RNA–Protein interactions for RNA: ENST00000486021.5

CPNE1-226, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-226ENST00000486021 HIST1H2BKO60814 126 aa4.8□□□□□ -1.64
CPNE1-226ENST00000486021 HIST1H2BJP06899 126 aa4.8□□□□□ -1.64
CPNE1-226ENST00000486021 HIST1H2BOP23527 126 aa4.8□□□□□ -1.64
CPNE1-226ENST00000486021 HIST1H2BBP33778 126 aa4.8□□□□□ -1.64
CPNE1-226ENST00000486021 HIST1H2BDP58876 126 aa4.8□□□□□ -1.64
CPNE1-226ENST00000486021 HIST1H2BCP62807 126 aa4.8□□□□□ -1.64
CPNE1-226ENST00000486021 RPL32P62910 135 aaKnown RBP4.8□□□□□ -1.64
CPNE1-226ENST00000486021 HBBP68871 147 aa4.8□□□□□ -1.64
CPNE1-226ENST00000486021 SRSF3P84103 164 aaKnown RBP4.8□□□□□ -1.64
CPNE1-226ENST00000486021 HIST2H2BEQ16778 126 aa4.8□□□□□ -1.64
CPNE1-226ENST00000486021 MAJINQ3KP22 176 aa4.8□□□□□ -1.64
CPNE1-226ENST00000486021 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.8□□□□□ -1.64
CPNE1-226ENST00000486021 FAM104BQ5XKR9 115 aa4.8□□□□□ -1.64
CPNE1-226ENST00000486021 ATP5L2Q7Z4Y8 100 aa4.8□□□□□ -1.64
CPNE1-226ENST00000486021 HIST1H2BHQ93079 126 aa4.8□□□□□ -1.64
CPNE1-226ENST00000486021 CARD19Q96LW7 228 aa4.8□□□□□ -1.64
CPNE1-226ENST00000486021 HIST1H2BNQ99877 126 aa4.8□□□□□ -1.64
CPNE1-226ENST00000486021 HIST1H2BMQ99879 126 aa4.8□□□□□ -1.64
CPNE1-226ENST00000486021 IGLV4-69A0A075B6H9 119 aa4.79□□□□□ -1.64
CPNE1-226ENST00000486021 TRBV24-1A0A075B6N3 115 aa4.79□□□□□ -1.64
CPNE1-226ENST00000486021 A0A087WYN8 130 aa4.79□□□□□ -1.64
CPNE1-226ENST00000486021 LOC107984640A0A0U1RRK4 108 aa4.79□□□□□ -1.64
CPNE1-226ENST00000486021 SCGB1D1O95968 90 aa4.79□□□□□ -1.64
CPNE1-226ENST00000486021 TSHBP01222 138 aa4.79□□□□□ -1.64
CPNE1-226ENST00000486021 CAMPP49913 170 aa4.79□□□□□ -1.64
CPNE1-226ENST00000486021 COX6A2Q02221 97 aa4.79□□□□□ -1.64
CPNE1-226ENST00000486021 SYCNQ0VAF6 134 aa4.79□□□□□ -1.64
CPNE1-226ENST00000486021 HIGD2BQ4VC39 106 aa4.79□□□□□ -1.64
CPNE1-226ENST00000486021 STPG4Q8N801 248 aa4.79□□□□□ -1.64
CPNE1-226ENST00000486021 C15orf56Q8N910 161 aa4.79□□□□□ -1.64
CPNE1-226ENST00000486021 SPACA4Q8TDM5 124 aa4.79□□□□□ -1.64
CPNE1-226ENST00000486021 ANAPC16Q96DE5 110 aa4.79□□□□□ -1.64
CPNE1-226ENST00000486021 HIST1H2BLQ99880 126 aa4.79□□□□□ -1.64
CPNE1-226ENST00000486021 SPANXA1Q9NS26 97 aa4.79□□□□□ -1.64
CPNE1-226ENST00000486021 PLAC8Q9NZF1 115 aa4.79□□□□□ -1.64
CPNE1-226ENST00000486021 LAMTOR2Q9Y2Q5 125 aa4.79□□□□□ -1.64
CPNE1-226ENST00000486021 K7EMI3 77 aa4.78□□□□□ -1.64
CPNE1-226ENST00000486021 TRGC2P03986 189 aa4.78□□□□□ -1.64
CPNE1-226ENST00000486021 IFI27P40305 119 aaPredicted RBP4.78□□□□□ -1.64
CPNE1-226ENST00000486021 FOXI1Q12951 378 aa4.78□□□□□ -1.64
CPNE1-226ENST00000486021 MRPL51Q4U2R6 128 aaKnown RBP4.78□□□□□ -1.64
CPNE1-226ENST00000486021 COA6Q5JTJ3 125 aaKnown RBP4.78□□□□□ -1.64
CPNE1-226ENST00000486021 ORMDL3Q8N138 153 aa4.78□□□□□ -1.64
CPNE1-226ENST00000486021 C2orf48Q96LS8 159 aa4.78□□□□□ -1.64
CPNE1-226ENST00000486021 CAMK2N2Q96S95 79 aa4.78□□□□□ -1.64
CPNE1-226ENST00000486021 IMMP2LQ96T52 175 aa4.78□□□□□ -1.64
CPNE1-226ENST00000486021 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.78□□□□□ -1.64
CPNE1-226ENST00000486021 TGIF2-C20orf24A0A0A6YYL0 155 aa4.77□□□□□ -1.65
CPNE1-226ENST00000486021 IGKV2-24A0A0C4DH68 120 aa4.77□□□□□ -1.65
CPNE1-226ENST00000486021 LINC01549A6NIU2 74 aa4.77□□□□□ -1.65
CPNE1-226ENST00000486021 TNFRSF6BO95407 300 aa4.77□□□□□ -1.65
CPNE1-226ENST00000486021 PTTG1IPP53801 180 aa4.77□□□□□ -1.65
CPNE1-226ENST00000486021 RNF151Q2KHN1 245 aa4.77□□□□□ -1.65
CPNE1-226ENST00000486021 PDZD11Q5EBL8 140 aa4.77□□□□□ -1.65
CPNE1-226ENST00000486021 PAPPA-AS1Q5QFB9 102 aa4.77□□□□□ -1.65
CPNE1-226ENST00000486021 REG3GQ6UW15 175 aa4.77□□□□□ -1.65
CPNE1-226ENST00000486021 Q6ZN92 141 aa4.77□□□□□ -1.65
CPNE1-226ENST00000486021 ORAOV1Q8WV07 137 aa4.77□□□□□ -1.65
CPNE1-226ENST00000486021 MIEN1Q9BRT3 115 aa4.77□□□□□ -1.65
CPNE1-226ENST00000486021 UBE2D4Q9Y2X8 147 aa4.77□□□□□ -1.65
CPNE1-226ENST00000486021 DNAH5Q8TE73 4624 aa4.76□□□□□ -1.65
CPNE1-226ENST00000486021 TRAV13-1A0A0B4J241 112 aa4.76□□□□□ -1.65
CPNE1-226ENST00000486021 APOBP04114 4563 aaKnown RBP4.76□□□□□ -1.65
CPNE1-226ENST00000486021 SEC11AP67812 179 aa4.76□□□□□ -1.65
CPNE1-226ENST00000486021 MRPS36P82909 103 aaKnown RBP4.76□□□□□ -1.65
CPNE1-226ENST00000486021 Q6ZRP5 223 aa4.76□□□□□ -1.65
CPNE1-226ENST00000486021 TMEM136Q6ZRR5 245 aa4.76□□□□□ -1.65
CPNE1-226ENST00000486021 NRACQ8N912 160 aa4.76□□□□□ -1.65
CPNE1-226ENST00000486021 YPEL4Q96NS1 127 aa4.76□□□□□ -1.65
CPNE1-226ENST00000486021 VAMP8Q9BV40 100 aa4.76□□□□□ -1.65
CPNE1-226ENST00000486021 SMIM2Q9BVW6 85 aa4.76□□□□□ -1.65
CPNE1-226ENST00000486021 SNHG12Q9BXW3 62 aa4.76□□□□□ -1.65
CPNE1-226ENST00000486021 MAP1LC3AQ9H492 121 aa4.76□□□□□ -1.65
CPNE1-226ENST00000486021 TMEM238LA0A1B0GVL6 79 aa4.75□□□□□ -1.65
CPNE1-226ENST00000486021 D6R8Y8 96 aa4.75□□□□□ -1.65
CPNE1-226ENST00000486021 SMKR1H3BMG3 65 aa4.75□□□□□ -1.65
CPNE1-226ENST00000486021 K7ERU9 68 aa4.75□□□□□ -1.65
CPNE1-226ENST00000486021 NDUFA1O15239 70 aa4.75□□□□□ -1.65
CPNE1-226ENST00000486021 NPSP0C0P6 89 aa4.75□□□□□ -1.65
CPNE1-226ENST00000486021 ORMDL2Q53FV1 153 aa4.75□□□□□ -1.65
CPNE1-226ENST00000486021 MRPL54Q6P161 138 aaKnown RBP4.75□□□□□ -1.65
CPNE1-226ENST00000486021 SPINK6Q6UWN8 80 aa4.75□□□□□ -1.65
CPNE1-226ENST00000486021 PRSS3P2Q8NHM4 247 aa4.75□□□□□ -1.65
CPNE1-226ENST00000486021 PRELID3AQ96N28 172 aa4.75□□□□□ -1.65
CPNE1-226ENST00000486021 VPS25Q9BRG1 176 aa4.75□□□□□ -1.65
CPNE1-226ENST00000486021 IFITM10A6NMD0 228 aa4.74□□□□□ -1.65
CPNE1-226ENST00000486021 SLPIP03973 132 aa4.74□□□□□ -1.65
CPNE1-226ENST00000486021 CHTF8P0CG12 524 aa4.74□□□□□ -1.65
CPNE1-226ENST00000486021 COX19Q49B96 90 aa4.74□□□□□ -1.65
CPNE1-226ENST00000486021 TEX43Q6ZNM6 134 aa4.74□□□□□ -1.65
CPNE1-226ENST00000486021 UQCR10Q9UDW1 63 aa4.74□□□□□ -1.65
CPNE1-226ENST00000486021 PLA2G2DQ9UNK4 145 aa4.74□□□□□ -1.65
CPNE1-226ENST00000486021 PYGO1Q9Y3Y4 419 aa4.74□□□□□ -1.65
CPNE1-226ENST00000486021 A0A096LNI7 61 aa4.73□□□□□ -1.65
CPNE1-226ENST00000486021 PRSS47A8MTI9 375 aa4.73□□□□□ -1.65
CPNE1-226ENST00000486021 C9JQL5 133 aa4.73□□□□□ -1.65
CPNE1-226ENST00000486021 PRSS2P07478 247 aa4.73□□□□□ -1.65
CPNE1-226ENST00000486021 KRTAP10-4P60372 401 aaPredicted RBP4.73□□□□□ -1.65
CPNE1-226ENST00000486021 RPL18AQ02543 176 aaKnown RBP4.73□□□□□ -1.65
CPNE1-226ENST00000486021 SPAG11BQ08648 103 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms