RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 CDKN2A-AS1Q9UH64 79 aa11.82□□□□□ -0.52
UPF3A-206ENST00000480362 IGLV5-45A0A087WSX0 123 aa11.81□□□□□ -0.52
UPF3A-206ENST00000480362 PLECQ15149 4684 aaKnown RBP11.81□□□□□ -0.52
UPF3A-206ENST00000480362 TRAV8-3A0A0A6YYJ7 113 aa11.8□□□□□ -0.52
UPF3A-206ENST00000480362 CD164L2Q6UWJ8 174 aa11.8□□□□□ -0.52
UPF3A-206ENST00000480362 Q9HAA7 133 aa11.8□□□□□ -0.52
UPF3A-206ENST00000480362 IGHV3OR16-9A0A0B4J2B5 98 aa11.79□□□□□ -0.52
UPF3A-206ENST00000480362 GAGE12HA6NDE8 117 aa11.79□□□□□ -0.52
UPF3A-206ENST00000480362 HSBP1L1C9JCN9 74 aa11.79□□□□□ -0.52
UPF3A-206ENST00000480362 LY6G6CO95867 125 aa11.79□□□□□ -0.52
UPF3A-206ENST00000480362 LINC00518Q8N0U6 118 aa11.79□□□□□ -0.52
UPF3A-206ENST00000480362 C12orf57Q99622 126 aa11.79□□□□□ -0.52
UPF3A-206ENST00000480362 VAMP8Q9BV40 100 aa11.79□□□□□ -0.52
UPF3A-206ENST00000480362 KRTAP1-5Q9BYS1 174 aa11.79□□□□□ -0.52
UPF3A-206ENST00000480362 NBDYA0A0U1RRE5 68 aa11.78□□□□□ -0.52
UPF3A-206ENST00000480362 TMEM223A0PJW6 202 aa11.78□□□□□ -0.52
UPF3A-206ENST00000480362 H3BRM9 83 aa11.78□□□□□ -0.52
UPF3A-206ENST00000480362 S100A12P80511 92 aa11.78□□□□□ -0.52
UPF3A-206ENST00000480362 C5orf38Q86SI9 138 aa11.78□□□□□ -0.52
UPF3A-206ENST00000480362 C1orf43Q9BWL3 253 aa11.78□□□□□ -0.52
UPF3A-206ENST00000480362 PAM16Q9Y3D7 125 aa11.78□□□□□ -0.52
UPF3A-206ENST00000480362 IGKV2D-24A0A075B6R9 120 aa11.77□□□□□ -0.53
UPF3A-206ENST00000480362 FOXI1Q12951 378 aa11.77□□□□□ -0.53
UPF3A-206ENST00000480362 ANKRD39Q53RE8 183 aa11.77□□□□□ -0.53
UPF3A-206ENST00000480362 TTC32Q5I0X7 151 aa11.77□□□□□ -0.53
UPF3A-206ENST00000480362 LINC00476Q8WZB0 136 aa11.77□□□□□ -0.53
UPF3A-206ENST00000480362 A0A087WZ39 114 aa11.76□□□□□ -0.53
UPF3A-206ENST00000480362 SPINK8P0C7L1 97 aa11.76□□□□□ -0.53
UPF3A-206ENST00000480362 HERVK_113P61574 105 aa11.76□□□□□ -0.53
UPF3A-206ENST00000480362 KRTAP26-1Q6PEX3 210 aa11.76□□□□□ -0.53
UPF3A-206ENST00000480362 IGHV3-64A0A075B6Q5 118 aa11.75□□□□□ -0.53
UPF3A-206ENST00000480362 SPATA45Q537H7 98 aa11.75□□□□□ -0.53
UPF3A-206ENST00000480362 COX7A2LO14548 114 aa11.74□□□□□ -0.53
UPF3A-206ENST00000480362 RMI2Q96E14 147 aa11.74□□□□□ -0.53
UPF3A-206ENST00000480362 SMIM1B2RUZ4 78 aa11.73□□□□□ -0.53
UPF3A-206ENST00000480362 E9PLD3 99 aa11.73□□□□□ -0.53
UPF3A-206ENST00000480362 M0R2N4 97 aa11.73□□□□□ -0.53
UPF3A-206ENST00000480362 TENM2Q9NT68 2774 aa11.72□□□□□ -0.53
UPF3A-206ENST00000480362 IGKV2D-26A0A0A0MRZ7 120 aa11.72□□□□□ -0.53
UPF3A-206ENST00000480362 IGHV1-58A0A0C4DH39 117 aa11.72□□□□□ -0.53
UPF3A-206ENST00000480362 MALP21145 153 aa11.72□□□□□ -0.53
UPF3A-206ENST00000480362 LINC01561Q8N1V8 128 aa11.72□□□□□ -0.53
UPF3A-206ENST00000480362 IGLV5-39A0A0G2JS06 123 aa11.7□□□□□ -0.54
UPF3A-206ENST00000480362 LEPROTO15243 131 aa11.7□□□□□ -0.54
UPF3A-206ENST00000480362 NMUP48645 174 aa11.7□□□□□ -0.54
UPF3A-206ENST00000480362 Q6ZR54 194 aa11.69□□□□□ -0.54
UPF3A-206ENST00000480362 PLEKHB2Q96CS7 222 aa11.69□□□□□ -0.54
UPF3A-206ENST00000480362 TM2D2Q9BX73 214 aa11.69□□□□□ -0.54
UPF3A-206ENST00000480362 COX11Q9Y6N1 276 aa11.69□□□□□ -0.54
UPF3A-206ENST00000480362 LYSTQ99698 3801 aa11.68□□□□□ -0.54
UPF3A-206ENST00000480362 VPS13DQ5THJ4 4388 aa11.68□□□□□ -0.54
UPF3A-206ENST00000480362 J3QQQ9 107 aa11.67□□□□□ -0.54
UPF3A-206ENST00000480362 APOMO95445 188 aa11.67□□□□□ -0.54
UPF3A-206ENST00000480362 TSPEAR-AS2P59090 65 aa11.67□□□□□ -0.54
UPF3A-206ENST00000480362 MAPKAPK5-AS1Q8N8E1 139 aa11.67□□□□□ -0.54
UPF3A-206ENST00000480362 C14orf144Q96I85 54 aa11.67□□□□□ -0.54
UPF3A-206ENST00000480362 TOMM7Q9P0U1 55 aa11.67□□□□□ -0.54
UPF3A-206ENST00000480362 LGALS3P17931 250 aaKnown RBP11.66□□□□□ -0.54
UPF3A-206ENST00000480362 PCP2Q8IVA1 136 aa11.66□□□□□ -0.54
UPF3A-206ENST00000480362 COX7B2Q8TF08 81 aa11.66□□□□□ -0.54
UPF3A-206ENST00000480362 ORAOV1Q8WV07 137 aa11.66□□□□□ -0.54
UPF3A-206ENST00000480362 TTTY13Q9BZ97 58 aa11.66□□□□□ -0.54
UPF3A-206ENST00000480362 PRO1933Q9H354 126 aa11.66□□□□□ -0.54
UPF3A-206ENST00000480362 DNAH1Q9P2D7 4330 aa11.64□□□□□ -0.55
UPF3A-206ENST00000480362 PSCAO43653 123 aa11.64□□□□□ -0.55
UPF3A-206ENST00000480362 COX8AP10176 69 aa11.64□□□□□ -0.55
UPF3A-206ENST00000480362 ALMS1Q8TCU4 4167 aa11.63□□□□□ -0.55
UPF3A-206ENST00000480362 PRSS2P07478 247 aa11.63□□□□□ -0.55
UPF3A-206ENST00000480362 C6orf226Q5I0X4 101 aa11.63□□□□□ -0.55
UPF3A-206ENST00000480362 CFAP161Q6P656 301 aa11.63□□□□□ -0.55
UPF3A-206ENST00000480362 Q8IZM0 81 aa11.63□□□□□ -0.55
UPF3A-206ENST00000480362 C6orf223Q8N319 242 aa11.63□□□□□ -0.55
UPF3A-206ENST00000480362 C15orf56Q8N910 161 aa11.63□□□□□ -0.55
UPF3A-206ENST00000480362 KIAA0087Q14695 138 aa11.62□□□□□ -0.55
UPF3A-206ENST00000480362 MYMXA0A1B0GTQ4 84 aa11.61□□□□□ -0.55
UPF3A-206ENST00000480362 ZNF815PA8K554 130 aa11.61□□□□□ -0.55
UPF3A-206ENST00000480362 USP17L23D6RBM5 183 aa11.61□□□□□ -0.55
UPF3A-206ENST00000480362 SPAG11BQ08648 103 aa11.61□□□□□ -0.55
UPF3A-206ENST00000480362 SLC25A34Q6PIV7 304 aa11.61□□□□□ -0.55
UPF3A-206ENST00000480362 Q6ZRN7 208 aaPredicted RBP11.61□□□□□ -0.55
UPF3A-206ENST00000480362 BOD1L2Q8IYS8 172 aa11.61□□□□□ -0.55
UPF3A-206ENST00000480362 TP73-AS1Q9UF72 201 aa11.61□□□□□ -0.55
UPF3A-206ENST00000480362 NDUFA12Q9UI09 145 aa11.61□□□□□ -0.55
UPF3A-206ENST00000480362 LCE6AA0A183 80 aa11.6□□□□□ -0.55
UPF3A-206ENST00000480362 HIGD2BQ4VC39 106 aa11.6□□□□□ -0.55
UPF3A-206ENST00000480362 LINC00526Q96FQ7 95 aa11.6□□□□□ -0.55
UPF3A-206ENST00000480362 TSTD3H0UI37 97 aa11.59□□□□□ -0.55
UPF3A-206ENST00000480362 ZNF561-AS1K7EIQ3 104 aa11.59□□□□□ -0.55
UPF3A-206ENST00000480362 LECT2O14960 151 aa11.59□□□□□ -0.55
UPF3A-206ENST00000480362 DLEU1O43261 78 aa11.59□□□□□ -0.55
UPF3A-206ENST00000480362 C1orf134Q5TEV5 83 aa11.59□□□□□ -0.55
UPF3A-206ENST00000480362 UQCR10Q9UDW1 63 aa11.59□□□□□ -0.55
UPF3A-206ENST00000480362 NDUFA1O15239 70 aa11.58□□□□□ -0.56
UPF3A-206ENST00000480362 GVQW2A0A096LPI5 108 aaPredicted RBP11.57□□□□□ -0.56
UPF3A-206ENST00000480362 CKS1BP61024 79 aa11.57□□□□□ -0.56
UPF3A-206ENST00000480362 C2orf82Q6UX34 121 aa11.57□□□□□ -0.56
UPF3A-206ENST00000480362 NTN5Q8WTR8 489 aaPredicted RBP11.57□□□□□ -0.56
UPF3A-206ENST00000480362 ZNF625Q96I27 306 aaPredicted RBP11.57□□□□□ -0.56
UPF3A-206ENST00000480362 MIEN1Q9BRT3 115 aa11.57□□□□□ -0.56
UPF3A-206ENST00000480362 CXCL5P42830 114 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 118.7 ms