RNA–Protein interactions for RNA: ENST00000484084.5

RTFDC1-208, Transcript of Protein RTF2 homolog, human

TSL 5

Gene RTFDC1, Length 657 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RTFDC1-208	ENST00000484084	VCY	O14598	125 aa		4.98	□□□□□ -1.61
RTFDC1-208	ENST00000484084	NDUFA1	O15239	70 aa		4.98	□□□□□ -1.61
RTFDC1-208	ENST00000484084	FAM231D	Q6ZW35	169 aa		4.98	□□□□□ -1.61
RTFDC1-208	ENST00000484084	RPL39	P62891	51 aa	Known RBP	4.97	□□□□□ -1.61
RTFDC1-208	ENST00000484084	UBE2B	P63146	152 aa		4.97	□□□□□ -1.61
RTFDC1-208	ENST00000484084	LINC00242	Q5T6M2	205 aa		4.97	□□□□□ -1.61
RTFDC1-208	ENST00000484084	C2orf82	Q6UX34	121 aa		4.97	□□□□□ -1.61
RTFDC1-208	ENST00000484084	SMIM15	Q7Z3B0	74 aa		4.97	□□□□□ -1.61
RTFDC1-208	ENST00000484084	NDUFC2-KCTD14	E9PQ53	114 aa		4.96	□□□□□ -1.62
RTFDC1-208	ENST00000484084	SUMO2	P61956	95 aa	Known RBP	4.96	□□□□□ -1.62
RTFDC1-208	ENST00000484084	CT83	Q5H943	113 aa		4.96	□□□□□ -1.62
RTFDC1-208	ENST00000484084	LCE2C	Q5TA81	110 aa		4.96	□□□□□ -1.62
RTFDC1-208	ENST00000484084	KRTAP13-1	Q8IUC0	172 aa		4.96	□□□□□ -1.62
RTFDC1-208	ENST00000484084	TYMSOS	Q8TAI1	123 aa		4.96	□□□□□ -1.62
RTFDC1-208	ENST00000484084	CTDSP1	Q9GZU7	261 aa		4.96	□□□□□ -1.62
RTFDC1-208	ENST00000484084	C22orf24	Q9Y442	160 aa		4.96	□□□□□ -1.62
RTFDC1-208	ENST00000484084	KANTR	A0A1W2PQU2	76 aa		4.95	□□□□□ -1.62
RTFDC1-208	ENST00000484084	HIGD1C	A8MV81	97 aa		4.95	□□□□□ -1.62
RTFDC1-208	ENST00000484084		A8MWL6	223 aa		4.95	□□□□□ -1.62
RTFDC1-208	ENST00000484084	GATC	O43716	136 aa	Known RBP	4.95	□□□□□ -1.62
RTFDC1-208	ENST00000484084	CRYGA	P11844	174 aa		4.95	□□□□□ -1.62
RTFDC1-208	ENST00000484084	CDIP1	Q9H305	208 aa		4.95	□□□□□ -1.62
RTFDC1-208	ENST00000484084	IGLV7-46	A0A075B6I9	117 aa		4.94	□□□□□ -1.62
RTFDC1-208	ENST00000484084	TRBV30	A0A0K0K1B3	111 aa		4.94	□□□□□ -1.62
RTFDC1-208	ENST00000484084		A0A1B0GUT8	65 aa		4.94	□□□□□ -1.62
RTFDC1-208	ENST00000484084	FCER1G	P30273	86 aa		4.94	□□□□□ -1.62
RTFDC1-208	ENST00000484084	MRPS36	P82909	103 aa	Known RBP	4.94	□□□□□ -1.62
RTFDC1-208	ENST00000484084	TRBV24-1	A0A075B6N3	115 aa		4.93	□□□□□ -1.62
RTFDC1-208	ENST00000484084	NUPR1	O60356	82 aa		4.93	□□□□□ -1.62
RTFDC1-208	ENST00000484084	BCE1	O60756	84 aa		4.93	□□□□□ -1.62
RTFDC1-208	ENST00000484084	MRPL51	Q4U2R6	128 aa	Known RBP	4.93	□□□□□ -1.62
RTFDC1-208	ENST00000484084	RPL32	P62910	135 aa	Known RBP	4.92	□□□□□ -1.62
RTFDC1-208	ENST00000484084	KRTAP19-2	Q3LHN2	52 aa		4.92	□□□□□ -1.62
RTFDC1-208	ENST00000484084	LINC00469	Q8N7U9	141 aa		4.92	□□□□□ -1.62
RTFDC1-208	ENST00000484084	KIR2DL4	Q99706	377 aa		4.92	□□□□□ -1.62
RTFDC1-208	ENST00000484084	XAGE1A	Q9HD64	81 aa		4.92	□□□□□ -1.62
RTFDC1-208	ENST00000484084	ZNF727	A8MUV8	499 aa		4.91	□□□□□ -1.62
RTFDC1-208	ENST00000484084	ASB16-AS1	Q495Z4	193 aa		4.91	□□□□□ -1.62
RTFDC1-208	ENST00000484084	FAM104B	Q5XKR9	115 aa		4.91	□□□□□ -1.62
RTFDC1-208	ENST00000484084	LINC00173	Q6ZV60	143 aa		4.91	□□□□□ -1.62
RTFDC1-208	ENST00000484084	LINC01551	Q86U37	167 aa		4.91	□□□□□ -1.62
RTFDC1-208	ENST00000484084	LINC00304	Q8N9R0	145 aa		4.91	□□□□□ -1.62
RTFDC1-208	ENST00000484084	C20orf78	Q9BR46	151 aa		4.91	□□□□□ -1.62
RTFDC1-208	ENST00000484084	SPANXA1	Q9NS26	97 aa		4.91	□□□□□ -1.62
RTFDC1-208	ENST00000484084		V9GYV3	84 aa		4.91	□□□□□ -1.62
RTFDC1-208	ENST00000484084	IFITM10	A6NMD0	228 aa		4.9	□□□□□ -1.63
RTFDC1-208	ENST00000484084	TMEM250	H0YL14	139 aa		4.9	□□□□□ -1.63
RTFDC1-208	ENST00000484084	RPL28	P46779	137 aa	Known RBP	4.9	□□□□□ -1.63
RTFDC1-208	ENST00000484084	HBB	P68871	147 aa		4.9	□□□□□ -1.63
RTFDC1-208	ENST00000484084	SMAGP	Q0VAQ4	97 aa		4.9	□□□□□ -1.63
RTFDC1-208	ENST00000484084	KRTAP13-3	Q3SY46	172 aa		4.9	□□□□□ -1.63
RTFDC1-208	ENST00000484084	FAM229B	Q4G0N7	80 aa		4.9	□□□□□ -1.63
RTFDC1-208	ENST00000484084	PPDPF	Q9H3Y8	114 aa		4.9	□□□□□ -1.63
RTFDC1-208	ENST00000484084	TP73-AS1	Q9UF72	201 aa		4.9	□□□□□ -1.63
RTFDC1-208	ENST00000484084	IGLV4-3	A0A075B6K6	122 aa		4.89	□□□□□ -1.63
RTFDC1-208	ENST00000484084	TEX46	H3BTG2	121 aa		4.89	□□□□□ -1.63
RTFDC1-208	ENST00000484084	PPP1R2P9	O14990	202 aa		4.89	□□□□□ -1.63
RTFDC1-208	ENST00000484084	TCAP	O15273	167 aa		4.89	□□□□□ -1.63
RTFDC1-208	ENST00000484084	TNFRSF6B	O95407	300 aa		4.89	□□□□□ -1.63
RTFDC1-208	ENST00000484084	PPP1R17	O96001	155 aa		4.89	□□□□□ -1.63
RTFDC1-208	ENST00000484084	TAGLN2	P37802	199 aa	Known RBP	4.89	□□□□□ -1.63
RTFDC1-208	ENST00000484084	LINC01547	P58512	204 aa	Predicted RBP	4.89	□□□□□ -1.63
RTFDC1-208	ENST00000484084	ZC2HC1B	Q5TFG8	222 aa		4.89	□□□□□ -1.63
RTFDC1-208	ENST00000484084	MRPL55	Q7Z7F7	128 aa	Known RBP	4.89	□□□□□ -1.63
RTFDC1-208	ENST00000484084	TMEM18	Q96B42	140 aa		4.89	□□□□□ -1.63
RTFDC1-208	ENST00000484084	PACRG	Q96M98	296 aa	Predicted RBP	4.89	□□□□□ -1.63
RTFDC1-208	ENST00000484084	LINC00167	Q96N53	147 aa		4.89	□□□□□ -1.63
RTFDC1-208	ENST00000484084	SMIM2	Q9BVW6	85 aa		4.89	□□□□□ -1.63
RTFDC1-208	ENST00000484084	OSTC	Q9NRP0	149 aa		4.89	□□□□□ -1.63
RTFDC1-208	ENST00000484084	TGIF2-C20orf24	A0A0A6YYL0	155 aa		4.88	□□□□□ -1.63
RTFDC1-208	ENST00000484084	RPL37AP8	A6NKH3	93 aa		4.88	□□□□□ -1.63
RTFDC1-208	ENST00000484084	NPY	P01303	97 aa		4.88	□□□□□ -1.63
RTFDC1-208	ENST00000484084	LBH	Q53QV2	105 aa	Predicted RBP	4.88	□□□□□ -1.63
RTFDC1-208	ENST00000484084	LINC01561	Q8N1V8	128 aa		4.88	□□□□□ -1.63
RTFDC1-208	ENST00000484084	BORCS7	Q96B45	105 aa		4.88	□□□□□ -1.63
RTFDC1-208	ENST00000484084	PYGO1	Q9Y3Y4	419 aa		4.88	□□□□□ -1.63
RTFDC1-208	ENST00000484084	LINC00862	A6NCI5	91 aa		4.87	□□□□□ -1.63
RTFDC1-208	ENST00000484084	CTAG1A	P78358	180 aa		4.87	□□□□□ -1.63
RTFDC1-208	ENST00000484084	SRSF3	P84103	164 aa	Known RBP	4.87	□□□□□ -1.63
RTFDC1-208	ENST00000484084	RIG	Q13278	110 aa		4.87	□□□□□ -1.63
RTFDC1-208	ENST00000484084	RGS21	Q2M5E4	152 aa		4.87	□□□□□ -1.63
RTFDC1-208	ENST00000484084	FAM19A3	Q7Z5A8	133 aa		4.86	□□□□□ -1.63
RTFDC1-208	ENST00000484084	C3orf22	Q8N5N4	141 aa		4.86	□□□□□ -1.63
RTFDC1-208	ENST00000484084	AMELX	Q99217	191 aa		4.86	□□□□□ -1.63
RTFDC1-208	ENST00000484084	EIF5A2	Q9GZV4	153 aa	Known RBP	4.86	□□□□□ -1.63
RTFDC1-208	ENST00000484084	IGLV5-37	A0A075B6J1	123 aa		4.85	□□□□□ -1.63
RTFDC1-208	ENST00000484084	SMIM27	A0A1W2PRY6	76 aa		4.85	□□□□□ -1.63
RTFDC1-208	ENST00000484084		D6R8Y8	96 aa		4.85	□□□□□ -1.63
RTFDC1-208	ENST00000484084	CKS2	P33552	79 aa		4.85	□□□□□ -1.63
RTFDC1-208	ENST00000484084	MT1H	P80294	61 aa		4.85	□□□□□ -1.63
RTFDC1-208	ENST00000484084	FAM74A3	Q4VXF1	159 aa		4.85	□□□□□ -1.63
RTFDC1-208	ENST00000484084		Q8IZM0	81 aa		4.85	□□□□□ -1.63
RTFDC1-208	ENST00000484084	BATF3	Q9NR55	127 aa		4.85	□□□□□ -1.63
RTFDC1-208	ENST00000484084	NAT8B	Q9UHF3	227 aa		4.85	□□□□□ -1.63
RTFDC1-208	ENST00000484084		A0A1B0GXF2	115 aa		4.84	□□□□□ -1.63
RTFDC1-208	ENST00000484084	GAGE10	A6NGK3	116 aa		4.84	□□□□□ -1.63
RTFDC1-208	ENST00000484084	SCO1	O75880	301 aa		4.84	□□□□□ -1.63
RTFDC1-208	ENST00000484084	SRP19	P09132	144 aa	Known RBP	4.84	□□□□□ -1.63
RTFDC1-208	ENST00000484084	IFI27	P40305	119 aa	Predicted RBP	4.84	□□□□□ -1.63
RTFDC1-208	ENST00000484084	SLC51B	Q86UW2	128 aa		4.84	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms