RNA–Protein interactions for RNA: ENST00000485810.1

PRPF38B-205, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 2

Gene PRPF38B, Length 1,352 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-205ENST00000485810 PRB3Q04118 309 aaPredicted RBP2.82□□□□□ -1.96
PRPF38B-205ENST00000485810 C5orf56Q8N8D9 126 aa2.82□□□□□ -1.96
PRPF38B-205ENST00000485810 Q8TAT8 98 aa2.82□□□□□ -1.96
PRPF38B-205ENST00000485810 CHCHD5Q9BSY4 110 aa2.82□□□□□ -1.96
PRPF38B-205ENST00000485810 CELA1Q9UNI1 258 aa2.82□□□□□ -1.96
PRPF38B-205ENST00000485810 FRYQ5TBA9 3013 aa2.81□□□□□ -1.96
PRPF38B-205ENST00000485810 MUC6Q6W4X9 2439 aa2.81□□□□□ -1.96
PRPF38B-205ENST00000485810 BAHCC1Q9P281 2608 aa2.81□□□□□ -1.96
PRPF38B-205ENST00000485810 IGLV8-61A0A075B6I0 122 aa2.81□□□□□ -1.96
PRPF38B-205ENST00000485810 TRBV25-1A0A075B6N4 114 aa2.81□□□□□ -1.96
PRPF38B-205ENST00000485810 IGKV2D-26A0A0A0MRZ7 120 aa2.81□□□□□ -1.96
PRPF38B-205ENST00000485810 TRAV21A0A0B4J279 112 aa2.81□□□□□ -1.96
PRPF38B-205ENST00000485810 F8VRH5 84 aa2.81□□□□□ -1.96
PRPF38B-205ENST00000485810 K7ERS5 55 aa2.81□□□□□ -1.96
PRPF38B-205ENST00000485810 NDUFA4O00483 81 aa2.81□□□□□ -1.96
PRPF38B-205ENST00000485810 PLNP26678 52 aa2.81□□□□□ -1.96
PRPF38B-205ENST00000485810 FXYD7P58549 80 aa2.81□□□□□ -1.96
PRPF38B-205ENST00000485810 SOSTDC1Q6X4U4 206 aa2.81□□□□□ -1.96
PRPF38B-205ENST00000485810 ATP11AUNQ6ZP68 121 aa2.81□□□□□ -1.96
PRPF38B-205ENST00000485810 Q8N2B8 174 aa2.81□□□□□ -1.96
PRPF38B-205ENST00000485810 ZFAND2AQ8N6M9 145 aa2.81□□□□□ -1.96
PRPF38B-205ENST00000485810 USMG5Q96IX5 58 aa2.81□□□□□ -1.96
PRPF38B-205ENST00000485810 SMIM2Q9BVW6 85 aa2.81□□□□□ -1.96
PRPF38B-205ENST00000485810 MRPL35Q9NZE8 188 aaKnown RBP2.81□□□□□ -1.96
PRPF38B-205ENST00000485810 S4R3C0 116 aa2.81□□□□□ -1.96
PRPF38B-205ENST00000485810 DSPP15924 2871 aaKnown RBP2.8□□□□□ -1.96
PRPF38B-205ENST00000485810 CACNA1BQ00975 2339 aa2.8□□□□□ -1.96
PRPF38B-205ENST00000485810 NBEAQ8NFP9 2946 aa2.8□□□□□ -1.96
PRPF38B-205ENST00000485810 TRBV7-3A0A075B6L6 115 aa2.8□□□□□ -1.96
PRPF38B-205ENST00000485810 TRAV2A0A0B4J234 112 aa2.8□□□□□ -1.96
PRPF38B-205ENST00000485810 A0A0J9YXY3 114 aa2.8□□□□□ -1.96
PRPF38B-205ENST00000485810 A0A1B0GUV1 79 aa2.8□□□□□ -1.96
PRPF38B-205ENST00000485810 A0A1W2PPR1 153 aa2.8□□□□□ -1.96
PRPF38B-205ENST00000485810 hADV29S1A0JD25 119 aa2.8□□□□□ -1.96
PRPF38B-205ENST00000485810 C3orf84H3BNL1 204 aa2.8□□□□□ -1.96
PRPF38B-205ENST00000485810 LY6HO94772 140 aa2.8□□□□□ -1.96
PRPF38B-205ENST00000485810 LY6G6DO95868 133 aa2.8□□□□□ -1.96
PRPF38B-205ENST00000485810 TRGV3P03979 118 aa2.8□□□□□ -1.96
PRPF38B-205ENST00000485810 FXYD2P54710 66 aa2.8□□□□□ -1.96
PRPF38B-205ENST00000485810 WFDC2Q14508 124 aa2.8□□□□□ -1.96
PRPF38B-205ENST00000485810 SS18Q15532 418 aa2.8□□□□□ -1.96
PRPF38B-205ENST00000485810 ASB16-AS1Q495Z4 193 aa2.8□□□□□ -1.96
PRPF38B-205ENST00000485810 ZC2HC1BQ5TFG8 222 aa2.8□□□□□ -1.96
PRPF38B-205ENST00000485810 KRTAP5-2Q701N4 177 aa2.8□□□□□ -1.96
PRPF38B-205ENST00000485810 FP248Q71RG6 208 aaPredicted RBP2.8□□□□□ -1.96
PRPF38B-205ENST00000485810 CAMK2N1Q7Z7J9 78 aa2.8□□□□□ -1.96
PRPF38B-205ENST00000485810 CEND1Q8N111 149 aa2.8□□□□□ -1.96
PRPF38B-205ENST00000485810 ODF3Q96PU9 254 aa2.8□□□□□ -1.96
PRPF38B-205ENST00000485810 CELSR3Q9NYQ7 3312 aa2.8□□□□□ -1.96
PRPF38B-205ENST00000485810 NOTCH3Q9UM47 2321 aa2.8□□□□□ -1.96
PRPF38B-205ENST00000485810 WDFY4Q6ZS81 3184 aa2.8□□□□□ -1.96
PRPF38B-205ENST00000485810 ZFHX2Q9C0A1 2572 aaPredicted RBP2.79□□□□□ -1.96
PRPF38B-205ENST00000485810 IGLV1-50A0A075B6I6 118 aa2.79□□□□□ -1.96
PRPF38B-205ENST00000485810 TRAV40A0A0B4J280 105 aa2.79□□□□□ -1.96
PRPF38B-205ENST00000485810 TRBV6-5A0A0K0K1A5 114 aa2.79□□□□□ -1.96
PRPF38B-205ENST00000485810 G3V318 75 aa2.79□□□□□ -1.96
PRPF38B-205ENST00000485810 IGHV3-23P01764 117 aa2.79□□□□□ -1.96
PRPF38B-205ENST00000485810 COX6B1P14854 86 aa2.79□□□□□ -1.96
PRPF38B-205ENST00000485810 LINC00315P59091 139 aa2.79□□□□□ -1.96
PRPF38B-205ENST00000485810 SPANXN1Q5VSR9 72 aa2.79□□□□□ -1.96
PRPF38B-205ENST00000485810 SERP2Q8N6R1 65 aa2.79□□□□□ -1.96
PRPF38B-205ENST00000485810 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.79□□□□□ -1.96
PRPF38B-205ENST00000485810 CLEC2BQ92478 149 aa2.79□□□□□ -1.96
PRPF38B-205ENST00000485810 DHRS4-AS1Q9P1J3 65 aa2.79□□□□□ -1.96
PRPF38B-205ENST00000485810 PHLDA3Q9Y5J5 127 aa2.79□□□□□ -1.96
PRPF38B-205ENST00000485810 TIMM8BQ9Y5J9 83 aaPredicted RBP2.79□□□□□ -1.96
PRPF38B-205ENST00000485810 KIF25-AS1Q9Y6Z4 181 aa2.79□□□□□ -1.96
PRPF38B-205ENST00000485810 LOC400499M0QZD8 3231 aa2.79□□□□□ -1.96
PRPF38B-205ENST00000485810 COL6A3P12111 3177 aa2.79□□□□□ -1.96
PRPF38B-205ENST00000485810 A0A087X002 238 aa2.78□□□□□ -1.96
PRPF38B-205ENST00000485810 MYMXA0A1B0GTQ4 84 aa2.78□□□□□ -1.96
PRPF38B-205ENST00000485810 A6NDX4 124 aa2.78□□□□□ -1.96
PRPF38B-205ENST00000485810 NDUFC1O43677 76 aa2.78□□□□□ -1.96
PRPF38B-205ENST00000485810 IGHV1-69P01742 117 aa2.78□□□□□ -1.96
PRPF38B-205ENST00000485810 RNASE3P12724 160 aaKnown RBP2.78□□□□□ -1.96
PRPF38B-205ENST00000485810 UBE2D1P51668 147 aa2.78□□□□□ -1.96
PRPF38B-205ENST00000485810 POLR2KP53803 58 aaKnown RBP2.78□□□□□ -1.96
PRPF38B-205ENST00000485810 PRR9Q5T870 116 aa2.78□□□□□ -1.96
PRPF38B-205ENST00000485810 SH2D6Q7Z4S9 175 aa2.78□□□□□ -1.96
PRPF38B-205ENST00000485810 TMEM141Q96I45 108 aa2.78□□□□□ -1.96
PRPF38B-205ENST00000485810 B9D2Q9BPU9 175 aa2.78□□□□□ -1.96
PRPF38B-205ENST00000485810 BPESC1Q9GZL8 116 aa2.78□□□□□ -1.96
PRPF38B-205ENST00000485810 ARHGAP32A7KAX9 2087 aa2.78□□□□□ -1.96
PRPF38B-205ENST00000485810 SMG1Q96Q15 3661 aaKnown RBP2.78□□□□□ -1.96
PRPF38B-205ENST00000485810 PIEZO2Q9H5I5 2752 aa2.77□□□□□ -1.97
PRPF38B-205ENST00000485810 IGHV3-35A0A0C4DH35 117 aa2.77□□□□□ -1.97
PRPF38B-205ENST00000485810 IGIPA6NJ69 53 aa2.77□□□□□ -1.97
PRPF38B-205ENST00000485810 KRTAP4-16G5E9R7 235 aaPredicted RBP2.77□□□□□ -1.97
PRPF38B-205ENST00000485810 H3BVH4 76 aa2.77□□□□□ -1.97
PRPF38B-205ENST00000485810 TSPEAR-AS2P59090 65 aa2.77□□□□□ -1.97
PRPF38B-205ENST00000485810 KRTAP10-12P60413 245 aa2.77□□□□□ -1.97
PRPF38B-205ENST00000485810 KRTAP24-1Q3LI83 254 aa2.77□□□□□ -1.97
PRPF38B-205ENST00000485810 C7orf33Q8WU49 177 aa2.77□□□□□ -1.97
PRPF38B-205ENST00000485810 LINC01600Q96MT4 127 aa2.77□□□□□ -1.97
PRPF38B-205ENST00000485810 NHP2Q9NX24 153 aaKnown RBP2.77□□□□□ -1.97
PRPF38B-205ENST00000485810 PRO0461Q9UI25 63 aa2.77□□□□□ -1.97
PRPF38B-205ENST00000485810 CEP295Q9C0D2 2601 aa2.77□□□□□ -1.97
PRPF38B-205ENST00000485810 SPTBN2O15020 2390 aa2.77□□□□□ -1.97
PRPF38B-205ENST00000485810 IGLV4-69A0A075B6H9 119 aa2.76□□□□□ -1.97
PRPF38B-205ENST00000485810 IGHV3OR16-8A0A075B7F1 116 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms