RNA–Protein interactions for RNA: ENST00000485303.5

NECTIN3-206, Transcript of nectin cell adhesion molecule 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NECTIN3, Length 3,664 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-206ENST00000485303 KLK12Q9UKR0 248 aa12.88□□□□□ -0.35
NECTIN3-206ENST00000485303 MRPL52Q86TS9 123 aaKnown RBP12.87□□□□□ -0.35
NECTIN3-206ENST00000485303 TM2D3Q9BRN9 247 aa12.87□□□□□ -0.35
NECTIN3-206ENST00000485303 MYMXA0A1B0GTQ4 84 aa12.87□□□□□ -0.35
NECTIN3-206ENST00000485303 HERVK_113P63121 156 aa12.86□□□□□ -0.35
NECTIN3-206ENST00000485303 MRPS36P82909 103 aaKnown RBP12.86□□□□□ -0.35
NECTIN3-206ENST00000485303 FAM104AQ969W3 186 aa12.86□□□□□ -0.35
NECTIN3-206ENST00000485303 LINC00242Q5T6M2 205 aa12.86□□□□□ -0.35
NECTIN3-206ENST00000485303 NFE4Q86UQ8 179 aa12.86□□□□□ -0.35
NECTIN3-206ENST00000485303 SEC11AP67812 179 aa12.85□□□□□ -0.35
NECTIN3-206ENST00000485303 TINCRA0A1B0GVN0 87 aa12.85□□□□□ -0.35
NECTIN3-206ENST00000485303 SS18Q15532 418 aa12.85□□□□□ -0.35
NECTIN3-206ENST00000485303 UBE2WQ96B02 151 aa12.85□□□□□ -0.35
NECTIN3-206ENST00000485303 TMEM223A0PJW6 202 aa12.84□□□□□ -0.35
NECTIN3-206ENST00000485303 K7ERU9 68 aa12.84□□□□□ -0.35
NECTIN3-206ENST00000485303 TSPEAR-AS2P59090 65 aa12.84□□□□□ -0.35
NECTIN3-206ENST00000485303 TRAV10A0A0B4J240 114 aa12.84□□□□□ -0.35
NECTIN3-206ENST00000485303 BVES-AS1Q5T3Y7 98 aa12.84□□□□□ -0.35
NECTIN3-206ENST00000485303 SH2D6Q7Z4S9 175 aa12.84□□□□□ -0.35
NECTIN3-206ENST00000485303 CRPP02741 224 aa12.84□□□□□ -0.35
NECTIN3-206ENST00000485303 PRSS2P07478 247 aa12.84□□□□□ -0.35
NECTIN3-206ENST00000485303 C2orf91Q6ZV80 131 aa12.84□□□□□ -0.35
NECTIN3-206ENST00000485303 PLEKHB2Q96CS7 222 aa12.84□□□□□ -0.35
NECTIN3-206ENST00000485303 NPC2P61916 151 aa12.83□□□□□ -0.36
NECTIN3-206ENST00000485303 LELP1Q5T871 98 aa12.83□□□□□ -0.36
NECTIN3-206ENST00000485303 LYPD5Q6UWN5 251 aa12.83□□□□□ -0.36
NECTIN3-206ENST00000485303 H7C423 109 aa12.83□□□□□ -0.36
NECTIN3-206ENST00000485303 WFDC10BQ8IUB3 73 aa12.82□□□□□ -0.36
NECTIN3-206ENST00000485303 NDUFA12Q9UI09 145 aa12.82□□□□□ -0.36
NECTIN3-206ENST00000485303 CSDC2Q9Y534 153 aaKnown RBP12.82□□□□□ -0.36
NECTIN3-206ENST00000485303 LEPROTO15243 131 aa12.81□□□□□ -0.36
NECTIN3-206ENST00000485303 OCIAD2Q56VL3 154 aa12.81□□□□□ -0.36
NECTIN3-206ENST00000485303 REG3AQ06141 175 aa12.81□□□□□ -0.36
NECTIN3-206ENST00000485303 TAX1BP3O14907 124 aa12.8□□□□□ -0.36
NECTIN3-206ENST00000485303 MEIG1Q5JSS6 88 aa12.8□□□□□ -0.36
NECTIN3-206ENST00000485303 K7EP13 123 aa12.8□□□□□ -0.36
NECTIN3-206ENST00000485303 MALP21145 153 aa12.8□□□□□ -0.36
NECTIN3-206ENST00000485303 HSD52Q0P140 79 aa12.8□□□□□ -0.36
NECTIN3-206ENST00000485303 IGHV1-58A0A0C4DH39 117 aa12.79□□□□□ -0.36
NECTIN3-206ENST00000485303 LINC00959A0A1B0GUT2 108 aa12.79□□□□□ -0.36
NECTIN3-206ENST00000485303 GTF2H5Q6ZYL4 71 aa12.79□□□□□ -0.36
NECTIN3-206ENST00000485303 A6NDN8 102 aa12.79□□□□□ -0.36
NECTIN3-206ENST00000485303 Q9HAA7 133 aa12.79□□□□□ -0.36
NECTIN3-206ENST00000485303 ESRGQ1W209 222 aa12.78□□□□□ -0.36
NECTIN3-206ENST00000485303 ANK2Q01484 3957 aa12.78□□□□□ -0.36
NECTIN3-206ENST00000485303 NHP2Q9NX24 153 aaKnown RBP12.77□□□□□ -0.37
NECTIN3-206ENST00000485303 TIRAPP58753 221 aa12.77□□□□□ -0.37
NECTIN3-206ENST00000485303 B9D2Q9BPU9 175 aa12.77□□□□□ -0.37
NECTIN3-206ENST00000485303 Q9H8V8 135 aa12.77□□□□□ -0.37
NECTIN3-206ENST00000485303 CMYA5Q8N3K9 4069 aa12.76□□□□□ -0.37
NECTIN3-206ENST00000485303 SFTA2Q6UW10 78 aa12.76□□□□□ -0.37
NECTIN3-206ENST00000485303 MTURNQ8N3F0 131 aa12.76□□□□□ -0.37
NECTIN3-206ENST00000485303 SPCS1Q9Y6A9 102 aa12.75□□□□□ -0.37
NECTIN3-206ENST00000485303 UBE2DNLQ8IWF7 75 aa12.75□□□□□ -0.37
NECTIN3-206ENST00000485303 DAND5Q8N907 189 aa12.75□□□□□ -0.37
NECTIN3-206ENST00000485303 CHCHD10Q8WYQ3 142 aaPredicted RBP12.75□□□□□ -0.37
NECTIN3-206ENST00000485303 C6orf226Q5I0X4 101 aa12.75□□□□□ -0.37
NECTIN3-206ENST00000485303 CCL18P55774 89 aa12.74□□□□□ -0.37
NECTIN3-206ENST00000485303 APOMO95445 188 aa12.74□□□□□ -0.37
NECTIN3-206ENST00000485303 FXYD2P54710 66 aa12.74□□□□□ -0.37
NECTIN3-206ENST00000485303 SIVA1O15304 175 aa12.73□□□□□ -0.37
NECTIN3-206ENST00000485303 A0A1B0GUV1 79 aa12.73□□□□□ -0.37
NECTIN3-206ENST00000485303 SMIM1B2RUZ4 78 aa12.72□□□□□ -0.37
NECTIN3-206ENST00000485303 K7ERJ3 54 aa12.72□□□□□ -0.37
NECTIN3-206ENST00000485303 SVIPQ8NHG7 77 aa12.72□□□□□ -0.37
NECTIN3-206ENST00000485303 GAGE12HA6NDE8 117 aa12.71□□□□□ -0.37
NECTIN3-206ENST00000485303 FABP2P12104 132 aa12.71□□□□□ -0.37
NECTIN3-206ENST00000485303 IGKV2D-24A0A075B6R9 120 aa12.71□□□□□ -0.38
NECTIN3-206ENST00000485303 LINC00526Q96FQ7 95 aa12.7□□□□□ -0.38
NECTIN3-206ENST00000485303 H7C2G1 150 aa12.7□□□□□ -0.38
NECTIN3-206ENST00000485303 COX7A2LO14548 114 aa12.7□□□□□ -0.38
NECTIN3-206ENST00000485303 C10orf126Q8N4M7 172 aa12.7□□□□□ -0.38
NECTIN3-206ENST00000485303 PFN2P35080 140 aa12.69□□□□□ -0.38
NECTIN3-206ENST00000485303 CFAP161Q6P656 301 aa12.69□□□□□ -0.38
NECTIN3-206ENST00000485303 CEND1Q8N111 149 aa12.69□□□□□ -0.38
NECTIN3-206ENST00000485303 A0A0J9YXY3 114 aa12.69□□□□□ -0.38
NECTIN3-206ENST00000485303 CIRBPQ14011 172 aaKnown RBP12.69□□□□□ -0.38
NECTIN3-206ENST00000485303 COX7B2Q8TF08 81 aa12.69□□□□□ -0.38
NECTIN3-206ENST00000485303 HIGD1BQ9P298 99 aa12.69□□□□□ -0.38
NECTIN3-206ENST00000485303 C15orf53Q8NAA6 179 aa12.69□□□□□ -0.38
NECTIN3-206ENST00000485303 H3BNG1 76 aa12.68□□□□□ -0.38
NECTIN3-206ENST00000485303 CKS1BP61024 79 aa12.68□□□□□ -0.38
NECTIN3-206ENST00000485303 ZFAND6Q6FIF0 208 aa12.68□□□□□ -0.38
NECTIN3-206ENST00000485303 LINC00158P58513 81 aa12.67□□□□□ -0.38
NECTIN3-206ENST00000485303 IGHV3OR16-9A0A0B4J2B5 98 aa12.66□□□□□ -0.38
NECTIN3-206ENST00000485303 SMIM13P0DJ93 91 aa12.66□□□□□ -0.38
NECTIN3-206ENST00000485303 C1orf43Q9BWL3 253 aa12.65□□□□□ -0.38
NECTIN3-206ENST00000485303 C2orf82Q6UX34 121 aa12.65□□□□□ -0.38
NECTIN3-206ENST00000485303 IGLV5-45A0A087WSX0 123 aa12.65□□□□□ -0.39
NECTIN3-206ENST00000485303 CD164L2Q6UWJ8 174 aa12.64□□□□□ -0.39
NECTIN3-206ENST00000485303 TMEM238LA0A1B0GVL6 79 aa12.64□□□□□ -0.39
NECTIN3-206ENST00000485303 A6NJY4 79 aa12.64□□□□□ -0.39
NECTIN3-206ENST00000485303 LINC00588Q9Y4M8 146 aa12.64□□□□□ -0.39
NECTIN3-206ENST00000485303 DNHD1Q96M86 4753 aa12.64□□□□□ -0.39
NECTIN3-206ENST00000485303 Q1RN00 199 aa12.63□□□□□ -0.39
NECTIN3-206ENST00000485303 A0A087WZ39 114 aa12.63□□□□□ -0.39
NECTIN3-206ENST00000485303 MUSTN1Q8IVN3 82 aa12.63□□□□□ -0.39
NECTIN3-206ENST00000485303 HIGD2BQ4VC39 106 aa12.62□□□□□ -0.39
NECTIN3-206ENST00000485303 ENHOQ6UWT2 76 aa12.62□□□□□ -0.39
NECTIN3-206ENST00000485303 C9orf118A6NHY6 69 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 107.5 ms