RNA–Protein interactions for RNA: ENST00000479615.5

PRKN-207, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene PRKN, Length 904 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-207ENST00000479615 PTTG1IPP53801 180 aa9.46□□□□□ -0.9
PRKN-207ENST00000479615 RPL39P62891 51 aaKnown RBP9.46□□□□□ -0.9
PRKN-207ENST00000479615 C5orf38Q86SI9 138 aa9.46□□□□□ -0.9
PRKN-207ENST00000479615 IGHV3OR16-9A0A0B4J2B5 98 aa9.45□□□□□ -0.9
PRKN-207ENST00000479615 MAP1LC3AQ9H492 121 aa9.45□□□□□ -0.9
PRKN-207ENST00000479615 LRP1Q07954 4544 aaKnown RBP9.44□□□□□ -0.9
PRKN-207ENST00000479615 IFITM10A6NMD0 228 aa9.44□□□□□ -0.9
PRKN-207ENST00000479615 PRR3P79522 188 aaKnown RBP9.44□□□□□ -0.9
PRKN-207ENST00000479615 SPAG11BQ08648 103 aa9.44□□□□□ -0.9
PRKN-207ENST00000479615 CLLU1Q5K131 121 aa9.44□□□□□ -0.9
PRKN-207ENST00000479615 IMMP2LQ96T52 175 aa9.44□□□□□ -0.9
PRKN-207ENST00000479615 NPSP0C0P6 89 aa9.43□□□□□ -0.9
PRKN-207ENST00000479615 G0S2P27469 103 aa9.43□□□□□ -0.9
PRKN-207ENST00000479615 GAGE2BQ13066 116 aa9.43□□□□□ -0.9
PRKN-207ENST00000479615 Q6ZRP5 223 aa9.43□□□□□ -0.9
PRKN-207ENST00000479615 MRPL35Q9NZE8 188 aaKnown RBP9.43□□□□□ -0.9
PRKN-207ENST00000479615 TGIF2-C20orf24A0A0A6YYL0 155 aa9.42□□□□□ -0.9
PRKN-207ENST00000479615 ORMDL2Q53FV1 153 aa9.42□□□□□ -0.9
PRKN-207ENST00000479615 UQCC3Q6UW78 93 aa9.42□□□□□ -0.9
PRKN-207ENST00000479615 Q8N8P6 123 aa9.42□□□□□ -0.9
PRKN-207ENST00000479615 FAM104AQ969W3 186 aa9.42□□□□□ -0.9
PRKN-207ENST00000479615 NDUFA1O15239 70 aa9.41□□□□□ -0.9
PRKN-207ENST00000479615 SPINK6Q6UWN8 80 aa9.41□□□□□ -0.9
PRKN-207ENST00000479615 ORAOV1Q8WV07 137 aa9.41□□□□□ -0.9
PRKN-207ENST00000479615 TMEM141Q96I45 108 aa9.41□□□□□ -0.9
PRKN-207ENST00000479615 C2orf88Q9BSF0 95 aa9.41□□□□□ -0.9
PRKN-207ENST00000479615 CYSLTR1Q9Y271 337 aa9.41□□□□□ -0.9
PRKN-207ENST00000479615 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.4□□□□□ -0.9
PRKN-207ENST00000479615 Q6ZN92 141 aa9.4□□□□□ -0.9
PRKN-207ENST00000479615 TEX43Q6ZNM6 134 aa9.4□□□□□ -0.9
PRKN-207ENST00000479615 LINC01561Q8N1V8 128 aa9.4□□□□□ -0.9
PRKN-207ENST00000479615 OPRPNQ99935 248 aaPredicted RBP9.4□□□□□ -0.9
PRKN-207ENST00000479615 CTDSP1Q9GZU7 261 aa9.4□□□□□ -0.9
PRKN-207ENST00000479615 IGLV4-3A0A075B6K6 122 aa9.39□□□□□ -0.91
PRKN-207ENST00000479615 A0A087WZ39 114 aa9.39□□□□□ -0.91
PRKN-207ENST00000479615 LOC389332A0A1B0GUA5 103 aa9.39□□□□□ -0.91
PRKN-207ENST00000479615 PAPPA-AS1Q5QFB9 102 aa9.39□□□□□ -0.91
PRKN-207ENST00000479615 NXT2Q9NPJ8 142 aaKnown RBP9.39□□□□□ -0.91
PRKN-207ENST00000479615 FAT3Q8TDW7 4589 aa9.39□□□□□ -0.91
PRKN-207ENST00000479615 TRAV9-1A0A075B6T8 112 aa9.38□□□□□ -0.91
PRKN-207ENST00000479615 TLX1NBP0CAT3 122 aa9.38□□□□□ -0.91
PRKN-207ENST00000479615 MT1HL1P0DM35 61 aa9.38□□□□□ -0.91
PRKN-207ENST00000479615 RPL18AQ02543 176 aaKnown RBP9.38□□□□□ -0.91
PRKN-207ENST00000479615 LINC00242Q5T6M2 205 aa9.38□□□□□ -0.91
PRKN-207ENST00000479615 REG3GQ6UW15 175 aa9.38□□□□□ -0.91
PRKN-207ENST00000479615 C2orf66Q6UXQ4 117 aa9.38□□□□□ -0.91
PRKN-207ENST00000479615 VCX2Q9H322 139 aa9.38□□□□□ -0.91
PRKN-207ENST00000479615 PLA2G2DQ9UNK4 145 aa9.38□□□□□ -0.91
PRKN-207ENST00000479615 SEC11AP67812 179 aa9.37□□□□□ -0.91
PRKN-207ENST00000479615 C9orf116Q5BN46 136 aaPredicted RBP9.37□□□□□ -0.91
PRKN-207ENST00000479615 LINC01600Q96MT4 127 aa9.37□□□□□ -0.91
PRKN-207ENST00000479615 A0A1W2PNN7 141 aa9.36□□□□□ -0.91
PRKN-207ENST00000479615 TRBV30A0A0K0K1B3 111 aa9.35□□□□□ -0.91
PRKN-207ENST00000479615 TMEM218A2RU14 115 aa9.35□□□□□ -0.91
PRKN-207ENST00000479615 LINC01549A6NIU2 74 aa9.35□□□□□ -0.91
PRKN-207ENST00000479615 UBE2D1P51668 147 aa9.35□□□□□ -0.91
PRKN-207ENST00000479615 SRSF9Q13242 221 aaKnown RBP eCLIP9.35□□□□□ -0.91
PRKN-207ENST00000479615 AMELXQ99217 191 aa9.35□□□□□ -0.91
PRKN-207ENST00000479615 S100PP25815 95 aa9.34□□□□□ -0.91
PRKN-207ENST00000479615 IGIPA6NJ69 53 aa9.33□□□□□ -0.92
PRKN-207ENST00000479615 KIAA0087Q14695 138 aa9.33□□□□□ -0.92
PRKN-207ENST00000479615 COX19Q49B96 90 aa9.33□□□□□ -0.92
PRKN-207ENST00000479615 UNQ6190/PRO20217Q6UXQ8 127 aa9.33□□□□□ -0.92
PRKN-207ENST00000479615 FAM19A3Q7Z5A8 133 aa9.33□□□□□ -0.92
PRKN-207ENST00000479615 PACRGQ96M98 296 aaPredicted RBP9.33□□□□□ -0.92
PRKN-207ENST00000479615 SEC11CQ9BY50 192 aa9.33□□□□□ -0.92
PRKN-207ENST00000479615 PKHD1L1Q86WI1 4243 aa9.32□□□□□ -0.92
PRKN-207ENST00000479615 A0A0J9YXV3 536 aa9.32□□□□□ -0.92
PRKN-207ENST00000479615 MT-ND6P03923 174 aa9.32□□□□□ -0.92
PRKN-207ENST00000479615 HERVK_113P63121 156 aa9.32□□□□□ -0.92
PRKN-207ENST00000479615 TIMM17AQ99595 171 aa9.32□□□□□ -0.92
PRKN-207ENST00000479615 C6orf48Q9UBA6 75 aa9.32□□□□□ -0.92
PRKN-207ENST00000479615 PRSS2P07478 247 aa9.31□□□□□ -0.92
PRKN-207ENST00000479615 GNB1LQ9BYB4 327 aa9.31□□□□□ -0.92
PRKN-207ENST00000479615 NDUFC2-KCTD14E9PQ53 114 aa9.3□□□□□ -0.92
PRKN-207ENST00000479615 C10orf25Q5T742 122 aa9.3□□□□□ -0.92
PRKN-207ENST00000479615 TOMM6Q96B49 74 aa9.3□□□□□ -0.92
PRKN-207ENST00000479615 PSORS1C2Q9UIG4 136 aa9.3□□□□□ -0.92
PRKN-207ENST00000479615 HMCN2Q8NDA2 5059 aa9.29□□□□□ -0.92
PRKN-207ENST00000479615 ADCYAP1P18509 176 aa9.29□□□□□ -0.92
PRKN-207ENST00000479615 CKS1BP61024 79 aa9.29□□□□□ -0.92
PRKN-207ENST00000479615 LINC00173Q6ZV60 143 aa9.29□□□□□ -0.92
PRKN-207ENST00000479615 ERASQ7Z444 233 aa9.29□□□□□ -0.92
PRKN-207ENST00000479615 C6orf226Q5I0X4 101 aa9.28□□□□□ -0.92
PRKN-207ENST00000479615 Q8IZM0 81 aa9.28□□□□□ -0.92
PRKN-207ENST00000479615 GEMIN7Q9H840 131 aaKnown RBP9.28□□□□□ -0.92
PRKN-207ENST00000479615 IFITM2Q01629 132 aa9.27□□□□□ -0.93
PRKN-207ENST00000479615 GAGE2EQ4V326 116 aa9.27□□□□□ -0.93
PRKN-207ENST00000479615 C1orf137Q5JT78 98 aa9.27□□□□□ -0.93
PRKN-207ENST00000479615 PHF5AQ7RTV0 110 aaKnown RBP9.27□□□□□ -0.93
PRKN-207ENST00000479615 GAGE2DQ9UEU5 116 aa9.27□□□□□ -0.93
PRKN-207ENST00000479615 LINC01546A6NGU7 62 aa9.26□□□□□ -0.93
PRKN-207ENST00000479615 CXCL5P42830 114 aa9.26□□□□□ -0.93
PRKN-207ENST00000479615 KRTAP10-8P60410 259 aa9.26□□□□□ -0.93
PRKN-207ENST00000479615 ODF1Q14990 250 aa9.26□□□□□ -0.93
PRKN-207ENST00000479615 RHEBQ15382 184 aa9.26□□□□□ -0.93
PRKN-207ENST00000479615 KIAA1644Q3SXP7 199 aa9.26□□□□□ -0.93
PRKN-207ENST00000479615 SCGB3A1Q96QR1 104 aa9.26□□□□□ -0.93
PRKN-207ENST00000479615 ALKBH7Q9BT30 221 aaPredicted RBP9.26□□□□□ -0.93
PRKN-207ENST00000479615 C2orf82Q6UX34 121 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms