RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 GTF2H5Q6ZYL4 71 aa4.66□□□□□ -1.66
CSDE1-206ENST00000483030 SPACA4Q8TDM5 124 aa4.66□□□□□ -1.66
CSDE1-206ENST00000483030 C7orf33Q8WU49 177 aa4.66□□□□□ -1.66
CSDE1-206ENST00000483030 FMC1Q96HJ9 113 aa4.66□□□□□ -1.66
CSDE1-206ENST00000483030 AQP10Q96PS8 301 aa4.66□□□□□ -1.66
CSDE1-206ENST00000483030 ZNF471Q9BX82 626 aaPredicted RBP4.66□□□□□ -1.66
CSDE1-206ENST00000483030 PRO0628Q9UI54 55 aa4.66□□□□□ -1.66
CSDE1-206ENST00000483030 VAX2Q9UIW0 290 aa4.66□□□□□ -1.66
CSDE1-206ENST00000483030 TRAV8-4A0A0B4J246 113 aa4.65□□□□□ -1.67
CSDE1-206ENST00000483030 A0A1B0GX51 115 aa4.65□□□□□ -1.67
CSDE1-206ENST00000483030 HMSDA8MTL9 139 aa4.65□□□□□ -1.67
CSDE1-206ENST00000483030 G3V3Q6 166 aa4.65□□□□□ -1.67
CSDE1-206ENST00000483030 P01737 135 aa4.65□□□□□ -1.67
CSDE1-206ENST00000483030 TAL2Q16559 108 aa4.65□□□□□ -1.67
CSDE1-206ENST00000483030 SPANXN1Q5VSR9 72 aa4.65□□□□□ -1.67
CSDE1-206ENST00000483030 RPL7L1Q6DKI1 246 aaKnown RBP4.65□□□□□ -1.67
CSDE1-206ENST00000483030 C20orf203Q8NBC4 194 aa4.65□□□□□ -1.67
CSDE1-206ENST00000483030 OR5A1Q8NGJ0 315 aa4.65□□□□□ -1.67
CSDE1-206ENST00000483030 GTSF1Q8WW33 167 aa4.65□□□□□ -1.67
CSDE1-206ENST00000483030 PLAC8Q9NZF1 115 aa4.65□□□□□ -1.67
CSDE1-206ENST00000483030 KIF25-AS1Q9Y6Z4 181 aa4.65□□□□□ -1.67
CSDE1-206ENST00000483030 IGLV4-60A0A075B6I1 120 aa4.64□□□□□ -1.67
CSDE1-206ENST00000483030 IGHV1-24A0A0C4DH33 117 aa4.64□□□□□ -1.67
CSDE1-206ENST00000483030 GAGE12HA6NDE8 117 aa4.64□□□□□ -1.67
CSDE1-206ENST00000483030 FABP4P15090 132 aa4.64□□□□□ -1.67
CSDE1-206ENST00000483030 SUMO2P61956 95 aaKnown RBP4.64□□□□□ -1.67
CSDE1-206ENST00000483030 COX6A2Q02221 97 aa4.64□□□□□ -1.67
CSDE1-206ENST00000483030 HIST1H2BLQ99880 126 aa4.64□□□□□ -1.67
CSDE1-206ENST00000483030 KRTAP9-8Q9BYQ0 159 aa4.64□□□□□ -1.67
CSDE1-206ENST00000483030 GFRA4Q9GZZ7 299 aa4.64□□□□□ -1.67
CSDE1-206ENST00000483030 TNXBP22105 4242 aa4.64□□□□□ -1.67
CSDE1-206ENST00000483030 IGKV2-24A0A0C4DH68 120 aa4.63□□□□□ -1.67
CSDE1-206ENST00000483030 A0A0J9YXV3 536 aa4.63□□□□□ -1.67
CSDE1-206ENST00000483030 A0A1B0GUV1 79 aa4.63□□□□□ -1.67
CSDE1-206ENST00000483030 CXCL1P09341 107 aa4.63□□□□□ -1.67
CSDE1-206ENST00000483030 OR5AL1P0C617 328 aa4.63□□□□□ -1.67
CSDE1-206ENST00000483030 KRTAP10-8P60410 259 aa4.63□□□□□ -1.67
CSDE1-206ENST00000483030 PRR3P79522 188 aaKnown RBP4.63□□□□□ -1.67
CSDE1-206ENST00000483030 COA6Q5JTJ3 125 aaKnown RBP4.63□□□□□ -1.67
CSDE1-206ENST00000483030 FAM19A5Q7Z5A7 132 aaPredicted RBP4.63□□□□□ -1.67
CSDE1-206ENST00000483030 PRSS3P2Q8NHM4 247 aa4.63□□□□□ -1.67
CSDE1-206ENST00000483030 J3KT08 172 aa4.62□□□□□ -1.67
CSDE1-206ENST00000483030 M0QY20 66 aa4.62□□□□□ -1.67
CSDE1-206ENST00000483030 GAS8-AS1O95177 125 aa4.62□□□□□ -1.67
CSDE1-206ENST00000483030 MGPP08493 103 aa4.62□□□□□ -1.67
CSDE1-206ENST00000483030 ADCYAP1P18509 176 aa4.62□□□□□ -1.67
CSDE1-206ENST00000483030 RPS10P46783 165 aaKnown RBP4.62□□□□□ -1.67
CSDE1-206ENST00000483030 BAGE2Q86Y30 109 aa4.62□□□□□ -1.67
CSDE1-206ENST00000483030 STPG4Q8N801 248 aa4.62□□□□□ -1.67
CSDE1-206ENST00000483030 ANAPC13Q9BS18 74 aa4.62□□□□□ -1.67
CSDE1-206ENST00000483030 TMEM243Q9BU79 118 aa4.62□□□□□ -1.67
CSDE1-206ENST00000483030 IGKV3OR2-268A0A0C4DH90 116 aa4.61□□□□□ -1.67
CSDE1-206ENST00000483030 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.61□□□□□ -1.67
CSDE1-206ENST00000483030 MEF2BQ02080 365 aaPredicted RBP4.61□□□□□ -1.67
CSDE1-206ENST00000483030 HIGD2BQ4VC39 106 aa4.61□□□□□ -1.67
CSDE1-206ENST00000483030 SUMO4Q6EEV6 95 aa4.61□□□□□ -1.67
CSDE1-206ENST00000483030 REG3GQ6UW15 175 aa4.61□□□□□ -1.67
CSDE1-206ENST00000483030 C15orf56Q8N910 161 aa4.61□□□□□ -1.67
CSDE1-206ENST00000483030 TMEM18Q96B42 140 aa4.61□□□□□ -1.67
CSDE1-206ENST00000483030 AP1S3Q96PC3 154 aa4.61□□□□□ -1.67
CSDE1-206ENST00000483030 MLST8Q9BVC4 326 aa4.61□□□□□ -1.67
CSDE1-206ENST00000483030 CYSLTR1Q9Y271 337 aa4.61□□□□□ -1.67
CSDE1-206ENST00000483030 FXYD6-FXYD2A0A087WZ82 144 aa4.6□□□□□ -1.67
CSDE1-206ENST00000483030 H7C1H1 209 aa4.6□□□□□ -1.67
CSDE1-206ENST00000483030 UBE2L6O14933 153 aa4.6□□□□□ -1.67
CSDE1-206ENST00000483030 BATFQ16520 125 aa4.6□□□□□ -1.67
CSDE1-206ENST00000483030 SPINK6Q6UWN8 80 aa4.6□□□□□ -1.67
CSDE1-206ENST00000483030 A0A096LNI7 61 aa4.59□□□□□ -1.67
CSDE1-206ENST00000483030 HIST1H2BKO60814 126 aa4.59□□□□□ -1.67
CSDE1-206ENST00000483030 HIST1H2BJP06899 126 aa4.59□□□□□ -1.67
CSDE1-206ENST00000483030 HIST1H2BOP23527 126 aa4.59□□□□□ -1.67
CSDE1-206ENST00000483030 HIST1H2BBP33778 126 aa4.59□□□□□ -1.67
CSDE1-206ENST00000483030 HIST1H2BDP58876 126 aa4.59□□□□□ -1.67
CSDE1-206ENST00000483030 HIST1H2BCP62807 126 aa4.59□□□□□ -1.67
CSDE1-206ENST00000483030 SRSF9Q13242 221 aaKnown RBP eCLIP4.59□□□□□ -1.67
CSDE1-206ENST00000483030 HIST2H2BEQ16778 126 aa4.59□□□□□ -1.67
CSDE1-206ENST00000483030 C4orf26Q17RF5 130 aa4.59□□□□□ -1.67
CSDE1-206ENST00000483030 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.59□□□□□ -1.67
CSDE1-206ENST00000483030 RASL11AQ6T310 242 aa4.59□□□□□ -1.67
CSDE1-206ENST00000483030 HIST1H2BHQ93079 126 aa4.59□□□□□ -1.67
CSDE1-206ENST00000483030 YPEL4Q96NS1 127 aa4.59□□□□□ -1.67
CSDE1-206ENST00000483030 HIST1H2BNQ99877 126 aa4.59□□□□□ -1.67
CSDE1-206ENST00000483030 HIST1H2BMQ99879 126 aa4.59□□□□□ -1.67
CSDE1-206ENST00000483030 UQCR10Q9UDW1 63 aa4.59□□□□□ -1.67
CSDE1-206ENST00000483030 A0A1B0GV50 99 aa4.58□□□□□ -1.68
CSDE1-206ENST00000483030 RPL13AP40429 203 aaKnown RBP4.58□□□□□ -1.68
CSDE1-206ENST00000483030 C1orf195Q5TG92 126 aa4.58□□□□□ -1.68
CSDE1-206ENST00000483030 TEX43Q6ZNM6 134 aa4.58□□□□□ -1.68
CSDE1-206ENST00000483030 FAM19A1Q7Z5A9 133 aa4.58□□□□□ -1.68
CSDE1-206ENST00000483030 GATD1Q8NB37 220 aa4.58□□□□□ -1.68
CSDE1-206ENST00000483030 MBD3L1Q8WWY6 194 aa4.58□□□□□ -1.68
CSDE1-206ENST00000483030 CHCHD10Q8WYQ3 142 aaPredicted RBP4.58□□□□□ -1.68
CSDE1-206ENST00000483030 PGLYRP4Q96LB8 373 aa4.58□□□□□ -1.68
CSDE1-206ENST00000483030 RPS10P5Q9NQ39 176 aa4.58□□□□□ -1.68
CSDE1-206ENST00000483030 CYTL1Q9NRR1 136 aa4.58□□□□□ -1.68
CSDE1-206ENST00000483030 GVQW2A0A096LPI5 108 aaPredicted RBP4.57□□□□□ -1.68
CSDE1-206ENST00000483030 C7orf77A4D0Y5 90 aa4.57□□□□□ -1.68
CSDE1-206ENST00000483030 PRYO14603 147 aa4.57□□□□□ -1.68
CSDE1-206ENST00000483030 IGLC6P0CF74 106 aa4.57□□□□□ -1.68
CSDE1-206ENST00000483030 CACNG7P62955 275 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms