RNA–Protein interactions for RNA: ENST00000481484.1

VPS13D-208, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 360 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-208ENST00000481484 POLR2KP53803 58 aaKnown RBP2.61□□□□□ -1.99
VPS13D-208ENST00000481484 SYCNQ0VAF6 134 aa2.61□□□□□ -1.99
VPS13D-208ENST00000481484 SPINK6Q6UWN8 80 aa2.61□□□□□ -1.99
VPS13D-208ENST00000481484 Q6ZRP5 223 aa2.61□□□□□ -1.99
VPS13D-208ENST00000481484 ATP5L2Q7Z4Y8 100 aa2.61□□□□□ -1.99
VPS13D-208ENST00000481484 ZNF664Q8N3J9 261 aa2.61□□□□□ -1.99
VPS13D-208ENST00000481484 STPG4Q8N801 248 aa2.61□□□□□ -1.99
VPS13D-208ENST00000481484 DPH3Q96FX2 82 aa2.61□□□□□ -1.99
VPS13D-208ENST00000481484 C2orf48Q96LS8 159 aa2.61□□□□□ -1.99
VPS13D-208ENST00000481484 C20orf78Q9BR46 151 aa2.61□□□□□ -1.99
VPS13D-208ENST00000481484 EIF5A2Q9GZV4 153 aaKnown RBP2.61□□□□□ -1.99
VPS13D-208ENST00000481484 CDC42SE2Q9NRR3 84 aa2.61□□□□□ -1.99
VPS13D-208ENST00000481484 TRBV24-1A0A075B6N3 115 aa2.6□□□□□ -1.99
VPS13D-208ENST00000481484 A0A096LNI7 61 aa2.6□□□□□ -1.99
VPS13D-208ENST00000481484 F8W036 122 aa2.6□□□□□ -1.99
VPS13D-208ENST00000481484 PPBPP02775 128 aa2.6□□□□□ -1.99
VPS13D-208ENST00000481484 MT1HL1P0DM35 61 aa2.6□□□□□ -1.99
VPS13D-208ENST00000481484 RAB4AP20338 218 aa2.6□□□□□ -1.99
VPS13D-208ENST00000481484 HNRNPA3P51991 378 aaKnown RBP2.6□□□□□ -1.99
VPS13D-208ENST00000481484 CEBPGP53567 150 aa2.6□□□□□ -1.99
VPS13D-208ENST00000481484 HBBP68871 147 aa2.6□□□□□ -1.99
VPS13D-208ENST00000481484 MRPS36P82909 103 aaKnown RBP2.6□□□□□ -1.99
VPS13D-208ENST00000481484 SPAG11BQ08648 103 aa2.6□□□□□ -1.99
VPS13D-208ENST00000481484 LINC01600Q96MT4 127 aa2.6□□□□□ -1.99
VPS13D-208ENST00000481484 CAMK2N2Q96S95 79 aa2.6□□□□□ -1.99
VPS13D-208ENST00000481484 NAT8Q9UHE5 227 aa2.6□□□□□ -1.99
VPS13D-208ENST00000481484 LAMTOR2Q9Y2Q5 125 aa2.6□□□□□ -1.99
VPS13D-208ENST00000481484 V9GYV3 84 aa2.6□□□□□ -1.99
VPS13D-208ENST00000481484 TGIF2-C20orf24A0A0A6YYL0 155 aa2.59□□□□□ -1.99
VPS13D-208ENST00000481484 A0A0J9YXV3 536 aa2.59□□□□□ -1.99
VPS13D-208ENST00000481484 K7EMI3 77 aa2.59□□□□□ -1.99
VPS13D-208ENST00000481484 NDUFA1O15239 70 aa2.59□□□□□ -1.99
VPS13D-208ENST00000481484 SRP19P09132 144 aaKnown RBP2.59□□□□□ -1.99
VPS13D-208ENST00000481484 NPSP0C0P6 89 aa2.59□□□□□ -1.99
VPS13D-208ENST00000481484 PEA15Q15121 130 aa2.59□□□□□ -1.99
VPS13D-208ENST00000481484 ADIRFQ15847 76 aa2.59□□□□□ -1.99
VPS13D-208ENST00000481484 TMEM241Q24JQ0 296 aa2.59□□□□□ -1.99
VPS13D-208ENST00000481484 FAM104BQ5XKR9 115 aa2.59□□□□□ -1.99
VPS13D-208ENST00000481484 Q6ZUT4 128 aa2.59□□□□□ -1.99
VPS13D-208ENST00000481484 AMN1Q8IY45 258 aa2.59□□□□□ -1.99
VPS13D-208ENST00000481484 NRACQ8N912 160 aa2.59□□□□□ -1.99
VPS13D-208ENST00000481484 NUP35Q8NFH5 326 aa2.59□□□□□ -1.99
VPS13D-208ENST00000481484 PRSS3P2Q8NHM4 247 aa2.59□□□□□ -1.99
VPS13D-208ENST00000481484 IMMP2LQ96T52 175 aa2.59□□□□□ -1.99
VPS13D-208ENST00000481484 SMIM2Q9BVW6 85 aa2.59□□□□□ -1.99
VPS13D-208ENST00000481484 MRPL35Q9NZE8 188 aaKnown RBP2.59□□□□□ -1.99
VPS13D-208ENST00000481484 UBE2D4Q9Y2X8 147 aa2.59□□□□□ -1.99
VPS13D-208ENST00000481484 TRAV13-1A0A0B4J241 112 aa2.58□□□□□ -2
VPS13D-208ENST00000481484 SMIM27A0A1W2PRY6 76 aa2.58□□□□□ -2
VPS13D-208ENST00000481484 IFITM10A6NMD0 228 aa2.58□□□□□ -2
VPS13D-208ENST00000481484 MT-ND6P03923 174 aa2.58□□□□□ -2
VPS13D-208ENST00000481484 TLX1NBP0CAT3 122 aa2.58□□□□□ -2
VPS13D-208ENST00000481484 CKS2P33552 79 aa2.58□□□□□ -2
VPS13D-208ENST00000481484 IFI27P40305 119 aaPredicted RBP2.58□□□□□ -2
VPS13D-208ENST00000481484 RPL23P62829 140 aaKnown RBP2.58□□□□□ -2
VPS13D-208ENST00000481484 RPL18AQ02543 176 aaKnown RBP2.58□□□□□ -2
VPS13D-208ENST00000481484 PNRC1Q12796 327 aaPredicted RBP2.58□□□□□ -2
VPS13D-208ENST00000481484 PAPPA-AS1Q5QFB9 102 aa2.58□□□□□ -2
VPS13D-208ENST00000481484 ORMDL3Q8N138 153 aa2.58□□□□□ -2
VPS13D-208ENST00000481484 LINC01561Q8N1V8 128 aa2.58□□□□□ -2
VPS13D-208ENST00000481484 C2orf88Q9BSF0 95 aa2.58□□□□□ -2
VPS13D-208ENST00000481484 TRBV30A0A0K0K1B3 111 aa2.57□□□□□ -2
VPS13D-208ENST00000481484 A0A1B0GXF2 115 aa2.57□□□□□ -2
VPS13D-208ENST00000481484 LINC01549A6NIU2 74 aa2.57□□□□□ -2
VPS13D-208ENST00000481484 D6R8Y8 96 aa2.57□□□□□ -2
VPS13D-208ENST00000481484 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.57□□□□□ -2
VPS13D-208ENST00000481484 TNFRSF6BO95407 300 aa2.57□□□□□ -2
VPS13D-208ENST00000481484 RAB5AP20339 215 aa2.57□□□□□ -2
VPS13D-208ENST00000481484 G0S2P27469 103 aa2.57□□□□□ -2
VPS13D-208ENST00000481484 SEC11AP67812 179 aa2.57□□□□□ -2
VPS13D-208ENST00000481484 MRPL51Q4U2R6 128 aaKnown RBP2.57□□□□□ -2
VPS13D-208ENST00000481484 Q6ZN92 141 aa2.57□□□□□ -2
VPS13D-208ENST00000481484 ORAOV1Q8WV07 137 aa2.57□□□□□ -2
VPS13D-208ENST00000481484 DIRC1Q969H9 104 aa2.57□□□□□ -2
VPS13D-208ENST00000481484 TMEM141Q96I45 108 aa2.57□□□□□ -2
VPS13D-208ENST00000481484 PSORS1C2Q9UIG4 136 aa2.57□□□□□ -2
VPS13D-208ENST00000481484 PYGO1Q9Y3Y4 419 aa2.57□□□□□ -2
VPS13D-208ENST00000481484 hCG_2014768A0A024R1R8 64 aa2.56□□□□□ -2
VPS13D-208ENST00000481484 IGLV1-50A0A075B6I6 118 aa2.56□□□□□ -2
VPS13D-208ENST00000481484 A0A087WZ39 114 aa2.56□□□□□ -2
VPS13D-208ENST00000481484 IGHV3OR16-9A0A0B4J2B5 98 aa2.56□□□□□ -2
VPS13D-208ENST00000481484 SMKR1H3BMG3 65 aa2.56□□□□□ -2
VPS13D-208ENST00000481484 GAS8-AS1O95177 125 aa2.56□□□□□ -2
VPS13D-208ENST00000481484 RPL13AP40429 203 aaKnown RBP2.56□□□□□ -2
VPS13D-208ENST00000481484 CXCL5P42830 114 aa2.56□□□□□ -2
VPS13D-208ENST00000481484 GAGE2BQ13066 116 aa2.56□□□□□ -2
VPS13D-208ENST00000481484 ORMDL2Q53FV1 153 aa2.56□□□□□ -2
VPS13D-208ENST00000481484 LCE1AQ5T7P2 110 aa2.56□□□□□ -2
VPS13D-208ENST00000481484 TEX43Q6ZNM6 134 aa2.56□□□□□ -2
VPS13D-208ENST00000481484 Q8N9P0 234 aaPredicted RBP2.56□□□□□ -2
VPS13D-208ENST00000481484 MAP1LC3AQ9H492 121 aa2.56□□□□□ -2
VPS13D-208ENST00000481484 CYSLTR1Q9Y271 337 aa2.56□□□□□ -2
VPS13D-208ENST00000481484 TRAV9-1A0A075B6T8 112 aa2.55□□□□□ -2
VPS13D-208ENST00000481484 PRSS47A8MTI9 375 aa2.55□□□□□ -2
VPS13D-208ENST00000481484 NDUFC2-KCTD14E9PQ53 114 aa2.55□□□□□ -2
VPS13D-208ENST00000481484 M0QXV9 152 aa2.55□□□□□ -2
VPS13D-208ENST00000481484 NUPR1O60356 82 aa2.55□□□□□ -2
VPS13D-208ENST00000481484 NPYP01303 97 aa2.55□□□□□ -2
VPS13D-208ENST00000481484 MT-ND4LP03901 98 aa2.55□□□□□ -2
VPS13D-208ENST00000481484 PRSS2P07478 247 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms