RNA–Protein interactions for RNA: ENST00000485645.5

SMC4-216, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-216ENST00000485645 TMEM18Q96B42 140 aa10.68□□□□□ -0.7
SMC4-216ENST00000485645 GAGE2BQ13066 116 aa10.67□□□□□ -0.7
SMC4-216ENST00000485645 Q6ZRP5 223 aa10.67□□□□□ -0.7
SMC4-216ENST00000485645 CAMK2N2Q96S95 79 aa10.67□□□□□ -0.7
SMC4-216ENST00000485645 IMMP2LQ96T52 175 aa10.67□□□□□ -0.7
SMC4-216ENST00000485645 Q6ZUT4 128 aa10.66□□□□□ -0.7
SMC4-216ENST00000485645 ORMDL3Q8N138 153 aa10.66□□□□□ -0.7
SMC4-216ENST00000485645 TIMM21Q9BVV7 248 aa10.66□□□□□ -0.7
SMC4-216ENST00000485645 CTDSP1Q9GZU7 261 aa10.66□□□□□ -0.7
SMC4-216ENST00000485645 TCAPO15273 167 aa10.65□□□□□ -0.7
SMC4-216ENST00000485645 APOMO95445 188 aa10.65□□□□□ -0.7
SMC4-216ENST00000485645 NPYP01303 97 aa10.65□□□□□ -0.7
SMC4-216ENST00000485645 REG3GQ6UW15 175 aa10.65□□□□□ -0.7
SMC4-216ENST00000485645 C5orf38Q86SI9 138 aa10.65□□□□□ -0.7
SMC4-216ENST00000485645 C2orf48Q96LS8 159 aa10.65□□□□□ -0.7
SMC4-216ENST00000485645 SMIM2Q9BVW6 85 aa10.65□□□□□ -0.7
SMC4-216ENST00000485645 C10orf91Q5T1B1 145 aa10.64□□□□□ -0.71
SMC4-216ENST00000485645 TMEM136Q6ZRR5 245 aa10.64□□□□□ -0.71
SMC4-216ENST00000485645 PRELID3AQ96N28 172 aa10.64□□□□□ -0.71
SMC4-216ENST00000485645 A0A0J9YXV3 536 aa10.63□□□□□ -0.71
SMC4-216ENST00000485645 SRSF9Q13242 221 aaKnown RBP eCLIP10.63□□□□□ -0.71
SMC4-216ENST00000485645 A0A1W2PNN7 141 aa10.62□□□□□ -0.71
SMC4-216ENST00000485645 LAMTOR2Q9Y2Q5 125 aa10.62□□□□□ -0.71
SMC4-216ENST00000485645 TRAV9-1A0A075B6T8 112 aa10.61□□□□□ -0.71
SMC4-216ENST00000485645 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.61□□□□□ -0.71
SMC4-216ENST00000485645 RPL39P62891 51 aaKnown RBP10.61□□□□□ -0.71
SMC4-216ENST00000485645 SPAG11BQ08648 103 aa10.61□□□□□ -0.71
SMC4-216ENST00000485645 CARHSP1Q9Y2V2 147 aaKnown RBP10.61□□□□□ -0.71
SMC4-216ENST00000485645 PRSS47A8MTI9 375 aa10.6□□□□□ -0.71
SMC4-216ENST00000485645 RPL18AQ02543 176 aaKnown RBP10.6□□□□□ -0.71
SMC4-216ENST00000485645 C9orf116Q5BN46 136 aaPredicted RBP10.6□□□□□ -0.71
SMC4-216ENST00000485645 OR10D4PQ8NGN7 298 aa10.6□□□□□ -0.71
SMC4-216ENST00000485645 KRTAP10-8P60410 259 aa10.59□□□□□ -0.71
SMC4-216ENST00000485645 RNF151Q2KHN1 245 aa10.59□□□□□ -0.71
SMC4-216ENST00000485645 OPRPNQ99935 248 aaPredicted RBP10.59□□□□□ -0.71
SMC4-216ENST00000485645 SPANXA1Q9NS26 97 aa10.59□□□□□ -0.71
SMC4-216ENST00000485645 S100PP25815 95 aa10.58□□□□□ -0.72
SMC4-216ENST00000485645 ODF1Q14990 250 aa10.58□□□□□ -0.72
SMC4-216ENST00000485645 RHEBQ15382 184 aa10.58□□□□□ -0.72
SMC4-216ENST00000485645 MAP1LC3AQ9H492 121 aa10.58□□□□□ -0.72
SMC4-216ENST00000485645 LRP2P98164 4655 aa10.58□□□□□ -0.72
SMC4-216ENST00000485645 RAB5AP20339 215 aa10.57□□□□□ -0.72
SMC4-216ENST00000485645 MRPS36P82909 103 aaKnown RBP10.57□□□□□ -0.72
SMC4-216ENST00000485645 ORAOV1Q8WV07 137 aa10.57□□□□□ -0.72
SMC4-216ENST00000485645 FAM104AQ969W3 186 aa10.57□□□□□ -0.72
SMC4-216ENST00000485645 IGHV3OR16-9A0A0B4J2B5 98 aa10.56□□□□□ -0.72
SMC4-216ENST00000485645 F8WDY8 70 aa10.56□□□□□ -0.72
SMC4-216ENST00000485645 MT-ND6P03923 174 aa10.56□□□□□ -0.72
SMC4-216ENST00000485645 MRPL35Q9NZE8 188 aaKnown RBP10.56□□□□□ -0.72
SMC4-216ENST00000485645 PSORS1C2Q9UIG4 136 aa10.56□□□□□ -0.72
SMC4-216ENST00000485645 LOC389332A0A1B0GUA5 103 aa10.55□□□□□ -0.72
SMC4-216ENST00000485645 IFITM10A6NMD0 228 aa10.55□□□□□ -0.72
SMC4-216ENST00000485645 RPS10P5Q9NQ39 176 aa10.55□□□□□ -0.72
SMC4-216ENST00000485645 NDUFA1O15239 70 aa10.54□□□□□ -0.72
SMC4-216ENST00000485645 PHF5AQ7RTV0 110 aaKnown RBP10.54□□□□□ -0.72
SMC4-216ENST00000485645 Q8N8P6 123 aa10.54□□□□□ -0.72
SMC4-216ENST00000485645 C1orf137Q5JT78 98 aa10.53□□□□□ -0.72
SMC4-216ENST00000485645 GNB1LQ9BYB4 327 aa10.53□□□□□ -0.72
SMC4-216ENST00000485645 IFI27P40305 119 aaPredicted RBP10.52□□□□□ -0.73
SMC4-216ENST00000485645 COX19Q49B96 90 aa10.52□□□□□ -0.73
SMC4-216ENST00000485645 TGIF2-C20orf24A0A0A6YYL0 155 aa10.51□□□□□ -0.73
SMC4-216ENST00000485645 K7EMI3 77 aa10.51□□□□□ -0.73
SMC4-216ENST00000485645 APOC3P02656 99 aa10.51□□□□□ -0.73
SMC4-216ENST00000485645 NDUFA5Q16718 116 aa10.51□□□□□ -0.73
SMC4-216ENST00000485645 KIAA1644Q3SXP7 199 aa10.51□□□□□ -0.73
SMC4-216ENST00000485645 C10orf25Q5T742 122 aa10.51□□□□□ -0.73
SMC4-216ENST00000485645 UNQ6190/PRO20217Q6UXQ8 127 aa10.51□□□□□ -0.73
SMC4-216ENST00000485645 NXT2Q9NPJ8 142 aaKnown RBP10.51□□□□□ -0.73
SMC4-216ENST00000485645 PYGO1Q9Y3Y4 419 aa10.51□□□□□ -0.73
SMC4-216ENST00000485645 TLX1NBP0CAT3 122 aa10.5□□□□□ -0.73
SMC4-216ENST00000485645 SVBPQ8N300 66 aa10.5□□□□□ -0.73
SMC4-216ENST00000485645 RNF213Q63HN8 5207 aa10.5□□□□□ -0.73
SMC4-216ENST00000485645 A0A087WZ39 114 aa10.49□□□□□ -0.73
SMC4-216ENST00000485645 ORMDL2Q53FV1 153 aa10.49□□□□□ -0.73
SMC4-216ENST00000485645 C6orf48Q9UBA6 75 aa10.49□□□□□ -0.73
SMC4-216ENST00000485645 IGLV4-3A0A075B6K6 122 aa10.48□□□□□ -0.73
SMC4-216ENST00000485645 FAM168BA1KXE4 195 aa10.48□□□□□ -0.73
SMC4-216ENST00000485645 SNAPINO95295 136 aa10.48□□□□□ -0.73
SMC4-216ENST00000485645 TMEM141Q96I45 108 aa10.48□□□□□ -0.73
SMC4-216ENST00000485645 CYSLTR1Q9Y271 337 aa10.48□□□□□ -0.73
SMC4-216ENST00000485645 GAGE2EQ4V326 116 aa10.47□□□□□ -0.73
SMC4-216ENST00000485645 LINC00242Q5T6M2 205 aa10.47□□□□□ -0.73
SMC4-216ENST00000485645 C2orf66Q6UXQ4 117 aa10.47□□□□□ -0.73
SMC4-216ENST00000485645 GAGE2DQ9UEU5 116 aa10.47□□□□□ -0.73
SMC4-216ENST00000485645 IGLV7-43P04211 117 aa10.46□□□□□ -0.73
SMC4-216ENST00000485645 KIAA0087Q14695 138 aa10.46□□□□□ -0.73
SMC4-216ENST00000485645 TEX43Q6ZNM6 134 aa10.46□□□□□ -0.73
SMC4-216ENST00000485645 FAM19A5Q7Z5A7 132 aaPredicted RBP10.46□□□□□ -0.73
SMC4-216ENST00000485645 ALKBH7Q9BT30 221 aaPredicted RBP10.46□□□□□ -0.73
SMC4-216ENST00000485645 MRPL18Q9H0U6 180 aaKnown RBP10.46□□□□□ -0.73
SMC4-216ENST00000485645 G0S2P27469 103 aa10.45□□□□□ -0.74
SMC4-216ENST00000485645 FABP9Q0Z7S8 132 aa10.45□□□□□ -0.74
SMC4-216ENST00000485645 DIRC1Q969H9 104 aa10.45□□□□□ -0.74
SMC4-216ENST00000485645 TRBV30A0A0K0K1B3 111 aa10.44□□□□□ -0.74
SMC4-216ENST00000485645 NPSP0C0P6 89 aa10.44□□□□□ -0.74
SMC4-216ENST00000485645 C2orf88Q9BSF0 95 aa10.44□□□□□ -0.74
SMC4-216ENST00000485645 IGIPA6NJ69 53 aa10.43□□□□□ -0.74
SMC4-216ENST00000485645 UBE2D1P51668 147 aa10.43□□□□□ -0.74
SMC4-216ENST00000485645 KRTAP11-1Q8IUC1 163 aa10.43□□□□□ -0.74
SMC4-216ENST00000485645 LINC01561Q8N1V8 128 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms