RNA–Protein interactions for RNA: ENST00000483117.1

LAPTM4A-202, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

TSL 2

Gene LAPTM4A, Length 487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-202ENST00000483117 PDCD5O14737 125 aa1.1□□□□□ -2.23
LAPTM4A-202ENST00000483117 ARMS2P0C7Q2 107 aa1.1□□□□□ -2.23
LAPTM4A-202ENST00000483117 IGLC2P0DOY2 106 aa1.1□□□□□ -2.23
LAPTM4A-202ENST00000483117 IGLC3P0DOY3 106 aa1.1□□□□□ -2.23
LAPTM4A-202ENST00000483117 ZNF137PP52743 207 aa1.1□□□□□ -2.23
LAPTM4A-202ENST00000483117 KRTAP21-3Q3LHN1 58 aa1.1□□□□□ -2.23
LAPTM4A-202ENST00000483117 BVES-AS1Q5T3Y7 98 aa1.1□□□□□ -2.23
LAPTM4A-202ENST00000483117 SFTA2Q6UW10 78 aa1.1□□□□□ -2.23
LAPTM4A-202ENST00000483117 BAHCC1Q9P281 2608 aa1.09□□□□□ -2.23
LAPTM4A-202ENST00000483117 SNRNP200O75643 2136 aaKnown RBP1.09□□□□□ -2.23
LAPTM4A-202ENST00000483117 LOC285556D6RIA3 1793 aa1.09□□□□□ -2.23
LAPTM4A-202ENST00000483117 C7orf77A4D0Y5 90 aa1.09□□□□□ -2.23
LAPTM4A-202ENST00000483117 F8WEM9 126 aa1.09□□□□□ -2.23
LAPTM4A-202ENST00000483117 KRTAP12-1P59990 96 aa1.09□□□□□ -2.23
LAPTM4A-202ENST00000483117 WFDC2Q14508 124 aa1.09□□□□□ -2.23
LAPTM4A-202ENST00000483117 TMEM263Q8WUH6 116 aaKnown RBP1.09□□□□□ -2.23
LAPTM4A-202ENST00000483117 PLAC4Q8WY50 150 aa1.09□□□□□ -2.23
LAPTM4A-202ENST00000483117 SPRR4Q96PI1 79 aa1.09□□□□□ -2.23
LAPTM4A-202ENST00000483117 KIF21AQ7Z4S6 1674 aa1.09□□□□□ -2.24
LAPTM4A-202ENST00000483117 LRRC37A2A6NM11 1700 aa1.09□□□□□ -2.24
LAPTM4A-202ENST00000483117 TET1Q8NFU7 2136 aa1.09□□□□□ -2.24
LAPTM4A-202ENST00000483117 MED13Q9UHV7 2174 aa1.08□□□□□ -2.24
LAPTM4A-202ENST00000483117 LEPROTL1O95214 131 aa1.08□□□□□ -2.24
LAPTM4A-202ENST00000483117 RPL37P61927 97 aaKnown RBP1.08□□□□□ -2.24
LAPTM4A-202ENST00000483117 PRR15LQ9BU68 103 aa1.08□□□□□ -2.24
LAPTM4A-202ENST00000483117 ARFGEF1Q9Y6D6 1849 aa1.08□□□□□ -2.24
LAPTM4A-202ENST00000483117 PI4KAP42356 2102 aa1.07□□□□□ -2.24
LAPTM4A-202ENST00000483117 INTS1Q8N201 2190 aaKnown RBP1.07□□□□□ -2.24
LAPTM4A-202ENST00000483117 TENM1Q9UKZ4 2725 aa1.07□□□□□ -2.24
LAPTM4A-202ENST00000483117 ZMYM4Q5VZL5 1548 aa1.07□□□□□ -2.24
LAPTM4A-202ENST00000483117 MYMXA0A1B0GTQ4 84 aa1.07□□□□□ -2.24
LAPTM4A-202ENST00000483117 D6R8Y8 96 aa1.07□□□□□ -2.24
LAPTM4A-202ENST00000483117 H3BUT2 72 aa1.07□□□□□ -2.24
LAPTM4A-202ENST00000483117 GCHFRP30047 84 aa1.07□□□□□ -2.24
LAPTM4A-202ENST00000483117 PLGLAQ15195 96 aa1.07□□□□□ -2.24
LAPTM4A-202ENST00000483117 MUSTN1Q8IVN3 82 aa1.07□□□□□ -2.24
LAPTM4A-202ENST00000483117 C18orf32Q8TCD1 76 aa1.07□□□□□ -2.24
LAPTM4A-202ENST00000483117 PROK2Q9HC23 129 aa1.07□□□□□ -2.24
LAPTM4A-202ENST00000483117 KIF20BQ96Q89 1820 aa1.07□□□□□ -2.24
LAPTM4A-202ENST00000483117 ABCA8O94911 1581 aa1.07□□□□□ -2.24
LAPTM4A-202ENST00000483117 DNMBPQ6XZF7 1577 aa1.07□□□□□ -2.24
LAPTM4A-202ENST00000483117 ABCA4P78363 2273 aa1.06□□□□□ -2.24
LAPTM4A-202ENST00000483117 IFT172Q9UG01 1749 aa1.06□□□□□ -2.24
LAPTM4A-202ENST00000483117 MAP2P11137 1827 aaKnown RBP1.06□□□□□ -2.24
LAPTM4A-202ENST00000483117 NEXMIFQ5QGS0 1516 aa1.06□□□□□ -2.24
LAPTM4A-202ENST00000483117 GVQW2A0A096LPI5 108 aaPredicted RBP1.06□□□□□ -2.24
LAPTM4A-202ENST00000483117 CEBPZOSA8MTT3 80 aa1.06□□□□□ -2.24
LAPTM4A-202ENST00000483117 C10orf142B7Z368 130 aa1.06□□□□□ -2.24
LAPTM4A-202ENST00000483117 CFDP00746 253 aaPredicted RBP1.06□□□□□ -2.24
LAPTM4A-202ENST00000483117 ANGP03950 147 aaKnown RBP1.06□□□□□ -2.24
LAPTM4A-202ENST00000483117 DEFA5Q01523 94 aa1.06□□□□□ -2.24
LAPTM4A-202ENST00000483117 Q6ZRX8 168 aa1.06□□□□□ -2.24
LAPTM4A-202ENST00000483117 PSENENQ9NZ42 101 aa1.06□□□□□ -2.24
LAPTM4A-202ENST00000483117 CLIP1P30622 1438 aa1.06□□□□□ -2.24
LAPTM4A-202ENST00000483117 BTAF1O14981 1849 aa1.05□□□□□ -2.24
LAPTM4A-202ENST00000483117 DLG5Q8TDM6 1919 aa1.05□□□□□ -2.24
LAPTM4A-202ENST00000483117 SCN7AQ01118 1682 aa1.05□□□□□ -2.24
LAPTM4A-202ENST00000483117 IQCF6A8MYZ5 107 aa1.05□□□□□ -2.24
LAPTM4A-202ENST00000483117 K7EIL1 84 aa1.05□□□□□ -2.24
LAPTM4A-202ENST00000483117 M0R3E3 92 aa1.05□□□□□ -2.24
LAPTM4A-202ENST00000483117 S100A3P33764 101 aa1.05□□□□□ -2.24
LAPTM4A-202ENST00000483117 DEFB121Q5J5C9 76 aa1.05□□□□□ -2.24
LAPTM4A-202ENST00000483117 ATP5EP2Q5VTU8 51 aa1.05□□□□□ -2.24
LAPTM4A-202ENST00000483117 LINC00472Q9H8W2 130 aa1.05□□□□□ -2.24
LAPTM4A-202ENST00000483117 NUP188Q5SRE5 1749 aa1.05□□□□□ -2.24
LAPTM4A-202ENST00000483117 PDCD11Q14690 1871 aaKnown RBP1.05□□□□□ -2.24
LAPTM4A-202ENST00000483117 NKTRP30414 1462 aaKnown RBP1.05□□□□□ -2.24
LAPTM4A-202ENST00000483117 UBR1Q8IWV7 1749 aa1.04□□□□□ -2.24
LAPTM4A-202ENST00000483117 A0A087WVE0 104 aa1.04□□□□□ -2.24
LAPTM4A-202ENST00000483117 UMAD1C9J7I0 102 aa1.04□□□□□ -2.24
LAPTM4A-202ENST00000483117 H0Y9P7 68 aa1.04□□□□□ -2.24
LAPTM4A-202ENST00000483117 SMIM13P0DJ93 91 aa1.04□□□□□ -2.24
LAPTM4A-202ENST00000483117 ARL14EPLP0DKL9 152 aa1.04□□□□□ -2.24
LAPTM4A-202ENST00000483117 SPATA8Q6RVD6 105 aa1.04□□□□□ -2.24
LAPTM4A-202ENST00000483117 UBE2D4Q9Y2X8 147 aa1.04□□□□□ -2.24
LAPTM4A-202ENST00000483117 SPTBP11277 2137 aa1.04□□□□□ -2.24
LAPTM4A-202ENST00000483117 ESPL1Q14674 2120 aa1.04□□□□□ -2.24
LAPTM4A-202ENST00000483117 UGGT2Q9NYU1 1516 aa1.04□□□□□ -2.24
LAPTM4A-202ENST00000483117 CACNA1BQ00975 2339 aa1.04□□□□□ -2.24
LAPTM4A-202ENST00000483117 SHPRHQ149N8 1683 aa1.04□□□□□ -2.24
LAPTM4A-202ENST00000483117 LRRIQ1Q96JM4 1722 aa1.03□□□□□ -2.24
LAPTM4A-202ENST00000483117 TRBV6-1A0A0K0K1D8 114 aa1.03□□□□□ -2.24
LAPTM4A-202ENST00000483117 PLAC8Q9NZF1 115 aa1.03□□□□□ -2.24
LAPTM4A-202ENST00000483117 ATP7BP35670 1465 aa1.03□□□□□ -2.24
LAPTM4A-202ENST00000483117 URB2Q14146 1524 aaKnown RBP1.03□□□□□ -2.24
LAPTM4A-202ENST00000483117 DUOX2Q9NRD8 1548 aa1.03□□□□□ -2.24
LAPTM4A-202ENST00000483117 ALKQ9UM73 1620 aa1.03□□□□□ -2.24
LAPTM4A-202ENST00000483117 SORL1Q92673 2214 aa1.03□□□□□ -2.25
LAPTM4A-202ENST00000483117 A0A1B0GUT8 65 aa1.02□□□□□ -2.25
LAPTM4A-202ENST00000483117 TMEM131LA2VDJ0 1609 aa1.02□□□□□ -2.25
LAPTM4A-202ENST00000483117 G3V318 75 aa1.02□□□□□ -2.25
LAPTM4A-202ENST00000483117 RGPD8O14715 1765 aaPredicted RBP1.02□□□□□ -2.25
LAPTM4A-202ENST00000483117 NDUFB1O75438 58 aa1.02□□□□□ -2.25
LAPTM4A-202ENST00000483117 LY6G6CO95867 125 aa1.02□□□□□ -2.25
LAPTM4A-202ENST00000483117 PRB1P04280 392 aa1.02□□□□□ -2.25
LAPTM4A-202ENST00000483117 LYNX1P0DP58 116 aa1.02□□□□□ -2.25
LAPTM4A-202ENST00000483117 SPINT3P49223 89 aa1.02□□□□□ -2.25
LAPTM4A-202ENST00000483117 ADAMTS12P58397 1594 aa1.02□□□□□ -2.25
LAPTM4A-202ENST00000483117 GNGT1P63211 74 aa1.02□□□□□ -2.25
LAPTM4A-202ENST00000483117 C1orf167Q5SNV9 1468 aa1.02□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 125.1 ms