RNA–Protein interactions for RNA: ENST00000483142.5

HDAC9-224, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 305 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-224ENST00000483142 IGHV3OR16-9A0A0B4J2B5 98 aa3.04□□□□□ -1.92
HDAC9-224ENST00000483142 F8VRH5 84 aa3.04□□□□□ -1.92
HDAC9-224ENST00000483142 RTL8CO15255 209 aa3.04□□□□□ -1.92
HDAC9-224ENST00000483142 SEC11AP67812 179 aa3.04□□□□□ -1.92
HDAC9-224ENST00000483142 FOXI1Q12951 378 aa3.04□□□□□ -1.92
HDAC9-224ENST00000483142 PMVKQ15126 192 aa3.04□□□□□ -1.92
HDAC9-224ENST00000483142 PMCHL1Q16048 86 aa3.04□□□□□ -1.92
HDAC9-224ENST00000483142 LINC00242Q5T6M2 205 aa3.04□□□□□ -1.92
HDAC9-224ENST00000483142 LINC01545Q5VT33 79 aa3.04□□□□□ -1.92
HDAC9-224ENST00000483142 DGAT2L7PQ6IED9 249 aa3.04□□□□□ -1.92
HDAC9-224ENST00000483142 CD164L2Q6UWJ8 174 aa3.04□□□□□ -1.92
HDAC9-224ENST00000483142 LINC00269Q8N2A0 174 aa3.04□□□□□ -1.92
HDAC9-224ENST00000483142 FAM19A2Q8N3H0 131 aa3.04□□□□□ -1.92
HDAC9-224ENST00000483142 DEFB104AQ8WTQ1 72 aa3.04□□□□□ -1.92
HDAC9-224ENST00000483142 UBE2WQ96B02 151 aa3.04□□□□□ -1.92
HDAC9-224ENST00000483142 SCGB3A1Q96QR1 104 aa3.04□□□□□ -1.92
HDAC9-224ENST00000483142 HIST1H2BLQ99880 126 aa3.04□□□□□ -1.92
HDAC9-224ENST00000483142 C2orf88Q9BSF0 95 aa3.04□□□□□ -1.92
HDAC9-224ENST00000483142 HSPB8Q9UJY1 196 aa3.04□□□□□ -1.92
HDAC9-224ENST00000483142 DNAH17Q9UFH2 4485 aa3.04□□□□□ -1.92
HDAC9-224ENST00000483142 KMT2AQ03164 3969 aa3.03□□□□□ -1.92
HDAC9-224ENST00000483142 A0A087WZ39 114 aa3.03□□□□□ -1.92
HDAC9-224ENST00000483142 TINCRA0A1B0GVN0 87 aa3.03□□□□□ -1.92
HDAC9-224ENST00000483142 LRCOL1A6NCL2 159 aa3.03□□□□□ -1.92
HDAC9-224ENST00000483142 TMEM262E9PQX1 116 aa3.03□□□□□ -1.92
HDAC9-224ENST00000483142 S100A6P06703 90 aa3.03□□□□□ -1.92
HDAC9-224ENST00000483142 ZNF22P17026 224 aaPredicted RBP3.03□□□□□ -1.92
HDAC9-224ENST00000483142 NDUFA6P56556 154 aa3.03□□□□□ -1.92
HDAC9-224ENST00000483142 HERVK_113P63121 156 aa3.03□□□□□ -1.92
HDAC9-224ENST00000483142 CLPSL2Q6UWE3 100 aa3.03□□□□□ -1.92
HDAC9-224ENST00000483142 PET117Q6UWS5 81 aa3.03□□□□□ -1.92
HDAC9-224ENST00000483142 LINC00336Q6ZUF6 198 aa3.03□□□□□ -1.92
HDAC9-224ENST00000483142 C15orf56Q8N910 161 aa3.03□□□□□ -1.92
HDAC9-224ENST00000483142 CHCHD10Q8WYQ3 142 aaPredicted RBP3.03□□□□□ -1.92
HDAC9-224ENST00000483142 OPRPNQ99935 248 aaPredicted RBP3.03□□□□□ -1.92
HDAC9-224ENST00000483142 CHAC1Q9BUX1 264 aa3.03□□□□□ -1.92
HDAC9-224ENST00000483142 TM2D2Q9BX73 214 aa3.03□□□□□ -1.92
HDAC9-224ENST00000483142 CST9LQ9H4G1 147 aa3.03□□□□□ -1.92
HDAC9-224ENST00000483142 DNAH10Q8IVF4 4471 aa3.03□□□□□ -1.92
HDAC9-224ENST00000483142 FRAS1Q86XX4 4008 aa3.03□□□□□ -1.92
HDAC9-224ENST00000483142 DNAH2Q9P225 4427 aa3.02□□□□□ -1.93
HDAC9-224ENST00000483142 GVQW2A0A096LPI5 108 aaPredicted RBP3.02□□□□□ -1.93
HDAC9-224ENST00000483142 IGLV5-39A0A0G2JS06 123 aa3.02□□□□□ -1.93
HDAC9-224ENST00000483142 A0A1B0GVY2 172 aa3.02□□□□□ -1.93
HDAC9-224ENST00000483142 C11orf86A6NJI1 115 aa3.02□□□□□ -1.93
HDAC9-224ENST00000483142 SMIM1B2RUZ4 78 aa3.02□□□□□ -1.93
HDAC9-224ENST00000483142 SYS1-DBNDD2H3BUS1 97 aa3.02□□□□□ -1.93
HDAC9-224ENST00000483142 C3orf79P0CE67 100 aa3.02□□□□□ -1.93
HDAC9-224ENST00000483142 PLNP26678 52 aa3.02□□□□□ -1.93
HDAC9-224ENST00000483142 AKR1D1P51857 326 aa3.02□□□□□ -1.93
HDAC9-224ENST00000483142 WFDC2Q14508 124 aa3.02□□□□□ -1.93
HDAC9-224ENST00000483142 SS18Q15532 418 aa3.02□□□□□ -1.93
HDAC9-224ENST00000483142 RNASE13Q5GAN3 156 aaKnown RBP3.02□□□□□ -1.93
HDAC9-224ENST00000483142 C1orf134Q5TEV5 83 aa3.02□□□□□ -1.93
HDAC9-224ENST00000483142 MAPKAPK5-AS1Q8N8E1 139 aa3.02□□□□□ -1.93
HDAC9-224ENST00000483142 OR10D4PQ8NGN7 298 aa3.02□□□□□ -1.93
HDAC9-224ENST00000483142 VCX2Q9H322 139 aa3.02□□□□□ -1.93
HDAC9-224ENST00000483142 IGHV3-64A0A075B6Q5 118 aa3.01□□□□□ -1.93
HDAC9-224ENST00000483142 IGKV2D-24A0A075B6R9 120 aa3.01□□□□□ -1.93
HDAC9-224ENST00000483142 A0A087WTM6 91 aa3.01□□□□□ -1.93
HDAC9-224ENST00000483142 TRAV13-1A0A0B4J241 112 aa3.01□□□□□ -1.93
HDAC9-224ENST00000483142 IGHV1-58A0A0C4DH39 117 aa3.01□□□□□ -1.93
HDAC9-224ENST00000483142 A0A0J9YXV3 536 aa3.01□□□□□ -1.93
HDAC9-224ENST00000483142 GAGE12HA6NDE8 117 aa3.01□□□□□ -1.93
HDAC9-224ENST00000483142 F8WDY8 70 aa3.01□□□□□ -1.93
HDAC9-224ENST00000483142 COX7A2LO14548 114 aa3.01□□□□□ -1.93
HDAC9-224ENST00000483142 SNRPEP62304 92 aaKnown RBP3.01□□□□□ -1.93
HDAC9-224ENST00000483142 CNBPP62633 177 aaKnown RBP3.01□□□□□ -1.93
HDAC9-224ENST00000483142 C14orf177Q52M58 125 aa3.01□□□□□ -1.93
HDAC9-224ENST00000483142 ZC2HC1BQ5TFG8 222 aa3.01□□□□□ -1.93
HDAC9-224ENST00000483142 KRTAP19-1Q8IUB9 90 aa3.01□□□□□ -1.93
HDAC9-224ENST00000483142 MAP1LC3CQ9BXW4 147 aa3.01□□□□□ -1.93
HDAC9-224ENST00000483142 Q9HAA7 133 aa3.01□□□□□ -1.93
HDAC9-224ENST00000483142 MRPL35Q9NZE8 188 aaKnown RBP3.01□□□□□ -1.93
HDAC9-224ENST00000483142 CHTOPQ9Y3Y2 248 aaKnown RBP3.01□□□□□ -1.93
HDAC9-224ENST00000483142 FAT2Q9NYQ8 4349 aa3.01□□□□□ -1.93
HDAC9-224ENST00000483142 BIRC6Q9NR09 4857 aa3.01□□□□□ -1.93
HDAC9-224ENST00000483142 DNAH11Q96DT5 4516 aa3□□□□□ -1.93
HDAC9-224ENST00000483142 DYNC1H1Q14204 4646 aaKnown RBP3□□□□□ -1.93
HDAC9-224ENST00000483142 IGLV10-54A0A075B6I4 117 aa3□□□□□ -1.93
HDAC9-224ENST00000483142 TMEM223A0PJW6 202 aa3□□□□□ -1.93
HDAC9-224ENST00000483142 C20orf202A1L168 122 aa3□□□□□ -1.93
HDAC9-224ENST00000483142 USP17L23D6RBM5 183 aa3□□□□□ -1.93
HDAC9-224ENST00000483142 M0R2N4 97 aa3□□□□□ -1.93
HDAC9-224ENST00000483142 DPM2O94777 84 aa3□□□□□ -1.93
HDAC9-224ENST00000483142 FABP4P15090 132 aa3□□□□□ -1.93
HDAC9-224ENST00000483142 S100A2P29034 98 aa3□□□□□ -1.93
HDAC9-224ENST00000483142 CXCL5P42830 114 aa3□□□□□ -1.93
HDAC9-224ENST00000483142 XCL1P47992 114 aa3□□□□□ -1.93
HDAC9-224ENST00000483142 COX6A2Q02221 97 aa3□□□□□ -1.93
HDAC9-224ENST00000483142 KIAA0087Q14695 138 aa3□□□□□ -1.93
HDAC9-224ENST00000483142 KRTAP19-4Q3LI73 84 aa3□□□□□ -1.93
HDAC9-224ENST00000483142 Q8IZM0 81 aa3□□□□□ -1.93
HDAC9-224ENST00000483142 NTN5Q8WTR8 489 aaPredicted RBP3□□□□□ -1.93
HDAC9-224ENST00000483142 C2orf48Q96LS8 159 aa3□□□□□ -1.93
HDAC9-224ENST00000483142 CDKN2A-AS1Q9UH64 79 aa3□□□□□ -1.93
HDAC9-224ENST00000483142 IGKV3OR2-268A0A0C4DH90 116 aa2.99□□□□□ -1.93
HDAC9-224ENST00000483142 H3BRM9 83 aa2.99□□□□□ -1.93
HDAC9-224ENST00000483142 APOMO95445 188 aa2.99□□□□□ -1.93
HDAC9-224ENST00000483142 IGKCP01834 107 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms