RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 PDZD11Q5EBL8 140 aa7.53□□□□□ -1.2
NUP50-216ENST00000486184 KRTAP26-1Q6PEX3 210 aa7.53□□□□□ -1.2
NUP50-216ENST00000486184 SPATA12Q7Z6I5 190 aa7.53□□□□□ -1.2
NUP50-216ENST00000486184 Q8N814 137 aa7.53□□□□□ -1.2
NUP50-216ENST00000486184 LEPROTL1O95214 131 aa7.52□□□□□ -1.21
NUP50-216ENST00000486184 APOMO95445 188 aa7.52□□□□□ -1.21
NUP50-216ENST00000486184 UBE2D1P51668 147 aa7.52□□□□□ -1.21
NUP50-216ENST00000486184 ZC2HC1BQ5TFG8 222 aa7.52□□□□□ -1.21
NUP50-216ENST00000486184 LINC00173Q6ZV60 143 aa7.52□□□□□ -1.21
NUP50-216ENST00000486184 GEMIN7Q9H840 131 aaKnown RBP7.52□□□□□ -1.21
NUP50-216ENST00000486184 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.51□□□□□ -1.21
NUP50-216ENST00000486184 A0A1B0GVY2 172 aa7.51□□□□□ -1.21
NUP50-216ENST00000486184 hDV102S1A0JD36 115 aa7.51□□□□□ -1.21
NUP50-216ENST00000486184 PRSS1P07477 247 aa7.51□□□□□ -1.21
NUP50-216ENST00000486184 HERVK_113P63121 156 aa7.51□□□□□ -1.21
NUP50-216ENST00000486184 WFDC2Q14508 124 aa7.51□□□□□ -1.21
NUP50-216ENST00000486184 LINC00242Q5T6M2 205 aa7.51□□□□□ -1.21
NUP50-216ENST00000486184 CDPF1Q6NVV7 123 aa7.51□□□□□ -1.21
NUP50-216ENST00000486184 NTN5Q8WTR8 489 aaPredicted RBP7.51□□□□□ -1.21
NUP50-216ENST00000486184 IFI27L1Q96BM0 104 aa7.51□□□□□ -1.21
NUP50-216ENST00000486184 HSPB8Q9UJY1 196 aa7.51□□□□□ -1.21
NUP50-216ENST00000486184 FRAS1Q86XX4 4008 aa7.5□□□□□ -1.21
NUP50-216ENST00000486184 IGLV5-52A0A0A0MRZ9 124 aa7.5□□□□□ -1.21
NUP50-216ENST00000486184 IGHV1-58A0A0C4DH39 117 aa7.5□□□□□ -1.21
NUP50-216ENST00000486184 LINC00310P59036 64 aa7.5□□□□□ -1.21
NUP50-216ENST00000486184 C5orf38Q86SI9 138 aa7.5□□□□□ -1.21
NUP50-216ENST00000486184 CST9LQ9H4G1 147 aa7.5□□□□□ -1.21
NUP50-216ENST00000486184 DNAH2Q9P225 4427 aa7.49□□□□□ -1.21
NUP50-216ENST00000486184 A0A0J9YXV3 536 aa7.49□□□□□ -1.21
NUP50-216ENST00000486184 NUPR1O60356 82 aa7.49□□□□□ -1.21
NUP50-216ENST00000486184 FABP4P15090 132 aa7.49□□□□□ -1.21
NUP50-216ENST00000486184 DNAH10Q8IVF4 4471 aa7.48□□□□□ -1.21
NUP50-216ENST00000486184 TINCRA0A1B0GVN0 87 aa7.48□□□□□ -1.21
NUP50-216ENST00000486184 C16orf90A8MZG2 172 aa7.48□□□□□ -1.21
NUP50-216ENST00000486184 H0Y8G0 127 aa7.48□□□□□ -1.21
NUP50-216ENST00000486184 ZNF561-AS1K7EIQ3 104 aa7.48□□□□□ -1.21
NUP50-216ENST00000486184 S100A6P06703 90 aa7.48□□□□□ -1.21
NUP50-216ENST00000486184 HIGD2BQ4VC39 106 aa7.48□□□□□ -1.21
NUP50-216ENST00000486184 FAM19A3Q7Z5A8 133 aa7.48□□□□□ -1.21
NUP50-216ENST00000486184 LINC00469Q8N7U9 141 aa7.48□□□□□ -1.21
NUP50-216ENST00000486184 C15orf56Q8N910 161 aa7.48□□□□□ -1.21
NUP50-216ENST00000486184 PACRGQ96M98 296 aaPredicted RBP7.48□□□□□ -1.21
NUP50-216ENST00000486184 GVQW2A0A096LPI5 108 aaPredicted RBP7.47□□□□□ -1.21
NUP50-216ENST00000486184 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.47□□□□□ -1.21
NUP50-216ENST00000486184 IGHV3OR16-9A0A0B4J2B5 98 aa7.47□□□□□ -1.21
NUP50-216ENST00000486184 KRTAP10-2P60368 255 aa7.47□□□□□ -1.21
NUP50-216ENST00000486184 COX6A2Q02221 97 aa7.47□□□□□ -1.21
NUP50-216ENST00000486184 CHAC1Q9BUX1 264 aa7.47□□□□□ -1.21
NUP50-216ENST00000486184 CHTOPQ9Y3Y2 248 aaKnown RBP7.47□□□□□ -1.21
NUP50-216ENST00000486184 DNAH17Q9UFH2 4485 aa7.47□□□□□ -1.21
NUP50-216ENST00000486184 A0A087WZ39 114 aa7.46□□□□□ -1.22
NUP50-216ENST00000486184 TRAV12-1A0A0B4J245 112 aa7.46□□□□□ -1.22
NUP50-216ENST00000486184 H3BRM9 83 aa7.46□□□□□ -1.22
NUP50-216ENST00000486184 COA6Q5JTJ3 125 aaKnown RBP7.46□□□□□ -1.22
NUP50-216ENST00000486184 OR10D4PQ8NGN7 298 aa7.46□□□□□ -1.22
NUP50-216ENST00000486184 ORAOV1Q8WV07 137 aa7.46□□□□□ -1.22
NUP50-216ENST00000486184 MAP1LC3CQ9BXW4 147 aa7.46□□□□□ -1.22
NUP50-216ENST00000486184 KRTAP17-1Q9BYP8 105 aa7.46□□□□□ -1.22
NUP50-216ENST00000486184 PRSS2P07478 247 aa7.45□□□□□ -1.22
NUP50-216ENST00000486184 IGLC3P0DOY3 106 aa7.45□□□□□ -1.22
NUP50-216ENST00000486184 FUSP35637 526 aaKnown RBP eCLIP7.45□□□□□ -1.22
NUP50-216ENST00000486184 SPAG11BQ08648 103 aa7.45□□□□□ -1.22
NUP50-216ENST00000486184 LINC01561Q8N1V8 128 aa7.45□□□□□ -1.22
NUP50-216ENST00000486184 CDKN2A-AS1Q9UH64 79 aa7.45□□□□□ -1.22
NUP50-216ENST00000486184 IGHV3-64A0A075B6Q5 118 aa7.44□□□□□ -1.22
NUP50-216ENST00000486184 GCSHP23434 173 aa7.44□□□□□ -1.22
NUP50-216ENST00000486184 S100A2P29034 98 aa7.44□□□□□ -1.22
NUP50-216ENST00000486184 IGLV4-69A0A075B6H9 119 aa7.43□□□□□ -1.22
NUP50-216ENST00000486184 F8VRH5 84 aa7.43□□□□□ -1.22
NUP50-216ENST00000486184 CNBPP62633 177 aaKnown RBP7.43□□□□□ -1.22
NUP50-216ENST00000486184 TMEM170BQ5T4T1 132 aa7.43□□□□□ -1.22
NUP50-216ENST00000486184 CAMK2N2Q96S95 79 aa7.43□□□□□ -1.22
NUP50-216ENST00000486184 TOMM7Q9P0U1 55 aa7.43□□□□□ -1.22
NUP50-216ENST00000486184 IGLV5-45A0A087WSX0 123 aa7.42□□□□□ -1.22
NUP50-216ENST00000486184 SYCNQ0VAF6 134 aa7.42□□□□□ -1.22
NUP50-216ENST00000486184 LINC00526Q96FQ7 95 aa7.42□□□□□ -1.22
NUP50-216ENST00000486184 CARD19Q96LW7 228 aa7.42□□□□□ -1.22
NUP50-216ENST00000486184 MRPL35Q9NZE8 188 aaKnown RBP7.42□□□□□ -1.22
NUP50-216ENST00000486184 C11orf86A6NJI1 115 aa7.41□□□□□ -1.22
NUP50-216ENST00000486184 F8WDY8 70 aa7.41□□□□□ -1.22
NUP50-216ENST00000486184 NDUFA1O15239 70 aa7.41□□□□□ -1.22
NUP50-216ENST00000486184 SPINK8P0C7L1 97 aa7.41□□□□□ -1.22
NUP50-216ENST00000486184 ZNF22P17026 224 aaPredicted RBP7.41□□□□□ -1.22
NUP50-216ENST00000486184 PLNP26678 52 aa7.41□□□□□ -1.22
NUP50-216ENST00000486184 C2orf48Q96LS8 159 aa7.41□□□□□ -1.22
NUP50-216ENST00000486184 PKIGQ9Y2B9 76 aa7.41□□□□□ -1.22
NUP50-216ENST00000486184 FAT2Q9NYQ8 4349 aa7.4□□□□□ -1.22
NUP50-216ENST00000486184 SMIM1B2RUZ4 78 aa7.4□□□□□ -1.22
NUP50-216ENST00000486184 SYS1-DBNDD2H3BUS1 97 aa7.4□□□□□ -1.22
NUP50-216ENST00000486184 KRTDAPP60985 99 aa7.4□□□□□ -1.22
NUP50-216ENST00000486184 CKS1BP61024 79 aa7.4□□□□□ -1.22
NUP50-216ENST00000486184 ODF1Q14990 250 aa7.4□□□□□ -1.22
NUP50-216ENST00000486184 C6orf226Q5I0X4 101 aa7.4□□□□□ -1.22
NUP50-216ENST00000486184 Q8IZM0 81 aa7.4□□□□□ -1.22
NUP50-216ENST00000486184 C9orf163Q8N9P6 203 aa7.4□□□□□ -1.22
NUP50-216ENST00000486184 PKD1P98161 4303 aa7.4□□□□□ -1.23
NUP50-216ENST00000486184 DPM2O94777 84 aa7.39□□□□□ -1.23
NUP50-216ENST00000486184 LINC01620Q4KN68 170 aa7.39□□□□□ -1.23
NUP50-216ENST00000486184 HIST3H2BBQ8N257 126 aa7.39□□□□□ -1.23
NUP50-216ENST00000486184 COX7B2Q8TF08 81 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms