RNA–Protein interactions for RNA: ENST00000481441.1

RXRB-203, Transcript of retinoid X receptor beta, humanhuman

TSL 2

Gene RXRB, Length 1,330 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-203ENST00000481441 ST20Q9HBF5 79 aa10.74□□□□□ -0.69
RXRB-203ENST00000481441 HIGD2BQ4VC39 106 aa10.73□□□□□ -0.69
RXRB-203ENST00000481441 C20orf78Q9BR46 151 aa10.73□□□□□ -0.69
RXRB-203ENST00000481441 GAGE12HA6NDE8 117 aa10.72□□□□□ -0.69
RXRB-203ENST00000481441 SDHAF1A6NFY7 115 aa10.72□□□□□ -0.69
RXRB-203ENST00000481441 PRSS47A8MTI9 375 aa10.71□□□□□ -0.69
RXRB-203ENST00000481441 POLR2KP53803 58 aaKnown RBP10.71□□□□□ -0.69
RXRB-203ENST00000481441 Q6ZRP5 223 aa10.71□□□□□ -0.69
RXRB-203ENST00000481441 SMIM2Q9BVW6 85 aa10.71□□□□□ -0.69
RXRB-203ENST00000481441 IFI27P40305 119 aaPredicted RBP10.7□□□□□ -0.7
RXRB-203ENST00000481441 TMA7Q9Y2S6 64 aaKnown RBP10.7□□□□□ -0.7
RXRB-203ENST00000481441 GVQW2A0A096LPI5 108 aaPredicted RBP10.69□□□□□ -0.7
RXRB-203ENST00000481441 RPL32P62910 135 aaKnown RBP10.69□□□□□ -0.7
RXRB-203ENST00000481441 BAGE3Q86Y29 109 aa10.69□□□□□ -0.7
RXRB-203ENST00000481441 Q8N8P6 123 aa10.69□□□□□ -0.7
RXRB-203ENST00000481441 URB1-AS1Q96HZ7 61 aa10.69□□□□□ -0.7
RXRB-203ENST00000481441 LINC00474Q9P2X8 69 aa10.69□□□□□ -0.7
RXRB-203ENST00000481441 MUC2Q02817 5179 aa10.68□□□□□ -0.7
RXRB-203ENST00000481441 TRBV27A0A0K0K1C4 114 aa10.68□□□□□ -0.7
RXRB-203ENST00000481441 VCYO14598 125 aa10.68□□□□□ -0.7
RXRB-203ENST00000481441 PMCHP20382 165 aa10.68□□□□□ -0.7
RXRB-203ENST00000481441 NDUFA6P56556 154 aa10.68□□□□□ -0.7
RXRB-203ENST00000481441 NXT2Q9NPJ8 142 aaKnown RBP10.68□□□□□ -0.7
RXRB-203ENST00000481441 I3L3M4 83 aa10.67□□□□□ -0.7
RXRB-203ENST00000481441 LINC00310P59036 64 aa10.67□□□□□ -0.7
RXRB-203ENST00000481441 FA2HQ7L5A8 372 aa10.67□□□□□ -0.7
RXRB-203ENST00000481441 TCAPO15273 167 aa10.66□□□□□ -0.7
RXRB-203ENST00000481441 LINC00614P0C842 121 aa10.66□□□□□ -0.7
RXRB-203ENST00000481441 RNASEKQ6P5S7 137 aaKnown RBP10.66□□□□□ -0.7
RXRB-203ENST00000481441 IGKV3OR2-268A0A0C4DH90 116 aa10.65□□□□□ -0.7
RXRB-203ENST00000481441 UBE2L6O14933 153 aa10.65□□□□□ -0.7
RXRB-203ENST00000481441 SERF1AO75920 110 aa10.65□□□□□ -0.7
RXRB-203ENST00000481441 TSHBP01222 138 aa10.65□□□□□ -0.7
RXRB-203ENST00000481441 COA6Q5JTJ3 125 aaKnown RBP10.65□□□□□ -0.7
RXRB-203ENST00000481441 CHCHD10Q8WYQ3 142 aaPredicted RBP10.65□□□□□ -0.7
RXRB-203ENST00000481441 KIR2DL4Q99706 377 aa10.65□□□□□ -0.7
RXRB-203ENST00000481441 NUPR1O60356 82 aa10.64□□□□□ -0.71
RXRB-203ENST00000481441 LINC01546A6NGU7 62 aa10.63□□□□□ -0.71
RXRB-203ENST00000481441 S100A6P06703 90 aa10.63□□□□□ -0.71
RXRB-203ENST00000481441 FCER1GP30273 86 aa10.63□□□□□ -0.71
RXRB-203ENST00000481441 AMTP48728 403 aa10.63□□□□□ -0.71
RXRB-203ENST00000481441 COTL1Q14019 142 aa10.63□□□□□ -0.71
RXRB-203ENST00000481441 CHCHD1Q96BP2 118 aaKnown RBP10.63□□□□□ -0.71
RXRB-203ENST00000481441 PKIGQ9Y2B9 76 aa10.63□□□□□ -0.71
RXRB-203ENST00000481441 K7EMI3 77 aa10.61□□□□□ -0.71
RXRB-203ENST00000481441 FOXI1Q12951 378 aa10.61□□□□□ -0.71
RXRB-203ENST00000481441 ZNF664Q8N3J9 261 aa10.61□□□□□ -0.71
RXRB-203ENST00000481441 HSBP1O75506 76 aa10.6□□□□□ -0.71
RXRB-203ENST00000481441 PMCHL1Q16048 86 aa10.6□□□□□ -0.71
RXRB-203ENST00000481441 ORMDL2Q53FV1 153 aa10.6□□□□□ -0.71
RXRB-203ENST00000481441 PSORS1C2Q9UIG4 136 aa10.6□□□□□ -0.71
RXRB-203ENST00000481441 ESDP10768 282 aa10.59□□□□□ -0.71
RXRB-203ENST00000481441 SNRPEP62304 92 aaKnown RBP10.59□□□□□ -0.71
RXRB-203ENST00000481441 FAM19A2Q8N3H0 131 aa10.59□□□□□ -0.71
RXRB-203ENST00000481441 LINC00526Q96FQ7 95 aa10.59□□□□□ -0.71
RXRB-203ENST00000481441 CARD19Q96LW7 228 aa10.59□□□□□ -0.71
RXRB-203ENST00000481441 A0A096LNJ9 63 aa10.58□□□□□ -0.71
RXRB-203ENST00000481441 KRTAP9-6A0A140TA67 174 aa10.58□□□□□ -0.71
RXRB-203ENST00000481441 PDZD11Q5EBL8 140 aa10.58□□□□□ -0.71
RXRB-203ENST00000481441 C5orf52A6NGY3 159 aa10.58□□□□□ -0.72
RXRB-203ENST00000481441 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.57□□□□□ -0.72
RXRB-203ENST00000481441 A0A0U1RQV1 116 aa10.57□□□□□ -0.72
RXRB-203ENST00000481441 IGKV2-29A2NJV5 120 aaPredicted RBP10.57□□□□□ -0.72
RXRB-203ENST00000481441 PTTG1IPP53801 180 aa10.57□□□□□ -0.72
RXRB-203ENST00000481441 HIST3H2BBQ8N257 126 aa10.57□□□□□ -0.72
RXRB-203ENST00000481441 PRR26Q8N8Z3 221 aa10.57□□□□□ -0.72
RXRB-203ENST00000481441 FAT4Q6V0I7 4981 aa10.56□□□□□ -0.72
RXRB-203ENST00000481441 IGHV1-58A0A0C4DH39 117 aa10.56□□□□□ -0.72
RXRB-203ENST00000481441 A0A1W2PNN7 141 aa10.56□□□□□ -0.72
RXRB-203ENST00000481441 HBDP02042 147 aa10.56□□□□□ -0.72
RXRB-203ENST00000481441 RPL39P62891 51 aaKnown RBP10.56□□□□□ -0.72
RXRB-203ENST00000481441 AMMECR1LQ6DCA0 310 aa10.56□□□□□ -0.72
RXRB-203ENST00000481441 C2orf66Q6UXQ4 117 aa10.56□□□□□ -0.72
RXRB-203ENST00000481441 SYCNQ0VAF6 134 aa10.55□□□□□ -0.72
RXRB-203ENST00000481441 CYSLTR1Q9Y271 337 aa10.55□□□□□ -0.72
RXRB-203ENST00000481441 XCL1P47992 114 aa10.54□□□□□ -0.72
RXRB-203ENST00000481441 LCE2AQ5TA79 106 aaPredicted RBP10.54□□□□□ -0.72
RXRB-203ENST00000481441 TOMM6Q96B49 74 aa10.54□□□□□ -0.72
RXRB-203ENST00000481441 IFITM10A6NMD0 228 aa10.53□□□□□ -0.72
RXRB-203ENST00000481441 H7C423 109 aa10.53□□□□□ -0.72
RXRB-203ENST00000481441 FGF6P10767 208 aa10.53□□□□□ -0.72
RXRB-203ENST00000481441 G0S2P27469 103 aa10.53□□□□□ -0.72
RXRB-203ENST00000481441 GAGE2BQ13066 116 aa10.53□□□□□ -0.72
RXRB-203ENST00000481441 OR5A1Q8NGJ0 315 aa10.53□□□□□ -0.72
RXRB-203ENST00000481441 LOC107984640A0A0U1RRK4 108 aa10.52□□□□□ -0.73
RXRB-203ENST00000481441 CCL25O15444 150 aa10.52□□□□□ -0.73
RXRB-203ENST00000481441 FABP4P15090 132 aa10.52□□□□□ -0.73
RXRB-203ENST00000481441 S100A2P29034 98 aa10.52□□□□□ -0.73
RXRB-203ENST00000481441 TMEM18Q96B42 140 aa10.52□□□□□ -0.73
RXRB-203ENST00000481441 LINC00959A0A1B0GUT2 108 aa10.51□□□□□ -0.73
RXRB-203ENST00000481441 LEPROTL1O95214 131 aa10.51□□□□□ -0.73
RXRB-203ENST00000481441 C1orf137Q5JT78 98 aa10.51□□□□□ -0.73
RXRB-203ENST00000481441 LINC00173Q6ZV60 143 aa10.51□□□□□ -0.73
RXRB-203ENST00000481441 SCGB3A1Q96QR1 104 aa10.51□□□□□ -0.73
RXRB-203ENST00000481441 HIST1H2BLQ99880 126 aa10.51□□□□□ -0.73
RXRB-203ENST00000481441 UBE2D4Q9Y2X8 147 aa10.51□□□□□ -0.73
RXRB-203ENST00000481441 ZNF561-AS1K7EIQ3 104 aa10.5□□□□□ -0.73
RXRB-203ENST00000481441 PACRGQ96M98 296 aaPredicted RBP10.5□□□□□ -0.73
RXRB-203ENST00000481441 LINC01549A6NIU2 74 aa10.49□□□□□ -0.73
RXRB-203ENST00000481441 IGIPA6NJ69 53 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms