RNA–Protein interactions for RNA: ENST00000484704.5

HLA-F-226, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 1,201 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-226ENST00000484704 NXT2Q9NPJ8 142 aaKnown RBP9.6□□□□□ -0.87
HLA-F-226ENST00000484704 A0A087WYN8 130 aa9.59□□□□□ -0.87
HLA-F-226ENST00000484704 TGIF2-C20orf24A0A0A6YYL0 155 aa9.59□□□□□ -0.87
HLA-F-226ENST00000484704 KIAA1644Q3SXP7 199 aa9.59□□□□□ -0.87
HLA-F-226ENST00000484704 TEX43Q6ZNM6 134 aa9.59□□□□□ -0.87
HLA-F-226ENST00000484704 PRSS3P2Q8NHM4 247 aa9.59□□□□□ -0.87
HLA-F-226ENST00000484704 SPACA4Q8TDM5 124 aa9.59□□□□□ -0.87
HLA-F-226ENST00000484704 C2orf88Q9BSF0 95 aa9.59□□□□□ -0.87
HLA-F-226ENST00000484704 IGLV4-69A0A075B6H9 119 aa9.58□□□□□ -0.88
HLA-F-226ENST00000484704 G0S2P27469 103 aa9.58□□□□□ -0.88
HLA-F-226ENST00000484704 SPAG11BQ08648 103 aa9.58□□□□□ -0.88
HLA-F-226ENST00000484704 CIRBPQ14011 172 aaKnown RBP9.58□□□□□ -0.88
HLA-F-226ENST00000484704 RHEBQ15382 184 aa9.58□□□□□ -0.88
HLA-F-226ENST00000484704 C2orf66Q6UXQ4 117 aa9.58□□□□□ -0.88
HLA-F-226ENST00000484704 TMEM141Q96I45 108 aa9.58□□□□□ -0.88
HLA-F-226ENST00000484704 PYGO1Q9Y3Y4 419 aa9.58□□□□□ -0.88
HLA-F-226ENST00000484704 K7EMI3 77 aa9.57□□□□□ -0.88
HLA-F-226ENST00000484704 COX19Q49B96 90 aa9.57□□□□□ -0.88
HLA-F-226ENST00000484704 ORAOV1Q8WV07 137 aa9.57□□□□□ -0.88
HLA-F-226ENST00000484704 LINC00474Q9P2X8 69 aa9.57□□□□□ -0.88
HLA-F-226ENST00000484704 IGLV4-3A0A075B6K6 122 aa9.56□□□□□ -0.88
HLA-F-226ENST00000484704 NDUFA5Q16718 116 aa9.56□□□□□ -0.88
HLA-F-226ENST00000484704 OR10D4PQ8NGN7 298 aa9.56□□□□□ -0.88
HLA-F-226ENST00000484704 C7orf33Q8WU49 177 aa9.56□□□□□ -0.88
HLA-F-226ENST00000484704 GNB1LQ9BYB4 327 aa9.56□□□□□ -0.88
HLA-F-226ENST00000484704 VCX2Q9H322 139 aa9.56□□□□□ -0.88
HLA-F-226ENST00000484704 CARHSP1Q9Y2V2 147 aaKnown RBP9.56□□□□□ -0.88
HLA-F-226ENST00000484704 A0A096LNI7 61 aa9.55□□□□□ -0.88
HLA-F-226ENST00000484704 STPG4Q8N801 248 aa9.55□□□□□ -0.88
HLA-F-226ENST00000484704 C2orf48Q96LS8 159 aa9.55□□□□□ -0.88
HLA-F-226ENST00000484704 LOC107984640A0A0U1RRK4 108 aa9.54□□□□□ -0.88
HLA-F-226ENST00000484704 APOC3P02656 99 aa9.54□□□□□ -0.88
HLA-F-226ENST00000484704 MT-ND6P03923 174 aa9.54□□□□□ -0.88
HLA-F-226ENST00000484704 FABP9Q0Z7S8 132 aa9.54□□□□□ -0.88
HLA-F-226ENST00000484704 GAGE2BQ13066 116 aa9.54□□□□□ -0.88
HLA-F-226ENST00000484704 PAPPA-AS1Q5QFB9 102 aa9.54□□□□□ -0.88
HLA-F-226ENST00000484704 C10orf91Q5T1B1 145 aa9.54□□□□□ -0.88
HLA-F-226ENST00000484704 Q6ZRU5 148 aa9.54□□□□□ -0.88
HLA-F-226ENST00000484704 IGHV3OR16-9A0A0B4J2B5 98 aa9.53□□□□□ -0.88
HLA-F-226ENST00000484704 FAM104AQ969W3 186 aa9.53□□□□□ -0.88
HLA-F-226ENST00000484704 MRPL18Q9H0U6 180 aaKnown RBP9.53□□□□□ -0.88
HLA-F-226ENST00000484704 PLAC8Q9NZF1 115 aa9.53□□□□□ -0.88
HLA-F-226ENST00000484704 RPL18AQ02543 176 aaKnown RBP9.52□□□□□ -0.89
HLA-F-226ENST00000484704 SMCO4Q9NRQ5 59 aa9.52□□□□□ -0.89
HLA-F-226ENST00000484704 NDUFA1O15239 70 aa9.51□□□□□ -0.89
HLA-F-226ENST00000484704 LINC00242Q5T6M2 205 aa9.51□□□□□ -0.89
HLA-F-226ENST00000484704 SERTAD4-AS1Q5TG53 156 aa9.51□□□□□ -0.89
HLA-F-226ENST00000484704 FA2HQ7L5A8 372 aa9.51□□□□□ -0.89
HLA-F-226ENST00000484704 F8WDY8 70 aa9.5□□□□□ -0.89
HLA-F-226ENST00000484704 SNAPINO95295 136 aa9.5□□□□□ -0.89
HLA-F-226ENST00000484704 NPSP0C0P6 89 aa9.5□□□□□ -0.89
HLA-F-226ENST00000484704 UBE2D1P51668 147 aa9.5□□□□□ -0.89
HLA-F-226ENST00000484704 PTTG1IPP53801 180 aa9.5□□□□□ -0.89
HLA-F-226ENST00000484704 ZC2HC1BQ5TFG8 222 aa9.5□□□□□ -0.89
HLA-F-226ENST00000484704 SVBPQ8N300 66 aa9.5□□□□□ -0.89
HLA-F-226ENST00000484704 SCGB3A1Q96QR1 104 aa9.5□□□□□ -0.89
HLA-F-226ENST00000484704 ALKBH7Q9BT30 221 aaPredicted RBP9.5□□□□□ -0.89
HLA-F-226ENST00000484704 A0A087WZ39 114 aa9.49□□□□□ -0.89
HLA-F-226ENST00000484704 A0A0J9YXV3 536 aa9.49□□□□□ -0.89
HLA-F-226ENST00000484704 LINC01549A6NIU2 74 aa9.49□□□□□ -0.89
HLA-F-226ENST00000484704 PRSS2P07478 247 aa9.49□□□□□ -0.89
HLA-F-226ENST00000484704 KRTAP10-4P60372 401 aaPredicted RBP9.49□□□□□ -0.89
HLA-F-226ENST00000484704 TOMM6Q96B49 74 aa9.49□□□□□ -0.89
HLA-F-226ENST00000484704 TRAPPC1Q9Y5R8 145 aa9.49□□□□□ -0.89
HLA-F-226ENST00000484704 LRP1Q07954 4544 aaKnown RBP9.48□□□□□ -0.89
HLA-F-226ENST00000484704 SEC11AP67812 179 aa9.48□□□□□ -0.89
HLA-F-226ENST00000484704 PACRGQ96M98 296 aaPredicted RBP9.48□□□□□ -0.89
HLA-F-226ENST00000484704 AMELXQ99217 191 aa9.48□□□□□ -0.89
HLA-F-226ENST00000484704 TIMM17AQ99595 171 aa9.48□□□□□ -0.89
HLA-F-226ENST00000484704 GEMIN7Q9H840 131 aaKnown RBP9.48□□□□□ -0.89
HLA-F-226ENST00000484704 MRPL35Q9NZE8 188 aaKnown RBP9.48□□□□□ -0.89
HLA-F-226ENST00000484704 UBR4Q5T4S7 5183 aa9.47□□□□□ -0.89
HLA-F-226ENST00000484704 IGIPA6NJ69 53 aa9.47□□□□□ -0.89
HLA-F-226ENST00000484704 HERVK_113P63121 156 aa9.47□□□□□ -0.89
HLA-F-226ENST00000484704 RNF151Q2KHN1 245 aa9.47□□□□□ -0.89
HLA-F-226ENST00000484704 TOMM7Q9P0U1 55 aa9.47□□□□□ -0.89
HLA-F-226ENST00000484704 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.46□□□□□ -0.9
HLA-F-226ENST00000484704 LINC00173Q6ZV60 143 aa9.46□□□□□ -0.9
HLA-F-226ENST00000484704 ERASQ7Z444 233 aa9.46□□□□□ -0.9
HLA-F-226ENST00000484704 LINC01561Q8N1V8 128 aa9.46□□□□□ -0.9
HLA-F-226ENST00000484704 HMCN2Q8NDA2 5059 aa9.46□□□□□ -0.9
HLA-F-226ENST00000484704 UNQ6190/PRO20217Q6UXQ8 127 aa9.45□□□□□ -0.9
HLA-F-226ENST00000484704 PLA2G2DQ9UNK4 145 aa9.45□□□□□ -0.9
HLA-F-226ENST00000484704 CKS1BP61024 79 aa9.44□□□□□ -0.9
HLA-F-226ENST00000484704 C6orf226Q5I0X4 101 aa9.44□□□□□ -0.9
HLA-F-226ENST00000484704 OXTP01178 125 aa9.43□□□□□ -0.9
HLA-F-226ENST00000484704 HNRNPA3P51991 378 aaKnown RBP9.43□□□□□ -0.9
HLA-F-226ENST00000484704 C9orf116Q5BN46 136 aaPredicted RBP9.43□□□□□ -0.9
HLA-F-226ENST00000484704 C10orf25Q5T742 122 aa9.43□□□□□ -0.9
HLA-F-226ENST00000484704 C6orf48Q9UBA6 75 aa9.43□□□□□ -0.9
HLA-F-226ENST00000484704 TRBV30A0A0K0K1B3 111 aa9.42□□□□□ -0.9
HLA-F-226ENST00000484704 GAGE2EQ4V326 116 aa9.42□□□□□ -0.9
HLA-F-226ENST00000484704 C2orf82Q6UX34 121 aa9.42□□□□□ -0.9
HLA-F-226ENST00000484704 LINC00469Q8N7U9 141 aa9.42□□□□□ -0.9
HLA-F-226ENST00000484704 GAGE2DQ9UEU5 116 aa9.42□□□□□ -0.9
HLA-F-226ENST00000484704 LINC01546A6NGU7 62 aa9.41□□□□□ -0.9
HLA-F-226ENST00000484704 NDUFA6P56556 154 aa9.41□□□□□ -0.9
HLA-F-226ENST00000484704 PRR3P79522 188 aaKnown RBP9.41□□□□□ -0.9
HLA-F-226ENST00000484704 KIAA0087Q14695 138 aa9.41□□□□□ -0.9
HLA-F-226ENST00000484704 FAM19A3Q7Z5A8 133 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms