RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 C10orf99Q6UWK7 81 aa8.43□□□□□ -1.06
VTI1A-205ENST00000483122 Q96MF0 132 aa8.43□□□□□ -1.06
VTI1A-205ENST00000483122 ABCA2Q9BZC7 2435 aa8.43□□□□□ -1.06
VTI1A-205ENST00000483122 GCN1Q92616 2671 aaKnown RBP8.43□□□□□ -1.06
VTI1A-205ENST00000483122 IGHV3-53P01767 116 aa8.42□□□□□ -1.06
VTI1A-205ENST00000483122 SLPIP03973 132 aa8.42□□□□□ -1.06
VTI1A-205ENST00000483122 LECT2O14960 151 aa8.42□□□□□ -1.06
VTI1A-205ENST00000483122 PF4P02776 101 aa8.42□□□□□ -1.06
VTI1A-205ENST00000483122 IGHV4-38-2P0DP08 117 aa8.42□□□□□ -1.06
VTI1A-205ENST00000483122 CFHR3Q02985 330 aa8.42□□□□□ -1.06
VTI1A-205ENST00000483122 MIR7-3HGQ8N6C7 128 aa8.42□□□□□ -1.06
VTI1A-205ENST00000483122 WFDC9Q8NEX5 89 aa8.42□□□□□ -1.06
VTI1A-205ENST00000483122 A6NDX4 124 aa8.41□□□□□ -1.06
VTI1A-205ENST00000483122 FAM19A3Q7Z5A8 133 aa8.41□□□□□ -1.06
VTI1A-205ENST00000483122 SND1-IT1Q9HBX3 110 aa8.41□□□□□ -1.06
VTI1A-205ENST00000483122 OVOL2Q9BRP0 275 aa8.41□□□□□ -1.06
VTI1A-205ENST00000483122 VPS13CQ709C8 3753 aa8.4□□□□□ -1.06
VTI1A-205ENST00000483122 RBMY1BA6NDE4 496 aaKnown RBP8.4□□□□□ -1.06
VTI1A-205ENST00000483122 RBMY1EA6NEQ0 496 aaKnown RBP8.4□□□□□ -1.06
VTI1A-205ENST00000483122 GHRHP01286 108 aa8.4□□□□□ -1.06
VTI1A-205ENST00000483122 RBMY1DP0C7P1 496 aaKnown RBP8.4□□□□□ -1.06
VTI1A-205ENST00000483122 COL12A1Q99715 3063 aa8.4□□□□□ -1.06
VTI1A-205ENST00000483122 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.4□□□□□ -1.062e-6■□□□□ 8.2
VTI1A-205ENST00000483122 USP9YO00507 2555 aaPredicted RBP8.39□□□□□ -1.07
VTI1A-205ENST00000483122 TRAV23DV6A0A075B6W5 121 aa8.39□□□□□ -1.07
VTI1A-205ENST00000483122 SS18Q15532 418 aa8.38□□□□□ -1.07
VTI1A-205ENST00000483122 H0YGX0 51 aa8.38□□□□□ -1.07
VTI1A-205ENST00000483122 DEFB131AP59861 70 aa8.38□□□□□ -1.07
VTI1A-205ENST00000483122 RPL36AP83881 106 aaKnown RBP8.38□□□□□ -1.07
VTI1A-205ENST00000483122 NTM-AS1Q6ZSK4 140 aa8.38□□□□□ -1.07
VTI1A-205ENST00000483122 FAM19A1Q7Z5A9 133 aa8.38□□□□□ -1.07
VTI1A-205ENST00000483122 RPL36ALQ969Q0 106 aaKnown RBP8.38□□□□□ -1.07
VTI1A-205ENST00000483122 UTP20O75691 2785 aaKnown RBP8.38□□□□□ -1.07
VTI1A-205ENST00000483122 PSMB8P28062 276 aa8.37□□□□□ -1.07
VTI1A-205ENST00000483122 CCL18P55774 89 aa8.37□□□□□ -1.07
VTI1A-205ENST00000483122 C11orf72Q8NBR9 251 aa8.37□□□□□ -1.07
VTI1A-205ENST00000483122 CDC42SE2Q9NRR3 84 aa8.37□□□□□ -1.07
VTI1A-205ENST00000483122 TOMM7Q9P0U1 55 aa8.37□□□□□ -1.07
VTI1A-205ENST00000483122 CCKP06307 115 aa8.36□□□□□ -1.07
VTI1A-205ENST00000483122 LINC00158P58513 81 aa8.36□□□□□ -1.07
VTI1A-205ENST00000483122 C20orf197Q8N268 126 aa8.36□□□□□ -1.07
VTI1A-205ENST00000483122 FASNP49327 2511 aaKnown RBP8.36□□□□□ -1.07
VTI1A-205ENST00000483122 NDUFC2O95298 119 aa8.35□□□□□ -1.07
VTI1A-205ENST00000483122 COX7B2Q8TF08 81 aa8.35□□□□□ -1.07
VTI1A-205ENST00000483122 TMEM243Q9BU79 118 aa8.35□□□□□ -1.07
VTI1A-205ENST00000483122 NDUFC2-KCTD14E9PQ53 114 aa8.34□□□□□ -1.07
VTI1A-205ENST00000483122 PFN2P35080 140 aa8.34□□□□□ -1.07
VTI1A-205ENST00000483122 ENHOQ6UWT2 76 aa8.34□□□□□ -1.07
VTI1A-205ENST00000483122 CCL19Q99731 98 aa8.34□□□□□ -1.07
VTI1A-205ENST00000483122 ORMDL1Q9P0S3 153 aa8.34□□□□□ -1.07
VTI1A-205ENST00000483122 FAM236DA0A1B0GTK5 79 aa8.33□□□□□ -1.08
VTI1A-205ENST00000483122 TMEM89A2RUT3 159 aa8.33□□□□□ -1.08
VTI1A-205ENST00000483122 FAM236CP0DP71 79 aa8.33□□□□□ -1.08
VTI1A-205ENST00000483122 XCL1P47992 114 aa8.33□□□□□ -1.08
VTI1A-205ENST00000483122 MRAPQ8TCY5 172 aa8.33□□□□□ -1.08
VTI1A-205ENST00000483122 XCL2Q9UBD3 114 aa8.33□□□□□ -1.08
VTI1A-205ENST00000483122 PTPN13Q12923 2485 aa8.32□□□□□ -1.08
VTI1A-205ENST00000483122 A8MTW9 85 aa8.32□□□□□ -1.08
VTI1A-205ENST00000483122 PAX4O43316 350 aa8.32□□□□□ -1.08
VTI1A-205ENST00000483122 IGHV4-61A0A0C4DH41 118 aa8.31□□□□□ -1.08
VTI1A-205ENST00000483122 IGKV3OR2-268A0A0C4DH90 116 aa8.31□□□□□ -1.08
VTI1A-205ENST00000483122 KRTAP10-9P60411 292 aa8.31□□□□□ -1.08
VTI1A-205ENST00000483122 LINC00336Q6ZUF6 198 aa8.31□□□□□ -1.08
VTI1A-205ENST00000483122 EPM2AB3EWF7 344 aa8.3□□□□□ -1.08
VTI1A-205ENST00000483122 S100A7L2Q5SY68 101 aa8.3□□□□□ -1.08
VTI1A-205ENST00000483122 CRYBG3Q68DQ2 2970 aa8.3□□□□□ -1.08
VTI1A-205ENST00000483122 TRGV1A0A0A0MS02 117 aa8.29□□□□□ -1.08
VTI1A-205ENST00000483122 H7BZZ5 65 aa8.29□□□□□ -1.08
VTI1A-205ENST00000483122 K7EQD1 137 aa8.29□□□□□ -1.08
VTI1A-205ENST00000483122 ATP5EP2Q5VTU8 51 aa8.29□□□□□ -1.08
VTI1A-205ENST00000483122 LYPD5Q6UWN5 251 aa8.29□□□□□ -1.08
VTI1A-205ENST00000483122 SERP1Q9Y6X1 66 aa8.29□□□□□ -1.08
VTI1A-205ENST00000483122 TRBV6-4A0A1B0GX49 114 aa8.28□□□□□ -1.08
VTI1A-205ENST00000483122 UBE2L6O14933 153 aa8.28□□□□□ -1.08
VTI1A-205ENST00000483122 CREBBPQ92793 2442 aa8.28□□□□□ -1.08
VTI1A-205ENST00000483122 CELSR2Q9HCU4 2923 aa8.28□□□□□ -1.08
VTI1A-205ENST00000483122 FBN2P35556 2912 aa8.28□□□□□ -1.08
VTI1A-205ENST00000483122 NBPF19A0A087WUL8 3843 aa8.27□□□□□ -1.08
VTI1A-205ENST00000483122 LY6G6DO95868 133 aa8.27□□□□□ -1.09
VTI1A-205ENST00000483122 AVPP01185 164 aa8.27□□□□□ -1.09
VTI1A-205ENST00000483122 IGHV4-59P01825 116 aa8.27□□□□□ -1.09
VTI1A-205ENST00000483122 SLURP1P55000 103 aa8.27□□□□□ -1.09
VTI1A-205ENST00000483122 LINC00167Q96N53 147 aa8.27□□□□□ -1.09
VTI1A-205ENST00000483122 IBA57-AS1B1ANH7 110 aa8.27□□□□□ -1.09
VTI1A-205ENST00000483122 JMJD7-PLA2G4BH0Y9G9 81 aa8.27□□□□□ -1.09
VTI1A-205ENST00000483122 INSP01308 110 aa8.27□□□□□ -1.09
VTI1A-205ENST00000483122 DEFB136Q30KP8 78 aa8.27□□□□□ -1.09
VTI1A-205ENST00000483122 DEFB113Q30KQ7 82 aa8.27□□□□□ -1.09
VTI1A-205ENST00000483122 Q6ZTI0 123 aa8.27□□□□□ -1.09
VTI1A-205ENST00000483122 C11orf68Q9H3H3 251 aaKnown RBP8.27□□□□□ -1.09
VTI1A-205ENST00000483122 PRO0628Q9UI54 55 aa8.27□□□□□ -1.09
VTI1A-205ENST00000483122 C18orf65Q6ZTR6 163 aa8.26□□□□□ -1.09
VTI1A-205ENST00000483122 MAP6D1Q9H9H5 199 aa8.26□□□□□ -1.09
VTI1A-205ENST00000483122 A0A096LNT2 108 aa8.25□□□□□ -1.09
VTI1A-205ENST00000483122 UBE2E2Q96LR5 201 aa8.25□□□□□ -1.09
VTI1A-205ENST00000483122 RNASE1P07998 156 aaKnown RBP8.25□□□□□ -1.09
VTI1A-205ENST00000483122 Q8N814 137 aa8.25□□□□□ -1.09
VTI1A-205ENST00000483122 UBL5Q9BZL1 73 aa8.25□□□□□ -1.09
VTI1A-205ENST00000483122 C2CD3Q4AC94 2353 aa8.25□□□□□ -1.09
VTI1A-205ENST00000483122 TRBV10-1A0A0K0K1A3 114 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms