486519 MED9Q9NWA0 146 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms