RNA–Protein interactions for RNA: ENST00000481300.1

CBX3-207, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-207ENST00000481300 RAB5BP61020 215 aa1.85□□□□□ -2.11
CBX3-207ENST00000481300 HBBP68871 147 aa1.85□□□□□ -2.11
CBX3-207ENST00000481300 TDRG1Q3Y452 100 aa1.85□□□□□ -2.11
CBX3-207ENST00000481300 SPANXN1Q5VSR9 72 aa1.85□□□□□ -2.11
CBX3-207ENST00000481300 RASL11AQ6T310 242 aa1.85□□□□□ -2.11
CBX3-207ENST00000481300 SMIM15Q7Z3B0 74 aa1.85□□□□□ -2.11
CBX3-207ENST00000481300 ZFP82Q8N141 532 aa1.85□□□□□ -2.11
CBX3-207ENST00000481300 C1orf158Q8N1D5 194 aa1.85□□□□□ -2.11
CBX3-207ENST00000481300 OR10AG1Q8NH19 301 aa1.85□□□□□ -2.11
CBX3-207ENST00000481300 LINC00467Q9BRT7 94 aa1.85□□□□□ -2.11
CBX3-207ENST00000481300 MAP1LC3CQ9BXW4 147 aa1.85□□□□□ -2.11
CBX3-207ENST00000481300 GNB1LQ9BYB4 327 aa1.85□□□□□ -2.11
CBX3-207ENST00000481300 PHLDA3Q9Y5J5 127 aa1.85□□□□□ -2.11
CBX3-207ENST00000481300 TRAPPC1Q9Y5R8 145 aa1.85□□□□□ -2.11
CBX3-207ENST00000481300 FBN1P35555 2871 aaKnown RBP1.85□□□□□ -2.11
CBX3-207ENST00000481300 DOCK11Q5JSL3 2073 aa1.84□□□□□ -2.11
CBX3-207ENST00000481300 STAB1Q9NY15 2570 aa1.84□□□□□ -2.11
CBX3-207ENST00000481300 IGLL5B9A064 214 aa1.84□□□□□ -2.11
CBX3-207ENST00000481300 M0R2P5 195 aa1.84□□□□□ -2.11
CBX3-207ENST00000481300 PRM2P04554 102 aa1.84□□□□□ -2.11
CBX3-207ENST00000481300 TRGC1P0CF51 173 aa1.84□□□□□ -2.11
CBX3-207ENST00000481300 SMIM17P0DL12 118 aa1.84□□□□□ -2.11
CBX3-207ENST00000481300 RNASE3P12724 160 aaKnown RBP1.84□□□□□ -2.11
CBX3-207ENST00000481300 HRES1P13985 223 aa1.84□□□□□ -2.11
CBX3-207ENST00000481300 EMP1P54849 157 aa1.84□□□□□ -2.11
CBX3-207ENST00000481300 RRN3P1Q2M238 152 aa1.84□□□□□ -2.11
CBX3-207ENST00000481300 DEFB121Q5J5C9 76 aa1.84□□□□□ -2.11
CBX3-207ENST00000481300 PTH2Q96A98 100 aa1.84□□□□□ -2.11
CBX3-207ENST00000481300 CNFNQ9BYD5 112 aa1.84□□□□□ -2.11
CBX3-207ENST00000481300 TMEM191AQ9H0A3 160 aa1.84□□□□□ -2.11
CBX3-207ENST00000481300 R4GN34 69 aa1.84□□□□□ -2.11
CBX3-207ENST00000481300 ZFHX3Q15911 3703 aa1.84□□□□□ -2.12
CBX3-207ENST00000481300 COL6A5A8TX70 2615 aa1.84□□□□□ -2.12
CBX3-207ENST00000481300 TRGV1A0A0A0MS02 117 aa1.83□□□□□ -2.12
CBX3-207ENST00000481300 LOC389332A0A1B0GUA5 103 aa1.83□□□□□ -2.12
CBX3-207ENST00000481300 SMIM9A6NGZ8 99 aa1.83□□□□□ -2.12
CBX3-207ENST00000481300 HIST1H2BKO60814 126 aa1.83□□□□□ -2.12
CBX3-207ENST00000481300 PPBPP02775 128 aa1.83□□□□□ -2.12
CBX3-207ENST00000481300 S100A6P06703 90 aa1.83□□□□□ -2.12
CBX3-207ENST00000481300 HIST1H2BJP06899 126 aa1.83□□□□□ -2.12
CBX3-207ENST00000481300 MGPP08493 103 aa1.83□□□□□ -2.12
CBX3-207ENST00000481300 EVI2AP22794 236 aa1.83□□□□□ -2.12
CBX3-207ENST00000481300 HIST1H2BOP23527 126 aa1.83□□□□□ -2.12
CBX3-207ENST00000481300 SRIP30626 198 aa1.83□□□□□ -2.12
CBX3-207ENST00000481300 CKS2P33552 79 aa1.83□□□□□ -2.12
CBX3-207ENST00000481300 HIST1H2BBP33778 126 aa1.83□□□□□ -2.12
CBX3-207ENST00000481300 NDUFA6P56556 154 aa1.83□□□□□ -2.12
CBX3-207ENST00000481300 HIST1H2BDP58876 126 aa1.83□□□□□ -2.12
CBX3-207ENST00000481300 HIST1H2BCP62807 126 aa1.83□□□□□ -2.12
CBX3-207ENST00000481300 HIST2H2BEQ16778 126 aa1.83□□□□□ -2.12
CBX3-207ENST00000481300 DEFB135Q30KP9 77 aa1.83□□□□□ -2.12
CBX3-207ENST00000481300 KRTAP21-3Q3LHN1 58 aa1.83□□□□□ -2.12
CBX3-207ENST00000481300 MRPL51Q4U2R6 128 aaKnown RBP1.83□□□□□ -2.12
CBX3-207ENST00000481300 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.83□□□□□ -2.12
CBX3-207ENST00000481300 AMMECR1LQ6DCA0 310 aa1.83□□□□□ -2.12
CBX3-207ENST00000481300 ZNF705AQ6ZN79 300 aaPredicted RBP1.83□□□□□ -2.12
CBX3-207ENST00000481300 BAGE3Q86Y29 109 aa1.83□□□□□ -2.12
CBX3-207ENST00000481300 AMN1Q8IY45 258 aa1.83□□□□□ -2.12
CBX3-207ENST00000481300 LINC00337Q8N6G1 96 aa1.83□□□□□ -2.12
CBX3-207ENST00000481300 GATD1Q8NB37 220 aa1.83□□□□□ -2.12
CBX3-207ENST00000481300 OR11H2Q8NH07 326 aa1.83□□□□□ -2.12
CBX3-207ENST00000481300 TMEM263Q8WUH6 116 aaKnown RBP1.83□□□□□ -2.12
CBX3-207ENST00000481300 HIST1H2BHQ93079 126 aa1.83□□□□□ -2.12
CBX3-207ENST00000481300 PRELID3AQ96N28 172 aa1.83□□□□□ -2.12
CBX3-207ENST00000481300 AP1S3Q96PC3 154 aa1.83□□□□□ -2.12
CBX3-207ENST00000481300 HIST1H2BNQ99877 126 aa1.83□□□□□ -2.12
CBX3-207ENST00000481300 HIST1H2BMQ99879 126 aa1.83□□□□□ -2.12
CBX3-207ENST00000481300 NOP10Q9NPE3 64 aaKnown RBP1.83□□□□□ -2.12
CBX3-207ENST00000481300 MRPL16Q9NX20 251 aaKnown RBP1.83□□□□□ -2.12
CBX3-207ENST00000481300 U3KQK5 164 aa1.83□□□□□ -2.12
CBX3-207ENST00000481300 CUBNO60494 3623 aa1.83□□□□□ -2.12
CBX3-207ENST00000481300 TRGV2A0A075B6R0 118 aa1.82□□□□□ -2.12
CBX3-207ENST00000481300 IGHV3-73A0A0B4J1V6 119 aa1.82□□□□□ -2.12
CBX3-207ENST00000481300 TRAV26-2A0A0B4J265 109 aa1.82□□□□□ -2.12
CBX3-207ENST00000481300 A8MWV9 139 aa1.82□□□□□ -2.12
CBX3-207ENST00000481300 D6R8Y8 96 aa1.82□□□□□ -2.12
CBX3-207ENST00000481300 K7EIL1 84 aa1.82□□□□□ -2.12
CBX3-207ENST00000481300 K7ERS5 55 aa1.82□□□□□ -2.12
CBX3-207ENST00000481300 DEFB4AO15263 64 aa1.82□□□□□ -2.12
CBX3-207ENST00000481300 NCR2O95944 276 aa1.82□□□□□ -2.12
CBX3-207ENST00000481300 IGHV3-53P01767 116 aa1.82□□□□□ -2.12
CBX3-207ENST00000481300 CRYGDP07320 174 aa1.82□□□□□ -2.12
CBX3-207ENST00000481300 DEFB130BP0DP73 79 aa1.82□□□□□ -2.12
CBX3-207ENST00000481300 DEFB130AP0DP74 79 aa1.82□□□□□ -2.12
CBX3-207ENST00000481300 MIFP14174 115 aa1.82□□□□□ -2.12
CBX3-207ENST00000481300 Q0VG73 95 aa1.82□□□□□ -2.12
CBX3-207ENST00000481300 IQCJQ1A5X6 159 aa1.82□□□□□ -2.12
CBX3-207ENST00000481300 LGALS9BQ3B8N2 356 aa1.82□□□□□ -2.12
CBX3-207ENST00000481300 PDZD11Q5EBL8 140 aa1.82□□□□□ -2.12
CBX3-207ENST00000481300 OR10J3Q5JRS4 329 aa1.82□□□□□ -2.12
CBX3-207ENST00000481300 FAM74A4Q5TZK3 123 aa1.82□□□□□ -2.12
CBX3-207ENST00000481300 CFAP126Q5VTH2 177 aa1.82□□□□□ -2.12
CBX3-207ENST00000481300 Q6ZTI0 123 aa1.82□□□□□ -2.12
CBX3-207ENST00000481300 NIT1Q86X76 327 aa1.82□□□□□ -2.12
CBX3-207ENST00000481300 MRAP2Q96G30 205 aa1.82□□□□□ -2.12
CBX3-207ENST00000481300 DPH3P1Q9H4G8 78 aa1.82□□□□□ -2.12
CBX3-207ENST00000481300 TP53TG1Q9Y2A0 90 aa1.82□□□□□ -2.12
CBX3-207ENST00000481300 LAMTOR2Q9Y2Q5 125 aa1.82□□□□□ -2.12
CBX3-207ENST00000481300 DNHD1Q96M86 4753 aa1.82□□□□□ -2.12
CBX3-207ENST00000481300 ANK2Q01484 3957 aa1.81□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 252.2 ms