RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 REG3GQ6UW15 175 aa11.05□□□□□ -0.64
ATG4B-221ENST00000483778 KRTAP11-1Q8IUC1 163 aa11.05□□□□□ -0.64
ATG4B-221ENST00000483778 IGHV3OR16-9A0A0B4J2B5 98 aa11.04□□□□□ -0.64
ATG4B-221ENST00000483778 A0A1B0GXF2 115 aa11.04□□□□□ -0.64
ATG4B-221ENST00000483778 RPL18AQ02543 176 aaKnown RBP11.04□□□□□ -0.64
ATG4B-221ENST00000483778 SMIM2Q9BVW6 85 aa11.04□□□□□ -0.64
ATG4B-221ENST00000483778 SMAGPQ0VAQ4 97 aa11.03□□□□□ -0.64
ATG4B-221ENST00000483778 UNQ6190/PRO20217Q6UXQ8 127 aa11.03□□□□□ -0.64
ATG4B-221ENST00000483778 TMEM18Q96B42 140 aa11.03□□□□□ -0.64
ATG4B-221ENST00000483778 FAM168BA1KXE4 195 aa11.02□□□□□ -0.65
ATG4B-221ENST00000483778 PEA15Q15121 130 aa11.02□□□□□ -0.65
ATG4B-221ENST00000483778 RNF151Q2KHN1 245 aa11.02□□□□□ -0.65
ATG4B-221ENST00000483778 ORAOV1Q8WV07 137 aa11.02□□□□□ -0.65
ATG4B-221ENST00000483778 A0A1B0GW15 77 aa11.01□□□□□ -0.65
ATG4B-221ENST00000483778 MT-ND6P03923 174 aa11□□□□□ -0.65
ATG4B-221ENST00000483778 HBBP68871 147 aa11□□□□□ -0.65
ATG4B-221ENST00000483778 MRPS36P82909 103 aaKnown RBP11□□□□□ -0.65
ATG4B-221ENST00000483778 KRTAP7-1Q8IUC3 87 aa11□□□□□ -0.65
ATG4B-221ENST00000483778 OR10D4PQ8NGN7 298 aa11□□□□□ -0.65
ATG4B-221ENST00000483778 SPANXA1Q9NS26 97 aa11□□□□□ -0.65
ATG4B-221ENST00000483778 RNF213Q63HN8 5207 aa10.99□□□□□ -0.65
ATG4B-221ENST00000483778 MRPL35Q9NZE8 188 aaKnown RBP10.99□□□□□ -0.65
ATG4B-221ENST00000483778 IFITM10A6NMD0 228 aa10.98□□□□□ -0.65
ATG4B-221ENST00000483778 KIAA0087Q14695 138 aa10.98□□□□□ -0.65
ATG4B-221ENST00000483778 C1orf137Q5JT78 98 aa10.98□□□□□ -0.65
ATG4B-221ENST00000483778 C6orf48Q9UBA6 75 aa10.98□□□□□ -0.65
ATG4B-221ENST00000483778 F8W036 122 aa10.97□□□□□ -0.65
ATG4B-221ENST00000483778 ZC2HC1BQ5TFG8 222 aa10.97□□□□□ -0.65
ATG4B-221ENST00000483778 TMEM136Q6ZRR5 245 aa10.96□□□□□ -0.65
ATG4B-221ENST00000483778 IGLV4-3A0A075B6K6 122 aa10.95□□□□□ -0.66
ATG4B-221ENST00000483778 NDUFA1O15239 70 aa10.95□□□□□ -0.66
ATG4B-221ENST00000483778 LINC00242Q5T6M2 205 aa10.95□□□□□ -0.66
ATG4B-221ENST00000483778 PRELID3AQ96N28 172 aa10.95□□□□□ -0.66
ATG4B-221ENST00000483778 SMDT1Q9H4I9 107 aa10.95□□□□□ -0.66
ATG4B-221ENST00000483778 PPBPP02775 128 aa10.94□□□□□ -0.66
ATG4B-221ENST00000483778 IGLV7-43P04211 117 aa10.94□□□□□ -0.66
ATG4B-221ENST00000483778 S100A8P05109 93 aa10.94□□□□□ -0.66
ATG4B-221ENST00000483778 GAGE2EQ4V326 116 aa10.94□□□□□ -0.66
ATG4B-221ENST00000483778 C2orf82Q6UX34 121 aa10.94□□□□□ -0.66
ATG4B-221ENST00000483778 FAM19A5Q7Z5A7 132 aaPredicted RBP10.94□□□□□ -0.66
ATG4B-221ENST00000483778 ORMDL3Q8N138 153 aa10.94□□□□□ -0.66
ATG4B-221ENST00000483778 IMMP2LQ96T52 175 aa10.94□□□□□ -0.66
ATG4B-221ENST00000483778 GAGE2DQ9UEU5 116 aa10.94□□□□□ -0.66
ATG4B-221ENST00000483778 A0A087WZ39 114 aa10.93□□□□□ -0.66
ATG4B-221ENST00000483778 LOC389332A0A1B0GUA5 103 aa10.93□□□□□ -0.66
ATG4B-221ENST00000483778 F8WDY8 70 aa10.93□□□□□ -0.66
ATG4B-221ENST00000483778 TLX1NBP0CAT3 122 aa10.93□□□□□ -0.66
ATG4B-221ENST00000483778 PRR26Q8N8Z3 221 aa10.93□□□□□ -0.66
ATG4B-221ENST00000483778 RAB5AP20339 215 aa10.92□□□□□ -0.66
ATG4B-221ENST00000483778 PYGO1Q9Y3Y4 419 aa10.92□□□□□ -0.66
ATG4B-221ENST00000483778 PRSS47A8MTI9 375 aa10.91□□□□□ -0.66
ATG4B-221ENST00000483778 TGIF2-C20orf24A0A0A6YYL0 155 aa10.9□□□□□ -0.66
ATG4B-221ENST00000483778 IFI27P40305 119 aaPredicted RBP10.9□□□□□ -0.66
ATG4B-221ENST00000483778 LINC00173Q6ZV60 143 aa10.9□□□□□ -0.66
ATG4B-221ENST00000483778 UBE2D1P51668 147 aa10.89□□□□□ -0.67
ATG4B-221ENST00000483778 C9orf129Q5T035 196 aaKnown RBP10.89□□□□□ -0.67
ATG4B-221ENST00000483778 ATP5L2Q7Z4Y8 100 aa10.89□□□□□ -0.67
ATG4B-221ENST00000483778 TMEM141Q96I45 108 aa10.89□□□□□ -0.67
ATG4B-221ENST00000483778 LPAP08519 4548 aa10.89□□□□□ -0.67
ATG4B-221ENST00000483778 DIRC1Q969H9 104 aa10.87□□□□□ -0.67
ATG4B-221ENST00000483778 H0Y9J4 135 aa10.86□□□□□ -0.67
ATG4B-221ENST00000483778 KRTAP1-4P0C5Y4 121 aa10.86□□□□□ -0.67
ATG4B-221ENST00000483778 Q8N8P6 123 aa10.86□□□□□ -0.67
ATG4B-221ENST00000483778 M0QXV9 152 aa10.85□□□□□ -0.67
ATG4B-221ENST00000483778 C2orf66Q6UXQ4 117 aa10.85□□□□□ -0.67
ATG4B-221ENST00000483778 TEX43Q6ZNM6 134 aa10.85□□□□□ -0.67
ATG4B-221ENST00000483778 AMELXQ99217 191 aa10.85□□□□□ -0.67
ATG4B-221ENST00000483778 MAP1LC3AQ9H492 121 aa10.85□□□□□ -0.67
ATG4B-221ENST00000483778 TRBV30A0A0K0K1B3 111 aa10.84□□□□□ -0.67
ATG4B-221ENST00000483778 IGIPA6NJ69 53 aa10.84□□□□□ -0.67
ATG4B-221ENST00000483778 NDUFC2-KCTD14E9PQ53 114 aa10.84□□□□□ -0.67
ATG4B-221ENST00000483778 LINC00469Q8N7U9 141 aa10.83□□□□□ -0.68
ATG4B-221ENST00000483778 CYSLTR1Q9Y271 337 aa10.83□□□□□ -0.68
ATG4B-221ENST00000483778 LINC01561Q8N1V8 128 aa10.82□□□□□ -0.68
ATG4B-221ENST00000483778 VCX2Q9H322 139 aa10.82□□□□□ -0.68
ATG4B-221ENST00000483778 TOMM7Q9P0U1 55 aa10.82□□□□□ -0.68
ATG4B-221ENST00000483778 LAMTOR2Q9Y2Q5 125 aa10.82□□□□□ -0.68
ATG4B-221ENST00000483778 UBE2BP63146 152 aa10.81□□□□□ -0.68
ATG4B-221ENST00000483778 PACRGQ96M98 296 aaPredicted RBP10.81□□□□□ -0.68
ATG4B-221ENST00000483778 MT-ND4LP03901 98 aa10.8□□□□□ -0.68
ATG4B-221ENST00000483778 C2orf88Q9BSF0 95 aa10.8□□□□□ -0.68
ATG4B-221ENST00000483778 Q6ZN92 141 aa10.79□□□□□ -0.68
ATG4B-221ENST00000483778 FAM19A3Q7Z5A8 133 aa10.79□□□□□ -0.68
ATG4B-221ENST00000483778 ANAPC16Q96DE5 110 aa10.79□□□□□ -0.68
ATG4B-221ENST00000483778 XAGE1AQ9HD64 81 aa10.79□□□□□ -0.68
ATG4B-221ENST00000483778 CDKN2A-AS1Q9UH64 79 aa10.79□□□□□ -0.68
ATG4B-221ENST00000483778 KIAA1644Q3SXP7 199 aa10.78□□□□□ -0.68
ATG4B-221ENST00000483778 C6orf226Q5I0X4 101 aa10.78□□□□□ -0.68
ATG4B-221ENST00000483778 PNRC1Q12796 327 aaPredicted RBP10.77□□□□□ -0.69
ATG4B-221ENST00000483778 ORMDL2Q53FV1 153 aa10.77□□□□□ -0.69
ATG4B-221ENST00000483778 ALKBH7Q9BT30 221 aaPredicted RBP10.77□□□□□ -0.69
ATG4B-221ENST00000483778 C22orf24Q9Y442 160 aa10.77□□□□□ -0.69
ATG4B-221ENST00000483778 PRSS2P07478 247 aa10.76□□□□□ -0.69
ATG4B-221ENST00000483778 CKS1BP61024 79 aa10.76□□□□□ -0.69
ATG4B-221ENST00000483778 Q8IZM0 81 aa10.76□□□□□ -0.69
ATG4B-221ENST00000483778 IGLV1-50A0A075B6I6 118 aa10.75□□□□□ -0.69
ATG4B-221ENST00000483778 CTDSP1Q9GZU7 261 aa10.75□□□□□ -0.69
ATG4B-221ENST00000483778 ADCYAP1P18509 176 aa10.74□□□□□ -0.69
ATG4B-221ENST00000483778 NXT2Q9NPJ8 142 aaKnown RBP10.74□□□□□ -0.69
ATG4B-221ENST00000483778 NPSP0C0P6 89 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms