RNA–Protein interactions for RNA: ENST00000481929.5

HDAC6-224, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-224ENST00000481929 TRBV30A0A0K0K1B3 111 aa8.63□□□□□ -1.03
HDAC6-224ENST00000481929 VCYO14598 125 aa8.63□□□□□ -1.03
HDAC6-224ENST00000481929 PDE6DO43924 150 aa8.63□□□□□ -1.03
HDAC6-224ENST00000481929 KRTAP13-2Q52LG2 175 aa8.63□□□□□ -1.03
HDAC6-224ENST00000481929 ANAPC11Q9NYG5 84 aa8.63□□□□□ -1.03
HDAC6-224ENST00000481929 LBHQ53QV2 105 aaPredicted RBP8.62□□□□□ -1.03
HDAC6-224ENST00000481929 TMEM18Q96B42 140 aa8.62□□□□□ -1.03
HDAC6-224ENST00000481929 TIMM21Q9BVV7 248 aa8.62□□□□□ -1.03
HDAC6-224ENST00000481929 PACRGQ96M98 296 aaPredicted RBP8.61□□□□□ -1.03
HDAC6-224ENST00000481929 KIR2DL4Q99706 377 aa8.61□□□□□ -1.03
HDAC6-224ENST00000481929 C22orf24Q9Y442 160 aa8.61□□□□□ -1.03
HDAC6-224ENST00000481929 BCE1O60756 84 aa8.6□□□□□ -1.03
HDAC6-224ENST00000481929 CTAG1AP78358 180 aa8.6□□□□□ -1.03
HDAC6-224ENST00000481929 BORCS7Q96B45 105 aa8.6□□□□□ -1.03
HDAC6-224ENST00000481929 K7EN84 100 aa8.59□□□□□ -1.03
HDAC6-224ENST00000481929 KIAA0087Q14695 138 aa8.59□□□□□ -1.03
HDAC6-224ENST00000481929 ASB16-AS1Q495Z4 193 aa8.59□□□□□ -1.03
HDAC6-224ENST00000481929 TMEM191AQ9H0A3 160 aa8.59□□□□□ -1.03
HDAC6-224ENST00000481929 TGIF2-C20orf24A0A0A6YYL0 155 aa8.58□□□□□ -1.04
HDAC6-224ENST00000481929 A0A1B0GVG6 124 aa8.58□□□□□ -1.04
HDAC6-224ENST00000481929 RAB4AP20338 218 aa8.58□□□□□ -1.04
HDAC6-224ENST00000481929 RGS21Q2M5E4 152 aa8.58□□□□□ -1.04
HDAC6-224ENST00000481929 FAM229BQ4G0N7 80 aa8.58□□□□□ -1.04
HDAC6-224ENST00000481929 C2orf82Q6UX34 121 aa8.58□□□□□ -1.04
HDAC6-224ENST00000481929 LINC00337Q8N6G1 96 aa8.58□□□□□ -1.04
HDAC6-224ENST00000481929 IFITM10A6NMD0 228 aa8.57□□□□□ -1.04
HDAC6-224ENST00000481929 A8MWL6 223 aa8.57□□□□□ -1.04
HDAC6-224ENST00000481929 TEX46H3BTG2 121 aa8.57□□□□□ -1.04
HDAC6-224ENST00000481929 GATCO43716 136 aaKnown RBP8.57□□□□□ -1.04
HDAC6-224ENST00000481929 SUMO2P61956 95 aaKnown RBP8.57□□□□□ -1.04
HDAC6-224ENST00000481929 ZNF345Q14585 488 aa8.57□□□□□ -1.04
HDAC6-224ENST00000481929 LINC00242Q5T6M2 205 aa8.57□□□□□ -1.04
HDAC6-224ENST00000481929 IGKV2D-26A0A0A0MRZ7 120 aa8.56□□□□□ -1.04
HDAC6-224ENST00000481929 SMKR1H3BMG3 65 aa8.56□□□□□ -1.04
HDAC6-224ENST00000481929 PPP1R17O96001 155 aa8.56□□□□□ -1.04
HDAC6-224ENST00000481929 HBBP68871 147 aa8.56□□□□□ -1.04
HDAC6-224ENST00000481929 AMN1Q8IY45 258 aa8.56□□□□□ -1.04
HDAC6-224ENST00000481929 OCC1Q8TAD7 63 aa8.56□□□□□ -1.04
HDAC6-224ENST00000481929 KRTAP4-1Q9BYQ7 146 aa8.56□□□□□ -1.04
HDAC6-224ENST00000481929 MRPL55Q7Z7F7 128 aaKnown RBP8.55□□□□□ -1.04
HDAC6-224ENST00000481929 LINC00469Q8N7U9 141 aa8.55□□□□□ -1.04
HDAC6-224ENST00000481929 A0A1B0GUT8 65 aa8.54□□□□□ -1.04
HDAC6-224ENST00000481929 ZNF727A8MUV8 499 aa8.54□□□□□ -1.04
HDAC6-224ENST00000481929 RPL39P62891 51 aaKnown RBP8.54□□□□□ -1.04
HDAC6-224ENST00000481929 FAM104AQ969W3 186 aa8.54□□□□□ -1.04
HDAC6-224ENST00000481929 XAGE1AQ9HD64 81 aa8.54□□□□□ -1.04
HDAC6-224ENST00000481929 SPANXA1Q9NS26 97 aa8.54□□□□□ -1.04
HDAC6-224ENST00000481929 TP73-AS1Q9UF72 201 aa8.54□□□□□ -1.04
HDAC6-224ENST00000481929 KANTRA0A1W2PQU2 76 aa8.53□□□□□ -1.04
HDAC6-224ENST00000481929 PPP1R2P9O14990 202 aa8.53□□□□□ -1.04
HDAC6-224ENST00000481929 SEC61BP60468 96 aaKnown RBP8.53□□□□□ -1.04
HDAC6-224ENST00000481929 MRPS36P82909 103 aaKnown RBP8.53□□□□□ -1.04
HDAC6-224ENST00000481929 NRACQ8N912 160 aa8.53□□□□□ -1.04
HDAC6-224ENST00000481929 SMLR1H3BR10 107 aa8.52□□□□□ -1.05
HDAC6-224ENST00000481929 UBE2AP49459 152 aa8.52□□□□□ -1.05
HDAC6-224ENST00000481929 CT83Q5H943 113 aa8.52□□□□□ -1.05
HDAC6-224ENST00000481929 FAM231DQ6ZW35 169 aa8.52□□□□□ -1.05
HDAC6-224ENST00000481929 FP248Q71RG6 208 aaPredicted RBP8.52□□□□□ -1.05
HDAC6-224ENST00000481929 TCAPO15273 167 aa8.51□□□□□ -1.05
HDAC6-224ENST00000481929 hCG_2014768A0A024R1R8 64 aa8.5□□□□□ -1.05
HDAC6-224ENST00000481929 HIGD1CA8MV81 97 aa8.5□□□□□ -1.05
HDAC6-224ENST00000481929 KRTAP13-3Q3SY46 172 aa8.5□□□□□ -1.05
HDAC6-224ENST00000481929 RPL37AP8A6NKH3 93 aa8.49□□□□□ -1.05
HDAC6-224ENST00000481929 PRSS2P07478 247 aa8.49□□□□□ -1.05
HDAC6-224ENST00000481929 KRTAP13-1Q8IUC0 172 aa8.49□□□□□ -1.05
HDAC6-224ENST00000481929 CKS1BP61024 79 aa8.48□□□□□ -1.05
HDAC6-224ENST00000481929 LINC00167Q96N53 147 aa8.48□□□□□ -1.05
HDAC6-224ENST00000481929 CFC1BP0CG36 223 aa8.47□□□□□ -1.05
HDAC6-224ENST00000481929 TAGLN2P37802 199 aaKnown RBP8.47□□□□□ -1.05
HDAC6-224ENST00000481929 LINC01561Q8N1V8 128 aa8.47□□□□□ -1.05
HDAC6-224ENST00000481929 C20orf78Q9BR46 151 aa8.47□□□□□ -1.05
HDAC6-224ENST00000481929 TOMM7Q9P0U1 55 aa8.47□□□□□ -1.05
HDAC6-224ENST00000481929 GAGE10A6NGK3 116 aa8.46□□□□□ -1.06
HDAC6-224ENST00000481929 HMSDA8MTL9 139 aa8.46□□□□□ -1.06
HDAC6-224ENST00000481929 RPL32P62910 135 aaKnown RBP8.46□□□□□ -1.06
HDAC6-224ENST00000481929 RIGQ13278 110 aa8.46□□□□□ -1.06
HDAC6-224ENST00000481929 LCE2CQ5TA81 110 aa8.46□□□□□ -1.06
HDAC6-224ENST00000481929 SPAG11AQ6PDA7 123 aa8.46□□□□□ -1.06
HDAC6-224ENST00000481929 C6orf226Q5I0X4 101 aa8.45□□□□□ -1.06
HDAC6-224ENST00000481929 KRTAP9-7A8MTY7 169 aa8.44□□□□□ -1.06
HDAC6-224ENST00000481929 IFI27P40305 119 aaPredicted RBP8.44□□□□□ -1.06
HDAC6-224ENST00000481929 MRPL51Q4U2R6 128 aaKnown RBP8.44□□□□□ -1.06
HDAC6-224ENST00000481929 C3orf22Q8N5N4 141 aa8.44□□□□□ -1.06
HDAC6-224ENST00000481929 SMIM2Q9BVW6 85 aa8.44□□□□□ -1.06
HDAC6-224ENST00000481929 TRBV24-1A0A075B6N3 115 aa8.43□□□□□ -1.06
HDAC6-224ENST00000481929 Q6ZN92 141 aa8.43□□□□□ -1.06
HDAC6-224ENST00000481929 Q8IZM0 81 aa8.43□□□□□ -1.06
HDAC6-224ENST00000481929 LINC00862A6NCI5 91 aa8.42□□□□□ -1.06
HDAC6-224ENST00000481929 PNRC1Q12796 327 aaPredicted RBP8.42□□□□□ -1.06
HDAC6-224ENST00000481929 FAM104BQ5XKR9 115 aa8.42□□□□□ -1.06
HDAC6-224ENST00000481929 IGLV4-3A0A075B6K6 122 aa8.41□□□□□ -1.06
HDAC6-224ENST00000481929 TMEM250H0YL14 139 aa8.41□□□□□ -1.06
HDAC6-224ENST00000481929 CKS2P33552 79 aa8.41□□□□□ -1.06
HDAC6-224ENST00000481929 MT1HP80294 61 aa8.41□□□□□ -1.06
HDAC6-224ENST00000481929 C4orf48Q5BLP8 95 aa8.41□□□□□ -1.06
HDAC6-224ENST00000481929 TMEM141Q96I45 108 aa8.41□□□□□ -1.06
HDAC6-224ENST00000481929 ALKBH7Q9BT30 221 aaPredicted RBP8.41□□□□□ -1.06
HDAC6-224ENST00000481929 F8VRH5 84 aa8.4□□□□□ -1.06
HDAC6-224ENST00000481929 TNFRSF6BO95407 300 aa8.4□□□□□ -1.06
HDAC6-224ENST00000481929 PRLHP81277 87 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms