RNA–Protein interactions for RNA: ENST00000480900.1

HSPG2-209, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 500 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-209ENST00000480900 J3QL48 77 aa10.76□□□□□ -0.69
HSPG2-209ENST00000480900 C5orf38Q86SI9 138 aa10.76□□□□□ -0.69
HSPG2-209ENST00000480900 Q8N8P6 123 aa10.76□□□□□ -0.69
HSPG2-209ENST00000480900 SEC11CQ9BY50 192 aa10.76□□□□□ -0.69
HSPG2-209ENST00000480900 IGHV3OR16-9A0A0B4J2B5 98 aa10.74□□□□□ -0.69
HSPG2-209ENST00000480900 K7EMI3 77 aa10.74□□□□□ -0.69
HSPG2-209ENST00000480900 COMMD7Q86VX2 200 aa10.74□□□□□ -0.69
HSPG2-209ENST00000480900 C2orf48Q96LS8 159 aa10.74□□□□□ -0.69
HSPG2-209ENST00000480900 ORMDL2Q53FV1 153 aa10.73□□□□□ -0.69
HSPG2-209ENST00000480900 Q6ZRU5 148 aa10.73□□□□□ -0.69
HSPG2-209ENST00000480900 STPG4Q8N801 248 aa10.73□□□□□ -0.69
HSPG2-209ENST00000480900 OR10D4PQ8NGN7 298 aa10.73□□□□□ -0.69
HSPG2-209ENST00000480900 C7orf33Q8WU49 177 aa10.73□□□□□ -0.69
HSPG2-209ENST00000480900 CAMK2N2Q96S95 79 aa10.73□□□□□ -0.69
HSPG2-209ENST00000480900 CYSLTR1Q9Y271 337 aa10.73□□□□□ -0.69
HSPG2-209ENST00000480900 IGLV4-3A0A075B6K6 122 aa10.72□□□□□ -0.69
HSPG2-209ENST00000480900 HNRNPA3P51991 378 aaKnown RBP10.72□□□□□ -0.69
HSPG2-209ENST00000480900 SPAG11BQ08648 103 aa10.72□□□□□ -0.69
HSPG2-209ENST00000480900 TMEM141Q96I45 108 aa10.72□□□□□ -0.69
HSPG2-209ENST00000480900 NXT2Q9NPJ8 142 aaKnown RBP10.72□□□□□ -0.69
HSPG2-209ENST00000480900 PKHD1L1Q86WI1 4243 aa10.72□□□□□ -0.69
HSPG2-209ENST00000480900 LOC107984640A0A0U1RRK4 108 aa10.71□□□□□ -0.69
HSPG2-209ENST00000480900 OXTP01178 125 aa10.71□□□□□ -0.69
HSPG2-209ENST00000480900 C2orf66Q6UXQ4 117 aa10.71□□□□□ -0.69
HSPG2-209ENST00000480900 TGIF2-C20orf24A0A0A6YYL0 155 aa10.7□□□□□ -0.7
HSPG2-209ENST00000480900 S100PP25815 95 aa10.7□□□□□ -0.7
HSPG2-209ENST00000480900 PTTG1IPP53801 180 aa10.7□□□□□ -0.7
HSPG2-209ENST00000480900 ORAOV1Q8WV07 137 aa10.7□□□□□ -0.7
HSPG2-209ENST00000480900 F8WDY8 70 aa10.69□□□□□ -0.7
HSPG2-209ENST00000480900 NPSP0C0P6 89 aa10.69□□□□□ -0.7
HSPG2-209ENST00000480900 RNF151Q2KHN1 245 aa10.69□□□□□ -0.7
HSPG2-209ENST00000480900 C10orf91Q5T1B1 145 aa10.69□□□□□ -0.7
HSPG2-209ENST00000480900 LINC00242Q5T6M2 205 aa10.69□□□□□ -0.7
HSPG2-209ENST00000480900 TEX43Q6ZNM6 134 aa10.69□□□□□ -0.7
HSPG2-209ENST00000480900 LRP1Q07954 4544 aaKnown RBP10.68□□□□□ -0.7
HSPG2-209ENST00000480900 A0A087WZ39 114 aa10.68□□□□□ -0.7
HSPG2-209ENST00000480900 KIAA1644Q3SXP7 199 aa10.68□□□□□ -0.7
HSPG2-209ENST00000480900 Q6ZN92 141 aa10.68□□□□□ -0.7
HSPG2-209ENST00000480900 C2orf88Q9BSF0 95 aa10.68□□□□□ -0.7
HSPG2-209ENST00000480900 CARHSP1Q9Y2V2 147 aaKnown RBP10.68□□□□□ -0.7
HSPG2-209ENST00000480900 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.67□□□□□ -0.7
HSPG2-209ENST00000480900 G0S2P27469 103 aa10.67□□□□□ -0.7
HSPG2-209ENST00000480900 COX19Q49B96 90 aa10.67□□□□□ -0.7
HSPG2-209ENST00000480900 LINC00173Q6ZV60 143 aa10.67□□□□□ -0.7
HSPG2-209ENST00000480900 AMELXQ99217 191 aa10.67□□□□□ -0.7
HSPG2-209ENST00000480900 GNB1LQ9BYB4 327 aa10.67□□□□□ -0.7
HSPG2-209ENST00000480900 IGIPA6NJ69 53 aa10.66□□□□□ -0.7
HSPG2-209ENST00000480900 NDUFA1O15239 70 aa10.66□□□□□ -0.7
HSPG2-209ENST00000480900 UBE2D1P51668 147 aa10.66□□□□□ -0.7
HSPG2-209ENST00000480900 GAGE2BQ13066 116 aa10.66□□□□□ -0.7
HSPG2-209ENST00000480900 RHEBQ15382 184 aa10.66□□□□□ -0.7
HSPG2-209ENST00000480900 VCX2Q9H322 139 aa10.66□□□□□ -0.7
HSPG2-209ENST00000480900 MRPL35Q9NZE8 188 aaKnown RBP10.66□□□□□ -0.7
HSPG2-209ENST00000480900 PRR3P79522 188 aaKnown RBP10.64□□□□□ -0.71
HSPG2-209ENST00000480900 PAPPA-AS1Q5QFB9 102 aa10.64□□□□□ -0.71
HSPG2-209ENST00000480900 LINC01561Q8N1V8 128 aa10.64□□□□□ -0.71
HSPG2-209ENST00000480900 MT-ND6P03923 174 aa10.63□□□□□ -0.71
HSPG2-209ENST00000480900 RPL18AQ02543 176 aaKnown RBP10.63□□□□□ -0.71
HSPG2-209ENST00000480900 ZC2HC1BQ5TFG8 222 aa10.63□□□□□ -0.71
HSPG2-209ENST00000480900 TOMM6Q96B49 74 aa10.63□□□□□ -0.71
HSPG2-209ENST00000480900 TIMM17AQ99595 171 aa10.63□□□□□ -0.71
HSPG2-209ENST00000480900 RPS10P5Q9NQ39 176 aa10.63□□□□□ -0.71
HSPG2-209ENST00000480900 FAT3Q8TDW7 4589 aa10.63□□□□□ -0.71
HSPG2-209ENST00000480900 A0A0J9YXV3 536 aa10.62□□□□□ -0.71
HSPG2-209ENST00000480900 KIAA0087Q14695 138 aa10.62□□□□□ -0.71
HSPG2-209ENST00000480900 FAM19A3Q7Z5A8 133 aa10.62□□□□□ -0.71
HSPG2-209ENST00000480900 ALKBH7Q9BT30 221 aaPredicted RBP10.62□□□□□ -0.71
HSPG2-209ENST00000480900 LINC01546A6NGU7 62 aa10.61□□□□□ -0.71
HSPG2-209ENST00000480900 C10orf25Q5T742 122 aa10.61□□□□□ -0.71
HSPG2-209ENST00000480900 UNQ6190/PRO20217Q6UXQ8 127 aa10.61□□□□□ -0.71
HSPG2-209ENST00000480900 LINC01549A6NIU2 74 aa10.6□□□□□ -0.71
HSPG2-209ENST00000480900 TLX1NBP0CAT3 122 aa10.6□□□□□ -0.71
HSPG2-209ENST00000480900 SEC11AP67812 179 aa10.6□□□□□ -0.71
HSPG2-209ENST00000480900 MRPL18Q9H0U6 180 aaKnown RBP10.6□□□□□ -0.71
HSPG2-209ENST00000480900 C6orf48Q9UBA6 75 aa10.6□□□□□ -0.71
HSPG2-209ENST00000480900 A0A1W2PNN7 141 aa10.59□□□□□ -0.71
HSPG2-209ENST00000480900 C9orf116Q5BN46 136 aaPredicted RBP10.59□□□□□ -0.71
HSPG2-209ENST00000480900 ERASQ7Z444 233 aa10.59□□□□□ -0.71
HSPG2-209ENST00000480900 TRBV30A0A0K0K1B3 111 aa10.58□□□□□ -0.72
HSPG2-209ENST00000480900 HERVK_113P63121 156 aa10.58□□□□□ -0.72
HSPG2-209ENST00000480900 FABP9Q0Z7S8 132 aa10.58□□□□□ -0.72
HSPG2-209ENST00000480900 Q6ZRP5 223 aa10.58□□□□□ -0.72
HSPG2-209ENST00000480900 SCGB3A1Q96QR1 104 aa10.58□□□□□ -0.72
HSPG2-209ENST00000480900 C2orf82Q6UX34 121 aa10.56□□□□□ -0.72
HSPG2-209ENST00000480900 FA2HQ7L5A8 372 aa10.56□□□□□ -0.72
HSPG2-209ENST00000480900 GEMIN7Q9H840 131 aaKnown RBP10.56□□□□□ -0.72
HSPG2-209ENST00000480900 APOC3P02656 99 aa10.55□□□□□ -0.72
HSPG2-209ENST00000480900 PRSS2P07478 247 aa10.55□□□□□ -0.72
HSPG2-209ENST00000480900 NDUFA5Q16718 116 aa10.55□□□□□ -0.72
HSPG2-209ENST00000480900 Q8IZM0 81 aa10.55□□□□□ -0.72
HSPG2-209ENST00000480900 SMCO4Q9NRQ5 59 aa10.55□□□□□ -0.72
HSPG2-209ENST00000480900 CDKN2A-AS1Q9UH64 79 aa10.55□□□□□ -0.72
HSPG2-209ENST00000480900 SNAPINO95295 136 aa10.54□□□□□ -0.72
HSPG2-209ENST00000480900 MT1HL1P0DM35 61 aa10.54□□□□□ -0.72
HSPG2-209ENST00000480900 SVBPQ8N300 66 aa10.54□□□□□ -0.72
HSPG2-209ENST00000480900 PACRGQ96M98 296 aaPredicted RBP10.54□□□□□ -0.72
HSPG2-209ENST00000480900 SERTAD4-AS1Q5TG53 156 aa10.53□□□□□ -0.72
HSPG2-209ENST00000480900 SPINK6Q6UWN8 80 aa10.53□□□□□ -0.72
HSPG2-209ENST00000480900 TOMM7Q9P0U1 55 aa10.53□□□□□ -0.72
HSPG2-209ENST00000480900 NDUFC2-KCTD14E9PQ53 114 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms