RNA–Protein interactions for RNA: ENST00000481004.1

LINC02040-201, Transcript of long intergenic non-protein coding RNA 2040, humanhuman

TSL 5 BASIC

Gene LINC02040, Length 556 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02040-201ENST00000481004 SMIM27A0A1W2PRY6 76 aa3.47□□□□□ -1.85
LINC02040-201ENST00000481004 I3L3M4 83 aa3.47□□□□□ -1.85
LINC02040-201ENST00000481004 VCYO14598 125 aa3.47□□□□□ -1.85
LINC02040-201ENST00000481004 UBE2L6O14933 153 aa3.47□□□□□ -1.85
LINC02040-201ENST00000481004 CCL25O15444 150 aa3.47□□□□□ -1.85
LINC02040-201ENST00000481004 APCSP02743 223 aa3.47□□□□□ -1.85
LINC02040-201ENST00000481004 XCL1P47992 114 aa3.47□□□□□ -1.85
LINC02040-201ENST00000481004 COX6A2Q02221 97 aa3.47□□□□□ -1.85
LINC02040-201ENST00000481004 MRPL51Q4U2R6 128 aaKnown RBP3.47□□□□□ -1.85
LINC02040-201ENST00000481004 RNASE13Q5GAN3 156 aaKnown RBP3.47□□□□□ -1.85
LINC02040-201ENST00000481004 RNASEKQ6P5S7 137 aaKnown RBP3.47□□□□□ -1.85
LINC02040-201ENST00000481004 PLAC8Q9NZF1 115 aa3.47□□□□□ -1.85
LINC02040-201ENST00000481004 A0A1B0GXF2 115 aa3.46□□□□□ -1.86
LINC02040-201ENST00000481004 TMEM218A2RU14 115 aa3.46□□□□□ -1.86
LINC02040-201ENST00000481004 H7C423 109 aa3.46□□□□□ -1.86
LINC02040-201ENST00000481004 PMCHP20382 165 aa3.46□□□□□ -1.86
LINC02040-201ENST00000481004 AMMECR1LQ6DCA0 310 aa3.46□□□□□ -1.86
LINC02040-201ENST00000481004 MRPL52Q86TS9 123 aaKnown RBP3.46□□□□□ -1.86
LINC02040-201ENST00000481004 OR5A1Q8NGJ0 315 aa3.46□□□□□ -1.86
LINC02040-201ENST00000481004 SEC11CQ9BY50 192 aa3.46□□□□□ -1.86
LINC02040-201ENST00000481004 ST20Q9HBF5 79 aa3.46□□□□□ -1.86
LINC02040-201ENST00000481004 CDC42SE2Q9NRR3 84 aa3.46□□□□□ -1.86
LINC02040-201ENST00000481004 IGKV2-24A0A0C4DH68 120 aa3.45□□□□□ -1.86
LINC02040-201ENST00000481004 PHOX2AO14813 284 aa3.45□□□□□ -1.86
LINC02040-201ENST00000481004 OXTP01178 125 aa3.45□□□□□ -1.86
LINC02040-201ENST00000481004 ZNF25P17030 456 aaPredicted RBP3.45□□□□□ -1.86
LINC02040-201ENST00000481004 ADCYAP1P18509 176 aa3.45□□□□□ -1.86
LINC02040-201ENST00000481004 ADIRFQ15847 76 aa3.45□□□□□ -1.86
LINC02040-201ENST00000481004 TMEM241Q24JQ0 296 aa3.45□□□□□ -1.86
LINC02040-201ENST00000481004 FAM74A3Q4VXF1 159 aa3.45□□□□□ -1.86
LINC02040-201ENST00000481004 FAM104BQ5XKR9 115 aa3.45□□□□□ -1.86
LINC02040-201ENST00000481004 Q6ZUT4 128 aa3.45□□□□□ -1.86
LINC02040-201ENST00000481004 SMIM15Q7Z3B0 74 aa3.45□□□□□ -1.86
LINC02040-201ENST00000481004 ZNF664Q8N3J9 261 aa3.45□□□□□ -1.86
LINC02040-201ENST00000481004 MRAP2Q96G30 205 aa3.45□□□□□ -1.86
LINC02040-201ENST00000481004 OPRPNQ99935 248 aaPredicted RBP3.45□□□□□ -1.86
LINC02040-201ENST00000481004 UBE2D4Q9Y2X8 147 aa3.45□□□□□ -1.86
LINC02040-201ENST00000481004 C7orf77A4D0Y5 90 aa3.44□□□□□ -1.86
LINC02040-201ENST00000481004 NPYP01303 97 aa3.44□□□□□ -1.86
LINC02040-201ENST00000481004 CAMPP49913 170 aa3.44□□□□□ -1.86
LINC02040-201ENST00000481004 RPL39P62891 51 aaKnown RBP3.44□□□□□ -1.86
LINC02040-201ENST00000481004 PRR3P79522 188 aaKnown RBP3.44□□□□□ -1.86
LINC02040-201ENST00000481004 RIGQ13278 110 aa3.44□□□□□ -1.86
LINC02040-201ENST00000481004 PEA15Q15121 130 aa3.44□□□□□ -1.86
LINC02040-201ENST00000481004 NAT8Q9UHE5 227 aa3.44□□□□□ -1.86
LINC02040-201ENST00000481004 NAT8BQ9UHF3 227 aa3.44□□□□□ -1.86
LINC02040-201ENST00000481004 IGLV4-69A0A075B6H9 119 aa3.43□□□□□ -1.86
LINC02040-201ENST00000481004 TRBV24-1A0A075B6N3 115 aa3.43□□□□□ -1.86
LINC02040-201ENST00000481004 D6R8Y8 96 aa3.43□□□□□ -1.86
LINC02040-201ENST00000481004 MAJINQ3KP22 176 aa3.43□□□□□ -1.86
LINC02040-201ENST00000481004 MRPL54Q6P161 138 aaKnown RBP3.43□□□□□ -1.86
LINC02040-201ENST00000481004 CD164L2Q6UWJ8 174 aa3.43□□□□□ -1.86
LINC02040-201ENST00000481004 Q6ZRU5 148 aa3.43□□□□□ -1.86
LINC02040-201ENST00000481004 KRTAP11-1Q8IUC1 163 aa3.43□□□□□ -1.86
LINC02040-201ENST00000481004 SVBPQ8N300 66 aa3.43□□□□□ -1.86
LINC02040-201ENST00000481004 STPG4Q8N801 248 aa3.43□□□□□ -1.86
LINC02040-201ENST00000481004 BORCS7Q96B45 105 aa3.43□□□□□ -1.86
LINC02040-201ENST00000481004 CSDC2Q9Y534 153 aaKnown RBP3.43□□□□□ -1.86
LINC02040-201ENST00000481004 LRP2P98164 4655 aa3.43□□□□□ -1.86
LINC02040-201ENST00000481004 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.42□□□□□ -1.86
LINC02040-201ENST00000481004 TRAV13-1A0A0B4J241 112 aa3.42□□□□□ -1.86
LINC02040-201ENST00000481004 IGHV1-58A0A0C4DH39 117 aa3.42□□□□□ -1.86
LINC02040-201ENST00000481004 A0A0J9YXV3 536 aa3.42□□□□□ -1.86
LINC02040-201ENST00000481004 A0A1W2PNN7 141 aa3.42□□□□□ -1.86
LINC02040-201ENST00000481004 TCAPO15273 167 aa3.42□□□□□ -1.86
LINC02040-201ENST00000481004 SNAPINO95295 136 aa3.42□□□□□ -1.86
LINC02040-201ENST00000481004 RPL32P62910 135 aaKnown RBP3.42□□□□□ -1.86
LINC02040-201ENST00000481004 CFAP161Q6P656 301 aa3.42□□□□□ -1.86
LINC02040-201ENST00000481004 C5orf38Q86SI9 138 aa3.42□□□□□ -1.86
LINC02040-201ENST00000481004 KRTAP7-1Q8IUC3 87 aa3.42□□□□□ -1.86
LINC02040-201ENST00000481004 TMEM101Q96IK0 257 aa3.42□□□□□ -1.86
LINC02040-201ENST00000481004 CARD19Q96LW7 228 aa3.42□□□□□ -1.86
LINC02040-201ENST00000481004 SMIM2Q9BVW6 85 aa3.42□□□□□ -1.86
LINC02040-201ENST00000481004 F8W036 122 aa3.41□□□□□ -1.86
LINC02040-201ENST00000481004 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.41□□□□□ -1.86
LINC02040-201ENST00000481004 FCER1GP30273 86 aa3.41□□□□□ -1.86
LINC02040-201ENST00000481004 CKS2P33552 79 aa3.41□□□□□ -1.86
LINC02040-201ENST00000481004 HBBP68871 147 aa3.41□□□□□ -1.86
LINC02040-201ENST00000481004 SYCNQ0VAF6 134 aa3.41□□□□□ -1.86
LINC02040-201ENST00000481004 SRSF9Q13242 221 aaKnown RBP eCLIP3.41□□□□□ -1.86
LINC02040-201ENST00000481004 RHEBQ15382 184 aa3.41□□□□□ -1.86
LINC02040-201ENST00000481004 SS18Q15532 418 aa3.41□□□□□ -1.86
LINC02040-201ENST00000481004 ZC2HC1BQ5TFG8 222 aa3.41□□□□□ -1.86
LINC02040-201ENST00000481004 DPH3Q96FX2 82 aa3.41□□□□□ -1.86
LINC02040-201ENST00000481004 BTF3L4Q96K17 158 aa3.41□□□□□ -1.86
LINC02040-201ENST00000481004 C20orf78Q9BR46 151 aa3.41□□□□□ -1.86
LINC02040-201ENST00000481004 TIMM21Q9BVV7 248 aa3.41□□□□□ -1.86
LINC02040-201ENST00000481004 IGLV5-45A0A087WSX0 123 aa3.4□□□□□ -1.87
LINC02040-201ENST00000481004 IGHV3OR16-9A0A0B4J2B5 98 aa3.4□□□□□ -1.87
LINC02040-201ENST00000481004 FAM168BA1KXE4 195 aa3.4□□□□□ -1.87
LINC02040-201ENST00000481004 C1orf196B1AJZ1 125 aa3.4□□□□□ -1.87
LINC02040-201ENST00000481004 COX7A2LO14548 114 aa3.4□□□□□ -1.87
LINC02040-201ENST00000481004 APOC3P02656 99 aa3.4□□□□□ -1.87
LINC02040-201ENST00000481004 PNRC1Q12796 327 aaPredicted RBP3.4□□□□□ -1.87
LINC02040-201ENST00000481004 LINC00173Q6ZV60 143 aa3.4□□□□□ -1.87
LINC02040-201ENST00000481004 YPEL4Q96NS1 127 aa3.4□□□□□ -1.87
LINC02040-201ENST00000481004 KIR2DL4Q99706 377 aa3.4□□□□□ -1.87
LINC02040-201ENST00000481004 RNF213Q63HN8 5207 aa3.4□□□□□ -1.87
LINC02040-201ENST00000481004 IGLV4-3A0A075B6K6 122 aa3.39□□□□□ -1.87
LINC02040-201ENST00000481004 A0A1B0GW15 77 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms