RNA–Protein interactions for RNA: ENST00000483888.6

COL12A1-207, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL12A1, Length 9,637 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-207ENST00000483888 GPHB5Q86YW7 130 aa7.57□□□□□ -1.2
COL12A1-207ENST00000483888 CNFNQ9BYD5 112 aa7.56□□□□□ -1.2
COL12A1-207ENST00000483888 hDV103S1A0JD37 113 aa7.56□□□□□ -1.2
COL12A1-207ENST00000483888 SMAD5-AS1Q9Y6J3 95 aa7.56□□□□□ -1.2
COL12A1-207ENST00000483888 PCOTHQ58A44 107 aa7.56□□□□□ -1.2
COL12A1-207ENST00000483888 Q6ZVQ6 151 aa7.56□□□□□ -1.2
COL12A1-207ENST00000483888 CCL18P55774 89 aa7.55□□□□□ -1.2
COL12A1-207ENST00000483888 RNASE3P12724 160 aaKnown RBP7.55□□□□□ -1.2
COL12A1-207ENST00000483888 HCG22E2RYF7 251 aa7.55□□□□□ -1.2
COL12A1-207ENST00000483888 LINC00575Q6W349 94 aa7.55□□□□□ -1.2
COL12A1-207ENST00000483888 ZNF73O43830 326 aaPredicted RBP7.55□□□□□ -1.2
COL12A1-207ENST00000483888 RNF223E7ERA6 249 aa7.55□□□□□ -1.2
COL12A1-207ENST00000483888 POLR2KP53803 58 aaKnown RBP7.55□□□□□ -1.2
COL12A1-207ENST00000483888 TRBV6-4A0A1B0GX49 114 aa7.54□□□□□ -1.2
COL12A1-207ENST00000483888 Q6ZTI0 123 aa7.54□□□□□ -1.2
COL12A1-207ENST00000483888 LINC00336Q6ZUF6 198 aa7.54□□□□□ -1.2
COL12A1-207ENST00000483888 CCDC140Q96MF4 163 aa7.54□□□□□ -1.2
COL12A1-207ENST00000483888 PRO0255Q9UI72 69 aa7.54□□□□□ -1.2
COL12A1-207ENST00000483888 TNFRSF13BO14836 293 aaPredicted RBP7.54□□□□□ -1.2
COL12A1-207ENST00000483888 TRBV6-8A0A0A6YYG3 113 aa7.54□□□□□ -1.2
COL12A1-207ENST00000483888 CRIP3Q6Q6R5 217 aa7.54□□□□□ -1.2
COL12A1-207ENST00000483888 IGF2-ASQ6U949 168 aa7.53□□□□□ -1.2
COL12A1-207ENST00000483888 C10orf25Q5T742 122 aa7.53□□□□□ -1.2
COL12A1-207ENST00000483888 A0A096LNJ9 63 aa7.53□□□□□ -1.2
COL12A1-207ENST00000483888 M0R378 163 aa7.53□□□□□ -1.2
COL12A1-207ENST00000483888 IGKV2-24A0A0C4DH68 120 aa7.52□□□□□ -1.2
COL12A1-207ENST00000483888 DEFB4AO15263 64 aa7.52□□□□□ -1.21
COL12A1-207ENST00000483888 IGLV1-47P01700 117 aa7.52□□□□□ -1.21
COL12A1-207ENST00000483888 FHL2Q14192 279 aa7.51□□□□□ -1.21
COL12A1-207ENST00000483888 C1orf229Q6ZS94 237 aaPredicted RBP7.51□□□□□ -1.21
COL12A1-207ENST00000483888 ZNF706Q9Y5V0 76 aaPredicted RBP7.51□□□□□ -1.21
COL12A1-207ENST00000483888 SPINK6Q6UWN8 80 aa7.51□□□□□ -1.21
COL12A1-207ENST00000483888 SBSPONQ8IVN8 264 aa7.51□□□□□ -1.21
COL12A1-207ENST00000483888 F8W735 103 aaPredicted RBP7.51□□□□□ -1.21
COL12A1-207ENST00000483888 PLA2G2AP14555 144 aa7.51□□□□□ -1.21
COL12A1-207ENST00000483888 MAP6D1Q9H9H5 199 aa7.5□□□□□ -1.21
COL12A1-207ENST00000483888 C11orf21Q9P2W6 132 aa7.5□□□□□ -1.21
COL12A1-207ENST00000483888 RIF1Q5UIP0 2472 aaKnown RBP7.5□□□□□ -1.21
COL12A1-207ENST00000483888 SPINT4Q6UDR6 99 aa7.5□□□□□ -1.21
COL12A1-207ENST00000483888 Q8N7P7 452 aa7.5□□□□□ -1.21
COL12A1-207ENST00000483888 C1orf137Q5JT78 98 aa7.5□□□□□ -1.21
COL12A1-207ENST00000483888 COX6A2Q02221 97 aa7.5□□□□□ -1.21
COL12A1-207ENST00000483888 BCE1O60756 84 aa7.5□□□□□ -1.21
COL12A1-207ENST00000483888 PRR3P79522 188 aaKnown RBP7.5□□□□□ -1.21
COL12A1-207ENST00000483888 PRM2P04554 102 aa7.49□□□□□ -1.21
COL12A1-207ENST00000483888 PRR9Q5T870 116 aa7.49□□□□□ -1.21
COL12A1-207ENST00000483888 ZNF580Q9UK33 172 aa7.49□□□□□ -1.21
COL12A1-207ENST00000483888 KTN1-AS1Q86SY8 53 aa7.48□□□□□ -1.21
COL12A1-207ENST00000483888 CD164L2Q6UWJ8 174 aa7.48□□□□□ -1.21
COL12A1-207ENST00000483888 A0A1B0GU69 56 aa7.48□□□□□ -1.21
COL12A1-207ENST00000483888 RPL37AP8A6NKH3 93 aa7.48□□□□□ -1.21
COL12A1-207ENST00000483888 SMIM29Q86T20 159 aa7.48□□□□□ -1.21
COL12A1-207ENST00000483888 LINC00474Q9P2X8 69 aa7.48□□□□□ -1.21
COL12A1-207ENST00000483888 DEFB135Q30KP9 77 aa7.47□□□□□ -1.21
COL12A1-207ENST00000483888 Q8IZM0 81 aa7.47□□□□□ -1.21
COL12A1-207ENST00000483888 C1orf64Q8NEQ6 169 aa7.47□□□□□ -1.21
COL12A1-207ENST00000483888 RETNLBQ9BQ08 111 aa7.47□□□□□ -1.21
COL12A1-207ENST00000483888 SMIM1B2RUZ4 78 aa7.46□□□□□ -1.21
COL12A1-207ENST00000483888 FAM215AQ9Y5M1 114 aa7.46□□□□□ -1.21
COL12A1-207ENST00000483888 LINC00959A0A1B0GUT2 108 aa7.46□□□□□ -1.21
COL12A1-207ENST00000483888 DEFB116Q30KQ4 102 aa7.46□□□□□ -1.22
COL12A1-207ENST00000483888 C4orf3Q8WVX3 66 aa7.46□□□□□ -1.22
COL12A1-207ENST00000483888 LINC00574Q9H8X3 128 aa7.46□□□□□ -1.22
COL12A1-207ENST00000483888 IGLV2-18A0A075B6J9 118 aa7.45□□□□□ -1.22
COL12A1-207ENST00000483888 CDC42SE2Q9NRR3 84 aa7.45□□□□□ -1.22
COL12A1-207ENST00000483888 MUC7Q8TAX7 377 aa7.45□□□□□ -1.22
COL12A1-207ENST00000483888 LINC00242Q5T6M2 205 aa7.45□□□□□ -1.22
COL12A1-207ENST00000483888 WIPF1O43516 503 aa7.45□□□□□ -1.22
COL12A1-207ENST00000483888 C9orf66Q5T8R8 295 aa7.45□□□□□ -1.22
COL12A1-207ENST00000483888 Q96MF0 132 aa7.45□□□□□ -1.22
COL12A1-207ENST00000483888 LOC100131303A0A0U1RQF7 123 aa7.44□□□□□ -1.22
COL12A1-207ENST00000483888 LY6LH3BQJ8 138 aa7.44□□□□□ -1.22
COL12A1-207ENST00000483888 LINC01548A6NM66 108 aa7.44□□□□□ -1.22
COL12A1-207ENST00000483888 TM2D3Q9BRN9 247 aa7.44□□□□□ -1.22
COL12A1-207ENST00000483888 K7EQG2 157 aa7.43□□□□□ -1.22
COL12A1-207ENST00000483888 THSD7BQ9C0I4 1608 aa7.43□□□□□ -1.22
COL12A1-207ENST00000483888 NHLRC4P0CG21 123 aaPredicted RBP7.43□□□□□ -1.22
COL12A1-207ENST00000483888 IGLV9-49A0A0B4J1Y8 123 aa7.43□□□□□ -1.22
COL12A1-207ENST00000483888 ATP11AUNQ6ZP68 121 aa7.43□□□□□ -1.22
COL12A1-207ENST00000483888 C9orf116Q5BN46 136 aaPredicted RBP7.42□□□□□ -1.22
COL12A1-207ENST00000483888 C7orf65Q6ZTY9 151 aa7.42□□□□□ -1.22
COL12A1-207ENST00000483888 FHL3Q13643 280 aa7.42□□□□□ -1.22
COL12A1-207ENST00000483888 TRAV10A0A0B4J240 114 aa7.42□□□□□ -1.22
COL12A1-207ENST00000483888 WDR87Q6ZQQ6 2873 aa7.42□□□□□ -1.22
COL12A1-207ENST00000483888 SPINK1P00995 79 aa7.42□□□□□ -1.22
COL12A1-207ENST00000483888 SYCNQ0VAF6 134 aa7.42□□□□□ -1.22
COL12A1-207ENST00000483888 SMCR5Q8TEV8 140 aa7.42□□□□□ -1.22
COL12A1-207ENST00000483888 PSMG3-AS1Q96PY0 264 aa7.42□□□□□ -1.22
COL12A1-207ENST00000483888 AMELXQ99217 191 aa7.42□□□□□ -1.22
COL12A1-207ENST00000483888 KLLNB2CW77 178 aa7.41□□□□□ -1.22
COL12A1-207ENST00000483888 IGHV6-1A0A0B4J1U7 121 aa7.41□□□□□ -1.22
COL12A1-207ENST00000483888 C14orf177Q52M58 125 aa7.41□□□□□ -1.22
COL12A1-207ENST00000483888 LY6G6EA0A0G2JKS1 128 aa7.41□□□□□ -1.22
COL12A1-207ENST00000483888 LINC00337Q8N6G1 96 aa7.41□□□□□ -1.22
COL12A1-207ENST00000483888 C2orf48Q96LS8 159 aa7.41□□□□□ -1.22
COL12A1-207ENST00000483888 U3KQA8 63 aa7.41□□□□□ -1.22
COL12A1-207ENST00000483888 ZFP36P26651 326 aaKnown RBP7.4□□□□□ -1.22
COL12A1-207ENST00000483888 A8MUN3 132 aa7.4□□□□□ -1.22
COL12A1-207ENST00000483888 A8MTW9 85 aa7.4□□□□□ -1.22
COL12A1-207ENST00000483888 A6NDX4 124 aa7.4□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms