RNA–Protein interactions for RNA: ENST00000484235.1

SMDT1-203, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

TSL 1 (best)

Gene SMDT1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-203ENST00000484235 C5orf38Q86SI9 138 aa17.18■□□□□ 0.34
SMDT1-203ENST00000484235 IGHV3OR16-9A0A0B4J2B5 98 aa17.17■□□□□ 0.34
SMDT1-203ENST00000484235 CBLN2Q8IUK8 224 aa17.17■□□□□ 0.34
SMDT1-203ENST00000484235 C2orf88Q9BSF0 95 aa17.17■□□□□ 0.34
SMDT1-203ENST00000484235 IGHV3-64A0A075B6Q5 118 aa17.16■□□□□ 0.34
SMDT1-203ENST00000484235 LINC01549A6NIU2 74 aa17.16■□□□□ 0.34
SMDT1-203ENST00000484235 ZNF561-AS1K7EIQ3 104 aa17.16■□□□□ 0.34
SMDT1-203ENST00000484235 PAPPA-AS1Q5QFB9 102 aa17.16■□□□□ 0.34
SMDT1-203ENST00000484235 AMELXQ99217 191 aa17.16■□□□□ 0.34
SMDT1-203ENST00000484235 TIMM17AQ99595 171 aa17.16■□□□□ 0.34
SMDT1-203ENST00000484235 CHAC1Q9BUX1 264 aa17.16■□□□□ 0.34
SMDT1-203ENST00000484235 FAT1Q14517 4588 aa17.15■□□□□ 0.34
SMDT1-203ENST00000484235 APOMO95445 188 aa17.15■□□□□ 0.34
SMDT1-203ENST00000484235 ERASQ7Z444 233 aa17.15■□□□□ 0.34
SMDT1-203ENST00000484235 C18orf32Q8TCD1 76 aa17.15■□□□□ 0.34
SMDT1-203ENST00000484235 SCGB3A1Q96QR1 104 aa17.14■□□□□ 0.33
SMDT1-203ENST00000484235 SMR3BP02814 79 aaPredicted RBP17.13■□□□□ 0.33
SMDT1-203ENST00000484235 UBE2D1P51668 147 aa17.13■□□□□ 0.33
SMDT1-203ENST00000484235 LINC00242Q5T6M2 205 aa17.13■□□□□ 0.33
SMDT1-203ENST00000484235 LINC00173Q6ZV60 143 aa17.13■□□□□ 0.33
SMDT1-203ENST00000484235 ZC2HC1BQ5TFG8 222 aa17.12■□□□□ 0.33
SMDT1-203ENST00000484235 SCXQ7RTU7 201 aa17.12■□□□□ 0.33
SMDT1-203ENST00000484235 LINC00526Q96FQ7 95 aa17.12■□□□□ 0.33
SMDT1-203ENST00000484235 LINC00614P0C842 121 aa17.11■□□□□ 0.33
SMDT1-203ENST00000484235 IGLV4-69A0A075B6H9 119 aa17.09■□□□□ 0.33
SMDT1-203ENST00000484235 EPM2AB3EWF7 344 aa17.09■□□□□ 0.33
SMDT1-203ENST00000484235 COX6A2Q02221 97 aa17.09■□□□□ 0.33
SMDT1-203ENST00000484235 CIRBP-AS1Q8TBR5 109 aa17.09■□□□□ 0.33
SMDT1-203ENST00000484235 RAB5BP61020 215 aa17.08■□□□□ 0.32
SMDT1-203ENST00000484235 SYCNQ0VAF6 134 aa17.08■□□□□ 0.32
SMDT1-203ENST00000484235 OR10D4PQ8NGN7 298 aa17.08■□□□□ 0.32
SMDT1-203ENST00000484235 A0A087WZ39 114 aa17.07■□□□□ 0.32
SMDT1-203ENST00000484235 FAM19A3Q7Z5A8 133 aa17.07■□□□□ 0.32
SMDT1-203ENST00000484235 URB1-AS1Q96HZ7 61 aa17.07■□□□□ 0.32
SMDT1-203ENST00000484235 CARD19Q96LW7 228 aa17.07■□□□□ 0.32
SMDT1-203ENST00000484235 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP17.07■□□□□ 0.32
SMDT1-203ENST00000484235 FAM229AH3BQW9 127 aa17.06■□□□□ 0.32
SMDT1-203ENST00000484235 C2orf48Q96LS8 159 aa17.06■□□□□ 0.32
SMDT1-203ENST00000484235 ORAOV1Q8WV07 137 aa17.05■□□□□ 0.32
SMDT1-203ENST00000484235 DMBT1Q9UGM3 2413 aaPredicted RBP17.04■□□□□ 0.32
SMDT1-203ENST00000484235 SEC11AP67812 179 aa17.04■□□□□ 0.32
SMDT1-203ENST00000484235 SPAG11BQ08648 103 aa17.04■□□□□ 0.32
SMDT1-203ENST00000484235 CIRBPQ14011 172 aaKnown RBP17.04■□□□□ 0.32
SMDT1-203ENST00000484235 Q5VSD8 79 aa17.04■□□□□ 0.32
SMDT1-203ENST00000484235 PANO1I0J062 215 aa17.03■□□□□ 0.32
SMDT1-203ENST00000484235 LINC01561Q8N1V8 128 aa17.03■□□□□ 0.32
SMDT1-203ENST00000484235 CAMK2N2Q96S95 79 aa17.03■□□□□ 0.32
SMDT1-203ENST00000484235 PKIGQ9Y2B9 76 aa17.03■□□□□ 0.32
SMDT1-203ENST00000484235 DPH3Q96FX2 82 aa17.02■□□□□ 0.32
SMDT1-203ENST00000484235 A0A096LNJ9 63 aa17.01■□□□□ 0.31
SMDT1-203ENST00000484235 F8WDY8 70 aa17.01■□□□□ 0.31
SMDT1-203ENST00000484235 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP17.01■□□□□ 0.31
SMDT1-203ENST00000484235 CST9LQ9H4G1 147 aa17.01■□□□□ 0.31
SMDT1-203ENST00000484235 HBDP02042 147 aa17■□□□□ 0.31
SMDT1-203ENST00000484235 HERVK_113P63121 156 aa17■□□□□ 0.31
SMDT1-203ENST00000484235 Q6ZRU5 148 aa17■□□□□ 0.31
SMDT1-203ENST00000484235 VPS13BQ7Z7G8 4022 aa16.99■□□□□ 0.31
SMDT1-203ENST00000484235 COLCA2A8K830 154 aa16.99■□□□□ 0.31
SMDT1-203ENST00000484235 TRGC2P03986 189 aa16.99■□□□□ 0.31
SMDT1-203ENST00000484235 CHTF8P0CG12 524 aa16.99■□□□□ 0.31
SMDT1-203ENST00000484235 GEMIN7Q9H840 131 aaKnown RBP16.99■□□□□ 0.31
SMDT1-203ENST00000484235 PMVKQ15126 192 aa16.98■□□□□ 0.31
SMDT1-203ENST00000484235 LINC00528Q8N1L1 170 aa16.98■□□□□ 0.31
SMDT1-203ENST00000484235 SPACA4Q8TDM5 124 aa16.98■□□□□ 0.31
SMDT1-203ENST00000484235 CHCHD1Q96BP2 118 aaKnown RBP16.98■□□□□ 0.31
SMDT1-203ENST00000484235 SRRM2Q9UQ35 2752 aaKnown RBP16.98■□□□□ 0.31
SMDT1-203ENST00000484235 A0A0J9YXV3 536 aa16.97■□□□□ 0.31
SMDT1-203ENST00000484235 INAFM2P0DMQ5 153 aa16.97■□□□□ 0.31
SMDT1-203ENST00000484235 PMCHL1Q16048 86 aa16.97■□□□□ 0.31
SMDT1-203ENST00000484235 PDZD11Q5EBL8 140 aa16.96■□□□□ 0.31
SMDT1-203ENST00000484235 TINCRA0A1B0GVN0 87 aa16.95■□□□□ 0.3
SMDT1-203ENST00000484235 KIAA0087Q14695 138 aa16.95■□□□□ 0.3
SMDT1-203ENST00000484235 RNF151Q2KHN1 245 aa16.95■□□□□ 0.3
SMDT1-203ENST00000484235 LINC00474Q9P2X8 69 aa16.95■□□□□ 0.3
SMDT1-203ENST00000484235 CDKN2A-AS1Q9UH64 79 aa16.95■□□□□ 0.3
SMDT1-203ENST00000484235 MYCBP2O75592 4640 aa16.95■□□□□ 0.3
SMDT1-203ENST00000484235 IGKV2-24A0A0C4DH68 120 aa16.94■□□□□ 0.3
SMDT1-203ENST00000484235 NDUFA1O15239 70 aa16.94■□□□□ 0.3
SMDT1-203ENST00000484235 MRPL35Q9NZE8 188 aaKnown RBP16.94■□□□□ 0.3
SMDT1-203ENST00000484235 A0A087WYN8 130 aa16.93■□□□□ 0.3
SMDT1-203ENST00000484235 A0A096LNI7 61 aa16.93■□□□□ 0.3
SMDT1-203ENST00000484235 LOC107984640A0A0U1RRK4 108 aa16.93■□□□□ 0.3
SMDT1-203ENST00000484235 MAJINQ3KP22 176 aa16.93■□□□□ 0.3
SMDT1-203ENST00000484235 ATP5LO75964 103 aa16.92■□□□□ 0.3
SMDT1-203ENST00000484235 PLA2G1BP04054 148 aaKnown RBP16.92■□□□□ 0.3
SMDT1-203ENST00000484235 BAGE3Q86Y29 109 aa16.92■□□□□ 0.3
SMDT1-203ENST00000484235 FLG2Q5D862 2391 aaPredicted RBP16.92■□□□□ 0.3
SMDT1-203ENST00000484235 LINC00469Q8N7U9 141 aa16.91■□□□□ 0.3
SMDT1-203ENST00000484235 PLAC8Q9NZF1 115 aa16.91■□□□□ 0.3
SMDT1-203ENST00000484235 UNQ6190/PRO20217Q6UXQ8 127 aa16.9■□□□□ 0.3
SMDT1-203ENST00000484235 PACRGQ96M98 296 aaPredicted RBP16.9■□□□□ 0.3
SMDT1-203ENST00000484235 IGLV5-45A0A087WSX0 123 aa16.89■□□□□ 0.29
SMDT1-203ENST00000484235 NDUFA6P56556 154 aa16.89■□□□□ 0.29
SMDT1-203ENST00000484235 C10orf25Q5T742 122 aa16.89■□□□□ 0.29
SMDT1-203ENST00000484235 SCO1O75880 301 aa16.88■□□□□ 0.29
SMDT1-203ENST00000484235 PRSS2P07478 247 aa16.88■□□□□ 0.29
SMDT1-203ENST00000484235 PTTG1IPP53801 180 aa16.87■□□□□ 0.29
SMDT1-203ENST00000484235 C6orf226Q5I0X4 101 aa16.87■□□□□ 0.29
SMDT1-203ENST00000484235 STPG4Q8N801 248 aa16.87■□□□□ 0.29
SMDT1-203ENST00000484235 HSBP1O75506 76 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms