RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 UBE2D1P51668 147 aa7.69□□□□□ -1.18
HPS4-214ENST00000485842 LINC00242Q5T6M2 205 aa7.69□□□□□ -1.18
HPS4-214ENST00000485842 LINC00526Q96FQ7 95 aa7.69□□□□□ -1.18
HPS4-214ENST00000485842 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.68□□□□□ -1.18
HPS4-214ENST00000485842 CNBPP62633 177 aaKnown RBP7.68□□□□□ -1.18
HPS4-214ENST00000485842 HAMPP81172 84 aa7.68□□□□□ -1.18
HPS4-214ENST00000485842 BAGE3Q86Y29 109 aa7.68□□□□□ -1.18
HPS4-214ENST00000485842 DYNC1H1Q14204 4646 aaKnown RBP7.67□□□□□ -1.18
HPS4-214ENST00000485842 IGHV3OR16-9A0A0B4J2B5 98 aa7.67□□□□□ -1.18
HPS4-214ENST00000485842 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.67□□□□□ -1.18
HPS4-214ENST00000485842 ZNF561-AS1K7EIQ3 104 aa7.67□□□□□ -1.18
HPS4-214ENST00000485842 APOMO95445 188 aa7.67□□□□□ -1.18
HPS4-214ENST00000485842 SLPIP03973 132 aa7.67□□□□□ -1.18
HPS4-214ENST00000485842 COX6A2Q02221 97 aa7.67□□□□□ -1.18
HPS4-214ENST00000485842 C9orf163Q8N9P6 203 aa7.67□□□□□ -1.18
HPS4-214ENST00000485842 CHCHD1Q96BP2 118 aaKnown RBP7.67□□□□□ -1.18
HPS4-214ENST00000485842 ATP6V1G1O75348 118 aa7.66□□□□□ -1.18
HPS4-214ENST00000485842 SPAG11BQ08648 103 aa7.66□□□□□ -1.18
HPS4-214ENST00000485842 ORAOV1Q8WV07 137 aa7.66□□□□□ -1.18
HPS4-214ENST00000485842 FAM30AQ9NZY2 134 aa7.66□□□□□ -1.18
HPS4-214ENST00000485842 IGLV4-69A0A075B6H9 119 aa7.65□□□□□ -1.18
HPS4-214ENST00000485842 A0A0J9YXV3 536 aa7.65□□□□□ -1.18
HPS4-214ENST00000485842 HSBP1O75506 76 aa7.65□□□□□ -1.18
HPS4-214ENST00000485842 S100A1P23297 94 aa7.65□□□□□ -1.18
HPS4-214ENST00000485842 XGP55808 180 aa7.65□□□□□ -1.18
HPS4-214ENST00000485842 NDUFA6P56556 154 aa7.65□□□□□ -1.18
HPS4-214ENST00000485842 PDZD11Q5EBL8 140 aa7.65□□□□□ -1.18
HPS4-214ENST00000485842 GEMIN7Q9H840 131 aaKnown RBP7.65□□□□□ -1.18
HPS4-214ENST00000485842 DNAH5Q8TE73 4624 aa7.65□□□□□ -1.19
HPS4-214ENST00000485842 IGHV3-64A0A075B6Q5 118 aa7.64□□□□□ -1.19
HPS4-214ENST00000485842 A0A087WZ39 114 aa7.64□□□□□ -1.19
HPS4-214ENST00000485842 SERF1AO75920 110 aa7.64□□□□□ -1.19
HPS4-214ENST00000485842 SEC11AP67812 179 aa7.64□□□□□ -1.19
HPS4-214ENST00000485842 PMVKQ15126 192 aa7.64□□□□□ -1.19
HPS4-214ENST00000485842 OR10D4PQ8NGN7 298 aa7.64□□□□□ -1.19
HPS4-214ENST00000485842 CARD19Q96LW7 228 aa7.64□□□□□ -1.19
HPS4-214ENST00000485842 CST9LQ9H4G1 147 aa7.64□□□□□ -1.19
HPS4-214ENST00000485842 LRP1BQ9NZR2 4599 aa7.63□□□□□ -1.19
HPS4-214ENST00000485842 ATP5LO75964 103 aa7.63□□□□□ -1.19
HPS4-214ENST00000485842 HERVK_113P63121 156 aa7.63□□□□□ -1.19
HPS4-214ENST00000485842 SYCNQ0VAF6 134 aa7.63□□□□□ -1.19
HPS4-214ENST00000485842 Q6ZSA8 131 aa7.63□□□□□ -1.19
HPS4-214ENST00000485842 FAM19A3Q7Z5A8 133 aa7.63□□□□□ -1.19
HPS4-214ENST00000485842 FAM19A2Q8N3H0 131 aa7.63□□□□□ -1.19
HPS4-214ENST00000485842 LINC00469Q8N7U9 141 aa7.63□□□□□ -1.19
HPS4-214ENST00000485842 CAMK2N2Q96S95 79 aa7.63□□□□□ -1.19
HPS4-214ENST00000485842 LINC00310P59036 64 aa7.62□□□□□ -1.19
HPS4-214ENST00000485842 SDIM1Q6ZPB5 146 aa7.62□□□□□ -1.19
HPS4-214ENST00000485842 CDKN2A-AS1Q9UH64 79 aa7.62□□□□□ -1.19
HPS4-214ENST00000485842 TINCRA0A1B0GVN0 87 aa7.61□□□□□ -1.19
HPS4-214ENST00000485842 Q6ZRU5 148 aa7.61□□□□□ -1.19
HPS4-214ENST00000485842 C2orf48Q96LS8 159 aa7.61□□□□□ -1.19
HPS4-214ENST00000485842 PACRGQ96M98 296 aaPredicted RBP7.61□□□□□ -1.19
HPS4-214ENST00000485842 TOMM7Q9P0U1 55 aa7.61□□□□□ -1.19
HPS4-214ENST00000485842 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.61□□□□□ -1.19
HPS4-214ENST00000485842 KIAA1109Q2LD37 5005 aa7.6□□□□□ -1.19
HPS4-214ENST00000485842 HIST1H2BKO60814 126 aa7.6□□□□□ -1.19
HPS4-214ENST00000485842 SMR3BP02814 79 aaPredicted RBP7.6□□□□□ -1.19
HPS4-214ENST00000485842 HIST1H2BJP06899 126 aa7.6□□□□□ -1.19
HPS4-214ENST00000485842 CHTF8P0CG12 524 aa7.6□□□□□ -1.19
HPS4-214ENST00000485842 HIST1H2BOP23527 126 aa7.6□□□□□ -1.19
HPS4-214ENST00000485842 HIST1H2BBP33778 126 aa7.6□□□□□ -1.19
HPS4-214ENST00000485842 HIST1H2BDP58876 126 aa7.6□□□□□ -1.19
HPS4-214ENST00000485842 HIST1H2BCP62807 126 aa7.6□□□□□ -1.19
HPS4-214ENST00000485842 HIST2H2BEQ16778 126 aa7.6□□□□□ -1.19
HPS4-214ENST00000485842 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.6□□□□□ -1.19
HPS4-214ENST00000485842 SCXQ7RTU7 201 aa7.6□□□□□ -1.19
HPS4-214ENST00000485842 LINC01561Q8N1V8 128 aa7.6□□□□□ -1.19
HPS4-214ENST00000485842 HIST1H2BHQ93079 126 aa7.6□□□□□ -1.19
HPS4-214ENST00000485842 HIST1H2BNQ99877 126 aa7.6□□□□□ -1.19
HPS4-214ENST00000485842 HIST1H2BMQ99879 126 aa7.6□□□□□ -1.19
HPS4-214ENST00000485842 CHAC1Q9BUX1 264 aa7.6□□□□□ -1.19
HPS4-214ENST00000485842 IGKV2-24A0A0C4DH68 120 aa7.59□□□□□ -1.19
HPS4-214ENST00000485842 PANO1I0J062 215 aa7.59□□□□□ -1.19
HPS4-214ENST00000485842 NDUFA1O15239 70 aa7.59□□□□□ -1.19
HPS4-214ENST00000485842 NUPR1O60356 82 aa7.59□□□□□ -1.19
HPS4-214ENST00000485842 IFI27L1Q96BM0 104 aa7.59□□□□□ -1.19
HPS4-214ENST00000485842 IGLV5-45A0A087WSX0 123 aa7.58□□□□□ -1.2
HPS4-214ENST00000485842 H0Y8G0 127 aa7.58□□□□□ -1.2
HPS4-214ENST00000485842 PRSS2P07478 247 aa7.58□□□□□ -1.2
HPS4-214ENST00000485842 SPINK8P0C7L1 97 aa7.58□□□□□ -1.2
HPS4-214ENST00000485842 IGLC3P0DOY3 106 aa7.58□□□□□ -1.2
HPS4-214ENST00000485842 Q8N1X5 172 aa7.58□□□□□ -1.2
HPS4-214ENST00000485842 DPH3Q96FX2 82 aa7.58□□□□□ -1.2
HPS4-214ENST00000485842 KRTAP17-1Q9BYP8 105 aa7.58□□□□□ -1.2
HPS4-214ENST00000485842 PKIGQ9Y2B9 76 aa7.58□□□□□ -1.2
HPS4-214ENST00000485842 A0A096LNI7 61 aa7.57□□□□□ -1.2
HPS4-214ENST00000485842 SMIM1B2RUZ4 78 aa7.57□□□□□ -1.2
HPS4-214ENST00000485842 LEPROTL1O95214 131 aa7.57□□□□□ -1.2
HPS4-214ENST00000485842 KIAA0087Q14695 138 aa7.57□□□□□ -1.2
HPS4-214ENST00000485842 C4orf48Q5BLP8 95 aa7.57□□□□□ -1.2
HPS4-214ENST00000485842 C10orf25Q5T742 122 aa7.57□□□□□ -1.2
HPS4-214ENST00000485842 C2orf82Q6UX34 121 aa7.57□□□□□ -1.2
HPS4-214ENST00000485842 UNQ6190/PRO20217Q6UXQ8 127 aa7.57□□□□□ -1.2
HPS4-214ENST00000485842 CIRBP-AS1Q8TBR5 109 aa7.57□□□□□ -1.2
HPS4-214ENST00000485842 CHTOPQ9Y3Y2 248 aaKnown RBP7.57□□□□□ -1.2
HPS4-214ENST00000485842 LOC107984640A0A0U1RRK4 108 aa7.56□□□□□ -1.2
HPS4-214ENST00000485842 C11orf86A6NJI1 115 aa7.56□□□□□ -1.2
HPS4-214ENST00000485842 F8WDY8 70 aa7.56□□□□□ -1.2
HPS4-214ENST00000485842 H3BRM9 83 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms